data_5MYN # _model_server_result.job_id m3WleyN1sv4KchnOQZ0uYQ _model_server_result.datetime_utc '2024-10-20 05:28:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5myn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5MYN # _exptl.entry_id 5MYN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 288.755 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-(5-chloranylpyridin-2-yl)-4-pyridin-2-yl-1,3-thiazol-2-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5MYN _cell.length_a 121.813 _cell.length_b 121.813 _cell.length_c 33.7 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MYN _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_554 -y,-x,-z-1/2 0 -1 0 -1 0 0 0 0 -1 0 0 -16.85 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C13 H9 Cl N4 S' _chem_comp.formula_weight 288.755 _chem_comp.id ZUF _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-(5-chloranylpyridin-2-yl)-4-pyridin-2-yl-1,3-thiazol-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL1 C16 ZUF sing 363 n n C17 C16 ZUF doub 364 n y C17 N18 ZUF sing 365 n y C16 C15 ZUF sing 366 n y N18 C13 ZUF doub 367 n y S09 C08 ZUF sing 368 n y S09 C10 ZUF sing 369 n y C08 C07 ZUF doub 370 n y C15 C14 ZUF doub 371 n y C13 C14 ZUF sing 372 n y C13 N12 ZUF sing 373 n n C10 N12 ZUF sing 374 n n C10 N11 ZUF doub 375 n y C06 C01 ZUF doub 376 n y C06 C05 ZUF sing 377 n y C07 N11 ZUF sing 378 n y C07 C05 ZUF sing 379 n n C01 C02 ZUF sing 380 n y C05 N04 ZUF doub 381 n y C02 C03 ZUF doub 382 n y N04 C03 ZUF sing 383 n y N12 H1 ZUF sing 384 n n C15 H2 ZUF sing 385 n n C17 H3 ZUF sing 386 n n C01 H4 ZUF sing 387 n n C02 H5 ZUF sing 388 n n C03 H6 ZUF sing 389 n n C06 H7 ZUF sing 390 n n C08 H8 ZUF sing 391 n n C14 H9 ZUF sing 392 n n # _atom_sites.entry_id 5MYN _atom_sites.fract_transf_matrix[1][1] 0.008209 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008209 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029674 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZUF A 1 301 1 ZUF LIG . C 3 HOH A 1 401 81 HOH HOH . C 3 HOH A 2 402 94 HOH HOH . C 3 HOH A 3 403 89 HOH HOH . C 3 HOH A 4 404 88 HOH HOH . C 3 HOH A 5 405 3 HOH HOH . C 3 HOH A 6 406 75 HOH HOH . C 3 HOH A 7 407 18 HOH HOH . C 3 HOH A 8 408 97 HOH HOH . C 3 HOH A 9 409 5 HOH HOH . C 3 HOH A 10 410 33 HOH HOH . C 3 HOH A 11 411 7 HOH HOH . C 3 HOH A 12 412 100 HOH HOH . C 3 HOH A 13 413 72 HOH HOH . C 3 HOH A 14 414 2 HOH HOH . C 3 HOH A 15 415 115 HOH HOH . C 3 HOH A 16 416 25 HOH HOH . C 3 HOH A 17 417 54 HOH HOH . C 3 HOH A 18 418 22 HOH HOH . C 3 HOH A 19 419 66 HOH HOH . C 3 HOH A 20 420 23 HOH HOH . C 3 HOH A 21 421 46 HOH HOH . C 3 HOH A 22 422 82 HOH HOH . C 3 HOH A 23 423 84 HOH HOH . C 3 HOH A 24 424 11 HOH HOH . C 3 HOH A 25 425 28 HOH HOH . C 3 HOH A 26 426 76 HOH HOH . C 3 HOH A 27 427 30 HOH HOH . C 3 HOH A 28 428 12 HOH HOH . C 3 HOH A 29 429 9 HOH HOH . C 3 HOH A 30 430 15 HOH HOH . C 3 HOH A 31 431 39 HOH HOH . C 3 HOH A 32 432 1 HOH HOH . C 3 HOH A 33 433 31 HOH HOH . C 3 HOH A 34 434 55 HOH HOH . C 3 HOH A 35 435 40 HOH HOH . C 3 HOH A 36 436 109 HOH HOH . C 3 HOH A 37 437 32 HOH HOH . C 3 HOH A 38 438 13 HOH HOH . C 3 HOH A 39 439 47 HOH HOH . C 3 HOH A 40 440 20 HOH HOH . C 3 HOH A 41 441 91 HOH HOH . C 3 HOH A 42 442 57 HOH HOH . C 3 HOH A 43 443 6 HOH HOH . C 3 HOH A 44 444 21 HOH HOH . C 3 HOH A 45 445 14 HOH HOH . C 3 HOH A 46 446 19 HOH HOH . C 3 HOH A 47 447 104 HOH HOH . C 3 HOH A 48 448 59 HOH HOH . C 3 HOH A 49 449 41 HOH HOH . C 3 HOH A 50 450 80 HOH HOH . C 3 HOH A 51 451 24 HOH HOH . C 3 HOH A 52 452 36 HOH HOH . C 3 HOH A 53 453 34 HOH HOH . C 3 HOH A 54 454 73 HOH HOH . C 3 HOH A 55 455 101 HOH HOH . C 3 HOH A 56 456 52 HOH HOH . C 3 HOH A 57 457 17 HOH HOH . C 3 HOH A 58 458 98 HOH HOH . C 3 HOH A 59 459 61 HOH HOH . C 3 HOH A 60 460 37 HOH HOH . C 3 HOH A 61 461 35 HOH HOH . C 3 HOH A 62 462 70 HOH HOH . C 3 HOH A 63 463 4 HOH HOH . C 3 HOH A 64 464 65 HOH HOH . C 3 HOH A 65 465 27 HOH HOH . C 3 HOH A 66 466 48 HOH HOH . C 3 HOH A 67 467 8 HOH HOH . C 3 HOH A 68 468 10 HOH HOH . C 3 HOH A 69 469 50 HOH HOH . C 3 HOH A 70 470 95 HOH HOH . C 3 HOH A 71 471 53 HOH HOH . C 3 HOH A 72 472 43 HOH HOH . C 3 HOH A 73 473 111 HOH HOH . C 3 HOH A 74 474 16 HOH HOH . C 3 HOH A 75 475 26 HOH HOH . C 3 HOH A 76 476 105 HOH HOH . C 3 HOH A 77 477 58 HOH HOH . C 3 HOH A 78 478 63 HOH HOH . C 3 HOH A 79 479 29 HOH HOH . C 3 HOH A 80 480 42 HOH HOH . C 3 HOH A 81 481 74 HOH HOH . C 3 HOH A 82 482 62 HOH HOH . C 3 HOH A 83 483 119 HOH HOH . C 3 HOH A 84 484 51 HOH HOH . C 3 HOH A 85 485 60 HOH HOH . C 3 HOH A 86 486 108 HOH HOH . C 3 HOH A 87 487 78 HOH HOH . C 3 HOH A 88 488 79 HOH HOH . C 3 HOH A 89 489 83 HOH HOH . C 3 HOH A 90 490 87 HOH HOH . C 3 HOH A 91 491 92 HOH HOH . C 3 HOH A 92 492 118 HOH HOH . C 3 HOH A 93 493 77 HOH HOH . C 3 HOH A 94 494 107 HOH HOH . C 3 HOH A 95 495 64 HOH HOH . C 3 HOH A 96 496 96 HOH HOH . C 3 HOH A 97 497 106 HOH HOH . C 3 HOH A 98 498 49 HOH HOH . C 3 HOH A 99 499 117 HOH HOH . C 3 HOH A 100 500 112 HOH HOH . C 3 HOH A 101 501 103 HOH HOH . C 3 HOH A 102 502 85 HOH HOH . C 3 HOH A 103 503 68 HOH HOH . C 3 HOH A 104 504 102 HOH HOH . C 3 HOH A 105 505 86 HOH HOH . C 3 HOH A 106 506 99 HOH HOH . C 3 HOH A 107 507 44 HOH HOH . C 3 HOH A 108 508 90 HOH HOH . C 3 HOH A 109 509 69 HOH HOH . C 3 HOH A 110 510 45 HOH HOH . C 3 HOH A 111 511 93 HOH HOH . C 3 HOH A 112 512 38 HOH HOH . C 3 HOH A 113 513 56 HOH HOH . C 3 HOH A 114 514 67 HOH HOH . C 3 HOH A 115 515 120 HOH HOH . C 3 HOH A 116 516 71 HOH HOH . C 3 HOH A 117 517 116 HOH HOH . C 3 HOH A 118 518 113 HOH HOH . C 3 HOH A 119 519 114 HOH HOH . C 3 HOH A 120 520 110 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 ZUF . . . B 2 -27.948 12.228 -5.397 1 42.61 ? C10 ZUF 301 A 1 HETATM 2 N N12 ZUF . . . B 2 -28.235 13.569 -4.926 1 42.73 ? N12 ZUF 301 A 1 HETATM 3 C C13 ZUF . . . B 2 -28.88 14.548 -5.777 1 38.33 ? C13 ZUF 301 A 1 HETATM 4 C C15 ZUF . . . B 2 -30.177 16.556 -5.963 1 33.62 ? C15 ZUF 301 A 1 HETATM 5 C C17 ZUF . . . B 2 -29.423 15.32 -7.878 1 31.62 ? C17 ZUF 301 A 1 HETATM 6 C C01 ZUF . . . B 2 -26.879 6.463 -4.662 1 40.76 ? C01 ZUF 301 A 1 HETATM 7 C C02 ZUF . . . B 2 -26.646 6.494 -3.297 1 44.34 ? C02 ZUF 301 A 1 HETATM 8 C C03 ZUF . . . B 2 -26.7 7.711 -2.629 1 40.19 ? C03 ZUF 301 A 1 HETATM 9 N N04 ZUF . . . B 2 -26.981 8.844 -3.261 1 37.9 ? N04 ZUF 301 A 1 HETATM 10 C C05 ZUF . . . B 2 -27.229 8.85 -4.559 1 34.75 ? C05 ZUF 301 A 1 HETATM 11 C C06 ZUF . . . B 2 -27.163 7.668 -5.281 1 33.68 ? C06 ZUF 301 A 1 HETATM 12 C C07 ZUF . . . B 2 -27.491 10.029 -5.238 1 41.11 ? C07 ZUF 301 A 1 HETATM 13 C C08 ZUF . . . B 2 -27.461 10.06 -6.619 1 38.08 ? C08 ZUF 301 A 1 HETATM 14 S S09 ZUF . . . B 2 -27.801 11.701 -7.044 1 37.53 ? S09 ZUF 301 A 1 HETATM 15 N N11 ZUF . . . B 2 -27.741 11.172 -4.629 1 40.35 ? N11 ZUF 301 A 1 HETATM 16 C C14 ZUF . . . B 2 -29.55 15.603 -5.189 1 33.26 ? C14 ZUF 301 A 1 HETATM 17 C C16 ZUF . . . B 2 -30.103 16.387 -7.329 1 30.5 ? C16 ZUF 301 A 1 HETATM 18 N N18 ZUF . . . B 2 -28.833 14.445 -7.093 1 34.36 ? N18 ZUF 301 A 1 HETATM 19 CL CL1 ZUF . . . B 2 -30.892 17.555 -8.392 1 33.95 ? CL1 ZUF 301 A 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 19 #