data_5MYT # _model_server_result.job_id v3-9HDW-jXqHHw9RgUqFEA _model_server_result.datetime_utc '2024-11-21 23:46:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5myt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5MYT # _exptl.entry_id 5MYT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 327.424 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-methylsulfanyl-~{N}-(4-pyridin-2-yl-1,3-thiazol-2-yl)benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5MYT _cell.length_a 121.167 _cell.length_b 121.167 _cell.length_c 33.716 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MYT _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H13 N3 O S2' _chem_comp.formula_weight 327.424 _chem_comp.id ZQC _chem_comp.mon_nstd_flag . _chem_comp.name 4-methylsulfanyl-~{N}-(4-pyridin-2-yl-1,3-thiazol-2-yl)benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S20 C17 ZQC sing 363 n n S20 C21 ZQC sing 364 n n C03 N04 ZQC doub 365 n y C03 C02 ZQC sing 366 n y C16 C15 ZQC doub 367 n y C16 C17 ZQC sing 368 n y N04 C05 ZQC sing 369 n y C15 C14 ZQC sing 370 n y C17 C18 ZQC doub 371 n y C02 C01 ZQC doub 372 n y N11 C10 ZQC doub 373 n y N11 C07 ZQC sing 374 n y C05 C07 ZQC sing 375 n n C05 C06 ZQC doub 376 n y N12 C10 ZQC sing 377 n n N12 C13 ZQC sing 378 n n C14 C13 ZQC sing 379 n n C14 C19 ZQC doub 380 n y C18 C19 ZQC sing 381 n y C01 C06 ZQC sing 382 n y C10 S09 ZQC sing 383 n y C07 C08 ZQC doub 384 n y C13 O22 ZQC doub 385 n n C08 S09 ZQC sing 386 n y N12 H1 ZQC sing 387 n n C15 H2 ZQC sing 388 n n C21 H3 ZQC sing 389 n n C21 H4 ZQC sing 390 n n C21 H5 ZQC sing 391 n n C01 H6 ZQC sing 392 n n C02 H7 ZQC sing 393 n n C03 H8 ZQC sing 394 n n C06 H9 ZQC sing 395 n n C08 H10 ZQC sing 396 n n C16 H11 ZQC sing 397 n n C18 H12 ZQC sing 398 n n C19 H13 ZQC sing 399 n n # _atom_sites.entry_id 5MYT _atom_sites.fract_transf_matrix[1][1] 0.008253 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008253 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02966 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZQC A 1 301 1 ZQC LIG . C 3 HOH A 1 401 85 HOH HOH . C 3 HOH A 2 402 12 HOH HOH . C 3 HOH A 3 403 28 HOH HOH . C 3 HOH A 4 404 87 HOH HOH . C 3 HOH A 5 405 96 HOH HOH . C 3 HOH A 6 406 57 HOH HOH . C 3 HOH A 7 407 62 HOH HOH . C 3 HOH A 8 408 5 HOH HOH . C 3 HOH A 9 409 63 HOH HOH . C 3 HOH A 10 410 72 HOH HOH . C 3 HOH A 11 411 17 HOH HOH . C 3 HOH A 12 412 91 HOH HOH . C 3 HOH A 13 413 32 HOH HOH . C 3 HOH A 14 414 6 HOH HOH . C 3 HOH A 15 415 35 HOH HOH . C 3 HOH A 16 416 14 HOH HOH . C 3 HOH A 17 417 88 HOH HOH . C 3 HOH A 18 418 29 HOH HOH . C 3 HOH A 19 419 11 HOH HOH . C 3 HOH A 20 420 79 HOH HOH . C 3 HOH A 21 421 64 HOH HOH . C 3 HOH A 22 422 43 HOH HOH . C 3 HOH A 23 423 2 HOH HOH . C 3 HOH A 24 424 111 HOH HOH . C 3 HOH A 25 425 110 HOH HOH . C 3 HOH A 26 426 24 HOH HOH . C 3 HOH A 27 427 10 HOH HOH . C 3 HOH A 28 428 1 HOH HOH . C 3 HOH A 29 429 76 HOH HOH . C 3 HOH A 30 430 67 HOH HOH . C 3 HOH A 31 431 23 HOH HOH . C 3 HOH A 32 432 55 HOH HOH . C 3 HOH A 33 433 45 HOH HOH . C 3 HOH A 34 434 8 HOH HOH . C 3 HOH A 35 435 20 HOH HOH . C 3 HOH A 36 436 49 HOH HOH . C 3 HOH A 37 437 40 HOH HOH . C 3 HOH A 38 438 48 HOH HOH . C 3 HOH A 39 439 105 HOH HOH . C 3 HOH A 40 440 101 HOH HOH . C 3 HOH A 41 441 52 HOH HOH . C 3 HOH A 42 442 9 HOH HOH . C 3 HOH A 43 443 38 HOH HOH . C 3 HOH A 44 444 47 HOH HOH . C 3 HOH A 45 445 50 HOH HOH . C 3 HOH A 46 446 86 HOH HOH . C 3 HOH A 47 447 102 HOH HOH . C 3 HOH A 48 448 13 HOH HOH . C 3 HOH A 49 449 36 HOH HOH . C 3 HOH A 50 450 19 HOH HOH . C 3 HOH A 51 451 21 HOH HOH . C 3 HOH A 52 452 31 HOH HOH . C 3 HOH A 53 453 109 HOH HOH . C 3 HOH A 54 454 33 HOH HOH . C 3 HOH A 55 455 3 HOH HOH . C 3 HOH A 56 456 4 HOH HOH . C 3 HOH A 57 457 44 HOH HOH . C 3 HOH A 58 458 46 HOH HOH . C 3 HOH A 59 459 78 HOH HOH . C 3 HOH A 60 460 95 HOH HOH . C 3 HOH A 61 461 59 HOH HOH . C 3 HOH A 62 462 27 HOH HOH . C 3 HOH A 63 463 80 HOH HOH . C 3 HOH A 64 464 92 HOH HOH . C 3 HOH A 65 465 34 HOH HOH . C 3 HOH A 66 466 74 HOH HOH . C 3 HOH A 67 467 15 HOH HOH . C 3 HOH A 68 468 107 HOH HOH . C 3 HOH A 69 469 98 HOH HOH . C 3 HOH A 70 470 18 HOH HOH . C 3 HOH A 71 471 7 HOH HOH . C 3 HOH A 72 472 39 HOH HOH . C 3 HOH A 73 473 114 HOH HOH . C 3 HOH A 74 474 42 HOH HOH . C 3 HOH A 75 475 73 HOH HOH . C 3 HOH A 76 476 103 HOH HOH . C 3 HOH A 77 477 16 HOH HOH . C 3 HOH A 78 478 53 HOH HOH . C 3 HOH A 79 479 112 HOH HOH . C 3 HOH A 80 480 93 HOH HOH . C 3 HOH A 81 481 26 HOH HOH . C 3 HOH A 82 482 41 HOH HOH . C 3 HOH A 83 483 69 HOH HOH . C 3 HOH A 84 484 104 HOH HOH . C 3 HOH A 85 485 81 HOH HOH . C 3 HOH A 86 486 99 HOH HOH . C 3 HOH A 87 487 83 HOH HOH . C 3 HOH A 88 488 97 HOH HOH . C 3 HOH A 89 489 82 HOH HOH . C 3 HOH A 90 490 100 HOH HOH . C 3 HOH A 91 491 106 HOH HOH . C 3 HOH A 92 492 71 HOH HOH . C 3 HOH A 93 493 94 HOH HOH . C 3 HOH A 94 494 22 HOH HOH . C 3 HOH A 95 495 60 HOH HOH . C 3 HOH A 96 496 84 HOH HOH . C 3 HOH A 97 497 30 HOH HOH . C 3 HOH A 98 498 56 HOH HOH . C 3 HOH A 99 499 37 HOH HOH . C 3 HOH A 100 500 65 HOH HOH . C 3 HOH A 101 501 51 HOH HOH . C 3 HOH A 102 502 75 HOH HOH . C 3 HOH A 103 503 25 HOH HOH . C 3 HOH A 104 504 61 HOH HOH . C 3 HOH A 105 505 89 HOH HOH . C 3 HOH A 106 506 66 HOH HOH . C 3 HOH A 107 507 54 HOH HOH . C 3 HOH A 108 508 58 HOH HOH . C 3 HOH A 109 509 70 HOH HOH . C 3 HOH A 110 510 68 HOH HOH . C 3 HOH A 111 511 108 HOH HOH . C 3 HOH A 112 512 113 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 ZQC . . . B 2 -29.589 -15.664 -2.112 1 36.33 ? C10 ZQC 301 A 1 HETATM 2 N N12 ZQC . . . B 2 -28.948 -14.478 -2.614 1 32.47 ? N12 ZQC 301 A 1 HETATM 3 C C13 ZQC . . . B 2 -28.151 -13.581 -1.792 1 40.39 ? C13 ZQC 301 A 1 HETATM 4 C C15 ZQC . . . B 2 -28.055 -12.149 -3.813 1 45 ? C15 ZQC 301 A 1 HETATM 5 C C17 ZQC . . . B 2 -27.173 -9.953 -3.735 1 34.85 ? C17 ZQC 301 A 1 HETATM 6 C C21 ZQC . . . B 2 -26.495 -7.152 -3.315 1 38.43 ? C21 ZQC 301 A 1 HETATM 7 C C01 ZQC . . . B 2 -33.83 -19.809 -2.339 1 49.62 ? C01 ZQC 301 A 1 HETATM 8 C C02 ZQC . . . B 2 -34.02 -19.799 -3.706 1 58.03 ? C02 ZQC 301 A 1 HETATM 9 C C03 ZQC . . . B 2 -33.22 -18.984 -4.482 1 63.81 ? C03 ZQC 301 A 1 HETATM 10 N N04 ZQC . . . B 2 -32.272 -18.237 -3.935 1 68.25 ? N04 ZQC 301 A 1 HETATM 11 C C05 ZQC . . . B 2 -32.015 -18.246 -2.637 1 54.92 ? C05 ZQC 301 A 1 HETATM 12 C C06 ZQC . . . B 2 -32.822 -19.019 -1.826 1 47.76 ? C06 ZQC 301 A 1 HETATM 13 C C07 ZQC . . . B 2 -31.044 -17.41 -2.061 1 50.66 ? C07 ZQC 301 A 1 HETATM 14 C C08 ZQC . . . B 2 -30.645 -17.507 -0.728 1 42.97 ? C08 ZQC 301 A 1 HETATM 15 S S09 ZQC . . . B 2 -29.516 -16.209 -0.483 1 37.11 ? S09 ZQC 301 A 1 HETATM 16 N N11 ZQC . . . B 2 -30.497 -16.405 -2.735 1 41.78 ? N11 ZQC 301 A 1 HETATM 17 C C14 ZQC . . . B 2 -27.732 -12.296 -2.475 1 45.09 ? C14 ZQC 301 A 1 HETATM 18 C C16 ZQC . . . B 2 -27.751 -10.974 -4.459 1 38.43 ? C16 ZQC 301 A 1 HETATM 19 C C18 ZQC . . . B 2 -26.887 -10.073 -2.383 1 33.49 ? C18 ZQC 301 A 1 HETATM 20 C C19 ZQC . . . B 2 -27.191 -11.255 -1.741 1 38.52 ? C19 ZQC 301 A 1 HETATM 21 S S20 ZQC . . . B 2 -26.776 -8.423 -4.579 1 40.26 ? S20 ZQC 301 A 1 HETATM 22 O O22 ZQC . . . B 2 -27.898 -13.767 -0.645 1 35.58 ? O22 ZQC 301 A 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 22 #