data_5MZR # _model_server_result.job_id CuFuS8Um5YeiAr8bUf2W9A _model_server_result.datetime_utc '2024-11-14 17:13:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5mzr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"HA","auth_seq_id":409}' # _entry.id 5MZR # _exptl.entry_id 5MZR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 178.271 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,6-BIS(1-METHYLETHYL)PHENOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.83 _cell.angle_gamma 90 _cell.entry_id 5MZR _cell.length_a 182.842 _cell.length_b 132.989 _cell.length_c 161.162 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MZR _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 Q N N ? 7 HA N N ? 7 RA N N ? 7 AB N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O PRO 68 A PRO 68 1_555 L NA NA . A NA 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.111 ? metalc ? metalc2 A O ILE 71 A ILE 71 1_555 L NA NA . A NA 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? metalc ? metalc3 B O PRO 68 B PRO 68 1_555 W NA NA . B NA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.968 ? metalc ? metalc4 B O ILE 71 B ILE 71 1_555 W NA NA . B NA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc5 C O ILE 71 C ILE 71 1_555 EA NA NA . C NA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.68 ? metalc ? metalc6 D O ILE 71 D ILE 71 1_555 NA NA NA . D NA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? metalc ? metalc7 E O ILE 71 E ILE 71 1_555 XA NA NA . E NA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.751 ? # _chem_comp.formula 'C12 H18 O' _chem_comp.formula_weight 178.271 _chem_comp.id PFL _chem_comp.mon_nstd_flag . _chem_comp.name 2,6-BIS(1-METHYLETHYL)PHENOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 2,6-DIISOPROPYLPHENOL;PROPOFOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PFL sing 325 n n O1 HO1 PFL sing 326 n n C1 C2 PFL doub 327 n y C1 C6 PFL sing 328 n y C2 C3 PFL sing 329 n y C2 C7 PFL sing 330 n n C6 C5 PFL doub 331 n y C6 C10 PFL sing 332 n n C3 C4 PFL doub 333 n y C3 HC3 PFL sing 334 n n C7 C8 PFL sing 335 n n C7 C9 PFL sing 336 n n C7 HC7 PFL sing 337 n n C4 C5 PFL sing 338 n y C4 HC4 PFL sing 339 n n C5 HC5 PFL sing 340 n n C10 C11 PFL sing 341 n n C10 C12 PFL sing 342 n n C10 H10 PFL sing 343 n n C8 H81 PFL sing 344 n n C8 H82 PFL sing 345 n n C8 H83 PFL sing 346 n n C9 H91 PFL sing 347 n n C9 H92 PFL sing 348 n n C9 H93 PFL sing 349 n n C11 H111 PFL sing 350 n n C11 H112 PFL sing 351 n n C11 H113 PFL sing 352 n n C12 H121 PFL sing 353 n n C12 H122 PFL sing 354 n n C12 H123 PFL sing 355 n n # _atom_sites.entry_id 5MZR _atom_sites.fract_transf_matrix[1][1] 0.005469 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001246 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007519 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006364 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 PLC A 1 401 402 PLC PLC . G 2 PLC A 1 402 403 PLC PLC . H 2 PLC A 1 403 404 PLC PLC . I 3 CL A 1 404 405 CL CL . J 3 CL A 1 405 406 CL CL . K 3 CL A 1 406 407 CL CL . L 4 NA A 1 407 408 NA NA . M 5 ACT A 1 408 410 ACT ACT . N 6 LMT A 1 409 411 LMT LMT . O 6 LMT A 1 410 412 LMT LMT . P 5 ACT A 1 411 401 ACT ACT . Q 7 PFL A 1 412 4 PFL PFL . R 4 NA B 1 401 409 NA NA . S 2 PLC B 1 402 402 PLC PLC . T 2 PLC B 1 403 403 PLC PLC . U 2 PLC B 1 404 404 PLC PLC . V 3 CL B 1 405 405 CL CL . W 4 NA B 1 406 406 NA NA . X 5 ACT B 1 407 407 ACT ACT . Y 6 LMT B 1 408 408 LMT LMT . Z 5 ACT C 1 401 401 ACT ACT . AA 2 PLC C 1 402 402 PLC PLC . BA 2 PLC C 1 403 403 PLC PLC . CA 2 PLC C 1 404 404 PLC PLC . DA 3 CL C 1 405 405 CL CL . EA 4 NA C 1 406 406 NA NA . FA 5 ACT C 1 407 407 ACT ACT . GA 6 LMT C 1 408 408 LMT LMT . HA 7 PFL C 1 409 1 PFL PFL . IA 5 ACT D 1 401 401 ACT ACT . JA 2 PLC D 1 402 402 PLC PLC . KA 2 PLC D 1 403 403 PLC PLC . LA 2 PLC D 1 404 404 PLC PLC . MA 3 CL D 1 405 405 CL CL . NA 4 NA D 1 406 406 NA NA . OA 5 ACT D 1 407 407 ACT ACT . PA 6 LMT D 1 408 408 LMT LMT . QA 5 ACT D 1 409 401 ACT ACT . RA 7 PFL D 1 410 2 PFL PFL . SA 5 ACT E 1 401 401 ACT ACT . TA 2 PLC E 1 402 402 PLC PLC . UA 2 PLC E 1 403 403 PLC PLC . VA 2 PLC E 1 404 404 PLC PLC . WA 3 CL E 1 405 405 CL CL . XA 4 NA E 1 406 406 NA NA . YA 5 ACT E 1 407 407 ACT ACT . ZA 6 LMT E 1 408 408 LMT LMT . AB 7 PFL E 1 409 3 PFL PFL . BB 8 HOH A 1 501 530 HOH HOH . BB 8 HOH A 2 502 556 HOH HOH . BB 8 HOH A 3 503 587 HOH HOH . BB 8 HOH A 4 504 43 HOH HOH . BB 8 HOH A 5 505 570 HOH HOH . BB 8 HOH A 6 506 10 HOH HOH . BB 8 HOH A 7 507 18 HOH HOH . BB 8 HOH A 8 508 569 HOH HOH . BB 8 HOH A 9 509 593 HOH HOH . BB 8 HOH A 10 510 586 HOH HOH . BB 8 HOH A 11 511 609 HOH HOH . BB 8 HOH A 12 512 566 HOH HOH . BB 8 HOH A 13 513 37 HOH HOH . BB 8 HOH A 14 514 544 HOH HOH . BB 8 HOH A 15 515 504 HOH HOH . BB 8 HOH A 16 516 573 HOH HOH . BB 8 HOH A 17 517 552 HOH HOH . BB 8 HOH A 18 518 551 HOH HOH . BB 8 HOH A 19 519 538 HOH HOH . BB 8 HOH A 20 520 522 HOH HOH . BB 8 HOH A 21 521 25 HOH HOH . BB 8 HOH A 22 522 47 HOH HOH . BB 8 HOH A 23 523 574 HOH HOH . BB 8 HOH A 24 524 515 HOH HOH . BB 8 HOH A 25 525 568 HOH HOH . BB 8 HOH A 26 526 579 HOH HOH . BB 8 HOH A 27 527 572 HOH HOH . BB 8 HOH A 28 528 565 HOH HOH . BB 8 HOH A 29 529 545 HOH HOH . BB 8 HOH A 30 530 595 HOH HOH . BB 8 HOH A 31 531 539 HOH HOH . BB 8 HOH A 32 532 571 HOH HOH . BB 8 HOH A 33 533 503 HOH HOH . BB 8 HOH A 34 534 517 HOH HOH . BB 8 HOH A 35 535 567 HOH HOH . BB 8 HOH A 36 536 608 HOH HOH . BB 8 HOH A 37 537 2 HOH HOH . CB 8 HOH B 1 501 531 HOH HOH . CB 8 HOH B 2 502 32 HOH HOH . CB 8 HOH B 3 503 551 HOH HOH . CB 8 HOH B 4 504 513 HOH HOH . CB 8 HOH B 5 505 39 HOH HOH . CB 8 HOH B 6 506 590 HOH HOH . CB 8 HOH B 7 507 20 HOH HOH . CB 8 HOH B 8 508 46 HOH HOH . CB 8 HOH B 9 509 560 HOH HOH . CB 8 HOH B 10 510 528 HOH HOH . CB 8 HOH B 11 511 24 HOH HOH . CB 8 HOH B 12 512 535 HOH HOH . CB 8 HOH B 13 513 26 HOH HOH . CB 8 HOH B 14 514 540 HOH HOH . CB 8 HOH B 15 515 12 HOH HOH . CB 8 HOH B 16 516 19 HOH HOH . CB 8 HOH B 17 517 529 HOH HOH . CB 8 HOH B 18 518 547 HOH HOH . CB 8 HOH B 19 519 22 HOH HOH . CB 8 HOH B 20 520 512 HOH HOH . CB 8 HOH B 21 521 615 HOH HOH . CB 8 HOH B 22 522 530 HOH HOH . CB 8 HOH B 23 523 541 HOH HOH . CB 8 HOH B 24 524 42 HOH HOH . CB 8 HOH B 25 525 578 HOH HOH . CB 8 HOH B 26 526 598 HOH HOH . CB 8 HOH B 27 527 562 HOH HOH . CB 8 HOH B 28 528 578 HOH HOH . CB 8 HOH B 29 529 621 HOH HOH . CB 8 HOH B 30 530 548 HOH HOH . CB 8 HOH B 31 531 41 HOH HOH . CB 8 HOH B 32 532 550 HOH HOH . CB 8 HOH B 33 533 561 HOH HOH . CB 8 HOH B 34 534 579 HOH HOH . CB 8 HOH B 35 535 516 HOH HOH . CB 8 HOH B 36 536 38 HOH HOH . CB 8 HOH B 37 537 559 HOH HOH . CB 8 HOH B 38 538 33 HOH HOH . CB 8 HOH B 39 539 3 HOH HOH . DB 8 HOH C 1 501 564 HOH HOH . DB 8 HOH C 2 502 555 HOH HOH . DB 8 HOH C 3 503 538 HOH HOH . DB 8 HOH C 4 504 13 HOH HOH . DB 8 HOH C 5 505 510 HOH HOH . DB 8 HOH C 6 506 11 HOH HOH . DB 8 HOH C 7 507 44 HOH HOH . DB 8 HOH C 8 508 567 HOH HOH . DB 8 HOH C 9 509 570 HOH HOH . DB 8 HOH C 10 510 550 HOH HOH . DB 8 HOH C 11 511 547 HOH HOH . DB 8 HOH C 12 512 592 HOH HOH . DB 8 HOH C 13 513 584 HOH HOH . DB 8 HOH C 14 514 28 HOH HOH . DB 8 HOH C 15 515 521 HOH HOH . DB 8 HOH C 16 516 549 HOH HOH . DB 8 HOH C 17 517 553 HOH HOH . DB 8 HOH C 18 518 21 HOH HOH . DB 8 HOH C 19 519 509 HOH HOH . DB 8 HOH C 20 520 546 HOH HOH . DB 8 HOH C 21 521 580 HOH HOH . DB 8 HOH C 22 522 34 HOH HOH . DB 8 HOH C 23 523 7 HOH HOH . DB 8 HOH C 24 524 538 HOH HOH . DB 8 HOH C 25 525 4 HOH HOH . EB 8 HOH D 1 501 554 HOH HOH . EB 8 HOH D 2 502 23 HOH HOH . EB 8 HOH D 3 503 512 HOH HOH . EB 8 HOH D 4 504 8 HOH HOH . EB 8 HOH D 5 505 553 HOH HOH . EB 8 HOH D 6 506 573 HOH HOH . EB 8 HOH D 7 507 45 HOH HOH . EB 8 HOH D 8 508 35 HOH HOH . EB 8 HOH D 9 509 30 HOH HOH . EB 8 HOH D 10 510 568 HOH HOH . EB 8 HOH D 11 511 526 HOH HOH . EB 8 HOH D 12 512 575 HOH HOH . EB 8 HOH D 13 513 577 HOH HOH . EB 8 HOH D 14 514 540 HOH HOH . EB 8 HOH D 15 515 539 HOH HOH . EB 8 HOH D 16 516 582 HOH HOH . EB 8 HOH D 17 517 525 HOH HOH . EB 8 HOH D 18 518 548 HOH HOH . EB 8 HOH D 19 519 31 HOH HOH . EB 8 HOH D 20 520 519 HOH HOH . EB 8 HOH D 21 521 29 HOH HOH . EB 8 HOH D 22 522 559 HOH HOH . EB 8 HOH D 23 523 542 HOH HOH . EB 8 HOH D 24 524 585 HOH HOH . EB 8 HOH D 25 525 560 HOH HOH . EB 8 HOH D 26 526 543 HOH HOH . EB 8 HOH D 27 527 581 HOH HOH . EB 8 HOH D 28 528 5 HOH HOH . FB 8 HOH E 1 501 558 HOH HOH . FB 8 HOH E 2 502 553 HOH HOH . FB 8 HOH E 3 503 513 HOH HOH . FB 8 HOH E 4 504 522 HOH HOH . FB 8 HOH E 5 505 573 HOH HOH . FB 8 HOH E 6 506 524 HOH HOH . FB 8 HOH E 7 507 555 HOH HOH . FB 8 HOH E 8 508 40 HOH HOH . FB 8 HOH E 9 509 9 HOH HOH . FB 8 HOH E 10 510 16 HOH HOH . FB 8 HOH E 11 511 528 HOH HOH . FB 8 HOH E 12 512 526 HOH HOH . FB 8 HOH E 13 513 15 HOH HOH . FB 8 HOH E 14 514 578 HOH HOH . FB 8 HOH E 15 515 562 HOH HOH . FB 8 HOH E 16 516 17 HOH HOH . FB 8 HOH E 17 517 580 HOH HOH . FB 8 HOH E 18 518 602 HOH HOH . FB 8 HOH E 19 519 541 HOH HOH . FB 8 HOH E 20 520 566 HOH HOH . FB 8 HOH E 21 521 27 HOH HOH . FB 8 HOH E 22 522 571 HOH HOH . FB 8 HOH E 23 523 530 HOH HOH . FB 8 HOH E 24 524 557 HOH HOH . FB 8 HOH E 25 525 570 HOH HOH . FB 8 HOH E 26 526 557 HOH HOH . FB 8 HOH E 27 527 538 HOH HOH . FB 8 HOH E 28 528 36 HOH HOH . FB 8 HOH E 29 529 577 HOH HOH . FB 8 HOH E 30 530 6 HOH HOH . FB 8 HOH E 31 531 1 HOH HOH . FB 8 HOH E 32 532 560 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PFL . . . HA 7 52.454 -47.224 41.309 0.7 87.64 ? O1 PFL 409 C 1 HETATM 2 C C1 PFL . . . HA 7 51.96 -46.511 42.352 0.7 84.82 ? C1 PFL 409 C 1 HETATM 3 C C2 PFL . . . HA 7 51.682 -45.163 42.133 0.7 83.16 ? C2 PFL 409 C 1 HETATM 4 C C6 PFL . . . HA 7 51.878 -47.086 43.623 0.7 82.37 ? C6 PFL 409 C 1 HETATM 5 C C3 PFL . . . HA 7 51.481 -44.349 43.25 0.7 84.97 ? C3 PFL 409 C 1 HETATM 6 C C7 PFL . . . HA 7 51.406 -44.676 40.721 0.7 80.7 ? C7 PFL 409 C 1 HETATM 7 C C4 PFL . . . HA 7 51.527 -44.878 44.534 0.7 81.87 ? C4 PFL 409 C 1 HETATM 8 C C5 PFL . . . HA 7 51.713 -46.239 44.72 0.7 81.46 ? C5 PFL 409 C 1 HETATM 9 C C10 PFL . . . HA 7 51.656 -48.583 43.749 0.7 79.7 ? C10 PFL 409 C 1 HETATM 10 C C8 PFL . . . HA 7 50.041 -44.03 40.582 0.7 81.47 ? C8 PFL 409 C 1 HETATM 11 C C9 PFL . . . HA 7 52.481 -43.741 40.187 0.7 83.6 ? C9 PFL 409 C 1 HETATM 12 C C11 PFL . . . HA 7 52.295 -49.174 45 0.7 82.18 ? C11 PFL 409 C 1 HETATM 13 C C12 PFL . . . HA 7 50.174 -48.918 43.694 0.7 77.09 ? C12 PFL 409 C 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #