data_5N0N # _model_server_result.job_id phnEqzyQ5N6BhV1OMHOUSw _model_server_result.datetime_utc '2025-03-09 05:52:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5n0n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 5N0N # _exptl.entry_id 5N0N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5N0N _cell.length_a 87.304 _cell.length_b 93.664 _cell.length_c 165.331 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5N0N _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_395 -x-2,-y+4,z -1 0 0 0 -1 0 0 0 1 -174.608 374.656 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 173 A GLY 174 1_555 A N CSO 174 A CSO 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale2 A C CSO 174 A CSO 175 1_555 A N VAL 175 A VAL 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 A C TRP 399 A TRP 400 1_555 A N MVA 400 A MVA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale4 A C MVA 400 A MVA 401 1_555 A N ILE 401 A ILE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale5 A C ILE 401 A ILE 402 1_555 A N MVA 402 A MVA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale6 A C MVA 402 A MVA 403 1_555 A N VAL 403 A VAL 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? metalc ? metalc1 A O GLY 15 A GLY 16 1_555 E MG MG . A MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.698 ? metalc ? metalc2 D MG MG . A MG 503 1_555 F O HOH . A HOH 650 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? metalc ? metalc3 D MG MG . A MG 503 1_555 F O HOH . A HOH 774 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.754 ? metalc ? metalc4 E MG MG . A MG 504 1_555 F O HOH . A HOH 635 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.806 ? metalc ? metalc5 E MG MG . A MG 504 1_555 F O HOH . A HOH 728 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.974 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5N0N _atom_sites.fract_transf_matrix[1][1] 0.011454 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010676 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006048 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SAH A 1 501 501 SAH SAH . C 3 EDT A 1 502 1 EDT EDT . D 4 MG A 1 503 2 MG MG . E 4 MG A 1 504 3 MG MG . F 5 HOH A 1 601 96 HOH HOH . F 5 HOH A 2 602 158 HOH HOH . F 5 HOH A 3 603 161 HOH HOH . F 5 HOH A 4 604 236 HOH HOH . F 5 HOH A 5 605 153 HOH HOH . F 5 HOH A 6 606 180 HOH HOH . F 5 HOH A 7 607 104 HOH HOH . F 5 HOH A 8 608 154 HOH HOH . F 5 HOH A 9 609 136 HOH HOH . F 5 HOH A 10 610 23 HOH HOH . F 5 HOH A 11 611 241 HOH HOH . F 5 HOH A 12 612 47 HOH HOH . F 5 HOH A 13 613 238 HOH HOH . F 5 HOH A 14 614 223 HOH HOH . F 5 HOH A 15 615 132 HOH HOH . F 5 HOH A 16 616 74 HOH HOH . F 5 HOH A 17 617 29 HOH HOH . F 5 HOH A 18 618 20 HOH HOH . F 5 HOH A 19 619 89 HOH HOH . F 5 HOH A 20 620 91 HOH HOH . F 5 HOH A 21 621 72 HOH HOH . F 5 HOH A 22 622 152 HOH HOH . F 5 HOH A 23 623 31 HOH HOH . F 5 HOH A 24 624 18 HOH HOH . F 5 HOH A 25 625 73 HOH HOH . F 5 HOH A 26 626 151 HOH HOH . F 5 HOH A 27 627 202 HOH HOH . F 5 HOH A 28 628 184 HOH HOH . F 5 HOH A 29 629 194 HOH HOH . F 5 HOH A 30 630 86 HOH HOH . F 5 HOH A 31 631 217 HOH HOH . F 5 HOH A 32 632 219 HOH HOH . F 5 HOH A 33 633 30 HOH HOH . F 5 HOH A 34 634 124 HOH HOH . F 5 HOH A 35 635 8 HOH HOH . F 5 HOH A 36 636 122 HOH HOH . F 5 HOH A 37 637 225 HOH HOH . F 5 HOH A 38 638 228 HOH HOH . F 5 HOH A 39 639 247 HOH HOH . F 5 HOH A 40 640 2 HOH HOH . F 5 HOH A 41 641 123 HOH HOH . F 5 HOH A 42 642 12 HOH HOH . F 5 HOH A 43 643 34 HOH HOH . F 5 HOH A 44 644 61 HOH HOH . F 5 HOH A 45 645 192 HOH HOH . F 5 HOH A 46 646 84 HOH HOH . F 5 HOH A 47 647 131 HOH HOH . F 5 HOH A 48 648 26 HOH HOH . F 5 HOH A 49 649 229 HOH HOH . F 5 HOH A 50 650 139 HOH HOH . F 5 HOH A 51 651 109 HOH HOH . F 5 HOH A 52 652 76 HOH HOH . F 5 HOH A 53 653 157 HOH HOH . F 5 HOH A 54 654 115 HOH HOH . F 5 HOH A 55 655 14 HOH HOH . F 5 HOH A 56 656 63 HOH HOH . F 5 HOH A 57 657 167 HOH HOH . F 5 HOH A 58 658 250 HOH HOH . F 5 HOH A 59 659 36 HOH HOH . F 5 HOH A 60 660 62 HOH HOH . F 5 HOH A 61 661 52 HOH HOH . F 5 HOH A 62 662 126 HOH HOH . F 5 HOH A 63 663 178 HOH HOH . F 5 HOH A 64 664 195 HOH HOH . F 5 HOH A 65 665 81 HOH HOH . F 5 HOH A 66 666 242 HOH HOH . F 5 HOH A 67 667 16 HOH HOH . F 5 HOH A 68 668 125 HOH HOH . F 5 HOH A 69 669 17 HOH HOH . F 5 HOH A 70 670 54 HOH HOH . F 5 HOH A 71 671 220 HOH HOH . F 5 HOH A 72 672 37 HOH HOH . F 5 HOH A 73 673 88 HOH HOH . F 5 HOH A 74 674 182 HOH HOH . F 5 HOH A 75 675 196 HOH HOH . F 5 HOH A 76 676 79 HOH HOH . F 5 HOH A 77 677 41 HOH HOH . F 5 HOH A 78 678 28 HOH HOH . F 5 HOH A 79 679 114 HOH HOH . F 5 HOH A 80 680 98 HOH HOH . F 5 HOH A 81 681 233 HOH HOH . F 5 HOH A 82 682 105 HOH HOH . F 5 HOH A 83 683 121 HOH HOH . F 5 HOH A 84 684 119 HOH HOH . F 5 HOH A 85 685 70 HOH HOH . F 5 HOH A 86 686 179 HOH HOH . F 5 HOH A 87 687 10 HOH HOH . F 5 HOH A 88 688 9 HOH HOH . F 5 HOH A 89 689 166 HOH HOH . F 5 HOH A 90 690 147 HOH HOH . F 5 HOH A 91 691 11 HOH HOH . F 5 HOH A 92 692 203 HOH HOH . F 5 HOH A 93 693 27 HOH HOH . F 5 HOH A 94 694 50 HOH HOH . F 5 HOH A 95 695 97 HOH HOH . F 5 HOH A 96 696 159 HOH HOH . F 5 HOH A 97 697 204 HOH HOH . F 5 HOH A 98 698 6 HOH HOH . F 5 HOH A 99 699 64 HOH HOH . F 5 HOH A 100 700 160 HOH HOH . F 5 HOH A 101 701 7 HOH HOH . F 5 HOH A 102 702 15 HOH HOH . F 5 HOH A 103 703 58 HOH HOH . F 5 HOH A 104 704 57 HOH HOH . F 5 HOH A 105 705 165 HOH HOH . F 5 HOH A 106 706 106 HOH HOH . F 5 HOH A 107 707 205 HOH HOH . F 5 HOH A 108 708 237 HOH HOH . F 5 HOH A 109 709 43 HOH HOH . F 5 HOH A 110 710 231 HOH HOH . F 5 HOH A 111 711 172 HOH HOH . F 5 HOH A 112 712 99 HOH HOH . F 5 HOH A 113 713 32 HOH HOH . F 5 HOH A 114 714 156 HOH HOH . F 5 HOH A 115 715 24 HOH HOH . F 5 HOH A 116 716 113 HOH HOH . F 5 HOH A 117 717 206 HOH HOH . F 5 HOH A 118 718 102 HOH HOH . F 5 HOH A 119 719 257 HOH HOH . F 5 HOH A 120 720 221 HOH HOH . F 5 HOH A 121 721 60 HOH HOH . F 5 HOH A 122 722 150 HOH HOH . F 5 HOH A 123 723 56 HOH HOH . F 5 HOH A 124 724 68 HOH HOH . F 5 HOH A 125 725 21 HOH HOH . F 5 HOH A 126 726 189 HOH HOH . F 5 HOH A 127 727 13 HOH HOH . F 5 HOH A 128 728 5 HOH HOH . F 5 HOH A 129 729 3 HOH HOH . F 5 HOH A 130 730 1 HOH HOH . F 5 HOH A 131 731 80 HOH HOH . F 5 HOH A 132 732 46 HOH HOH . F 5 HOH A 133 733 176 HOH HOH . F 5 HOH A 134 734 19 HOH HOH . F 5 HOH A 135 735 38 HOH HOH . F 5 HOH A 136 736 254 HOH HOH . F 5 HOH A 137 737 118 HOH HOH . F 5 HOH A 138 738 55 HOH HOH . F 5 HOH A 139 739 33 HOH HOH . F 5 HOH A 140 740 110 HOH HOH . F 5 HOH A 141 741 235 HOH HOH . F 5 HOH A 142 742 40 HOH HOH . F 5 HOH A 143 743 44 HOH HOH . F 5 HOH A 144 744 25 HOH HOH . F 5 HOH A 145 745 42 HOH HOH . F 5 HOH A 146 746 83 HOH HOH . F 5 HOH A 147 747 66 HOH HOH . F 5 HOH A 148 748 117 HOH HOH . F 5 HOH A 149 749 87 HOH HOH . F 5 HOH A 150 750 149 HOH HOH . F 5 HOH A 151 751 171 HOH HOH . F 5 HOH A 152 752 207 HOH HOH . F 5 HOH A 153 753 251 HOH HOH . F 5 HOH A 154 754 100 HOH HOH . F 5 HOH A 155 755 133 HOH HOH . F 5 HOH A 156 756 112 HOH HOH . F 5 HOH A 157 757 4 HOH HOH . F 5 HOH A 158 758 78 HOH HOH . F 5 HOH A 159 759 108 HOH HOH . F 5 HOH A 160 760 93 HOH HOH . F 5 HOH A 161 761 22 HOH HOH . F 5 HOH A 162 762 94 HOH HOH . F 5 HOH A 163 763 116 HOH HOH . F 5 HOH A 164 764 211 HOH HOH . F 5 HOH A 165 765 222 HOH HOH . F 5 HOH A 166 766 130 HOH HOH . F 5 HOH A 167 767 59 HOH HOH . F 5 HOH A 168 768 111 HOH HOH . F 5 HOH A 169 769 85 HOH HOH . F 5 HOH A 170 770 170 HOH HOH . F 5 HOH A 171 771 51 HOH HOH . F 5 HOH A 172 772 259 HOH HOH . F 5 HOH A 173 773 120 HOH HOH . F 5 HOH A 174 774 75 HOH HOH . F 5 HOH A 175 775 140 HOH HOH . F 5 HOH A 176 776 71 HOH HOH . F 5 HOH A 177 777 53 HOH HOH . F 5 HOH A 178 778 35 HOH HOH . F 5 HOH A 179 779 39 HOH HOH . F 5 HOH A 180 780 82 HOH HOH . F 5 HOH A 181 781 245 HOH HOH . F 5 HOH A 182 782 234 HOH HOH . F 5 HOH A 183 783 129 HOH HOH . F 5 HOH A 184 784 48 HOH HOH . F 5 HOH A 185 785 232 HOH HOH . F 5 HOH A 186 786 248 HOH HOH . F 5 HOH A 187 787 69 HOH HOH . F 5 HOH A 188 788 49 HOH HOH . F 5 HOH A 189 789 141 HOH HOH . F 5 HOH A 190 790 215 HOH HOH . F 5 HOH A 191 791 128 HOH HOH . F 5 HOH A 192 792 144 HOH HOH . F 5 HOH A 193 793 95 HOH HOH . F 5 HOH A 194 794 134 HOH HOH . F 5 HOH A 195 795 186 HOH HOH . F 5 HOH A 196 796 142 HOH HOH . F 5 HOH A 197 797 258 HOH HOH . F 5 HOH A 198 798 145 HOH HOH . F 5 HOH A 199 799 193 HOH HOH . F 5 HOH A 200 800 177 HOH HOH . F 5 HOH A 201 801 65 HOH HOH . F 5 HOH A 202 802 183 HOH HOH . F 5 HOH A 203 803 249 HOH HOH . F 5 HOH A 204 804 190 HOH HOH . F 5 HOH A 205 805 175 HOH HOH . F 5 HOH A 206 806 226 HOH HOH . F 5 HOH A 207 807 208 HOH HOH . F 5 HOH A 208 808 216 HOH HOH . F 5 HOH A 209 809 199 HOH HOH . F 5 HOH A 210 810 163 HOH HOH . F 5 HOH A 211 811 103 HOH HOH . F 5 HOH A 212 812 90 HOH HOH . F 5 HOH A 213 813 164 HOH HOH . F 5 HOH A 214 814 256 HOH HOH . F 5 HOH A 215 815 252 HOH HOH . F 5 HOH A 216 816 253 HOH HOH . F 5 HOH A 217 817 45 HOH HOH . F 5 HOH A 218 818 200 HOH HOH . F 5 HOH A 219 819 173 HOH HOH . F 5 HOH A 220 820 67 HOH HOH . F 5 HOH A 221 821 146 HOH HOH . F 5 HOH A 222 822 209 HOH HOH . F 5 HOH A 223 823 155 HOH HOH . F 5 HOH A 224 824 185 HOH HOH . F 5 HOH A 225 825 168 HOH HOH . F 5 HOH A 226 826 107 HOH HOH . F 5 HOH A 227 827 138 HOH HOH . F 5 HOH A 228 828 137 HOH HOH . F 5 HOH A 229 829 101 HOH HOH . F 5 HOH A 230 830 191 HOH HOH . F 5 HOH A 231 831 92 HOH HOH . F 5 HOH A 232 832 218 HOH HOH . F 5 HOH A 233 833 212 HOH HOH . F 5 HOH A 234 834 214 HOH HOH . F 5 HOH A 235 835 239 HOH HOH . F 5 HOH A 236 836 188 HOH HOH . F 5 HOH A 237 837 181 HOH HOH . F 5 HOH A 238 838 77 HOH HOH . F 5 HOH A 239 839 135 HOH HOH . F 5 HOH A 240 840 224 HOH HOH . F 5 HOH A 241 841 255 HOH HOH . F 5 HOH A 242 842 143 HOH HOH . F 5 HOH A 243 843 187 HOH HOH . F 5 HOH A 244 844 213 HOH HOH . F 5 HOH A 245 845 246 HOH HOH . F 5 HOH A 246 846 162 HOH HOH . F 5 HOH A 247 847 227 HOH HOH . F 5 HOH A 248 848 169 HOH HOH . F 5 HOH A 249 849 174 HOH HOH . F 5 HOH A 250 850 240 HOH HOH . F 5 HOH A 251 851 198 HOH HOH . F 5 HOH A 252 852 244 HOH HOH . F 5 HOH A 253 853 127 HOH HOH . F 5 HOH A 254 854 201 HOH HOH . F 5 HOH A 255 855 148 HOH HOH . F 5 HOH A 256 856 230 HOH HOH . F 5 HOH A 257 857 197 HOH HOH . F 5 HOH A 258 858 243 HOH HOH . F 5 HOH A 259 859 210 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -94.537 _atom_site.Cartn_y 186.542 _atom_site.Cartn_z 1.702 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 72.14 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 503 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 222 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #