data_5N18
#
_model_server_result.job_id            gW9mv4Q1UAfcBbHEJZSXjA 
_model_server_result.datetime_utc      '2024-12-29 00:22:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5n18 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":501}' 
#
_entry.id    5N18 
#
_exptl.entry_id    5N18 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          107.61 
_cell.angle_gamma         90 
_cell.entry_id            5N18 
_cell.length_a            46.484 
_cell.length_b            35.997 
_cell.length_c            64.495 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5N18 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 176 n n 
C1 C2 GOL sing 177 n n 
C1 H11 GOL sing 178 n n 
C1 H12 GOL sing 179 n n 
O1 HO1 GOL sing 180 n n 
C2 O2 GOL sing 181 n n 
C2 C3 GOL sing 182 n n 
C2 H2 GOL sing 183 n n 
O2 HO2 GOL sing 184 n n 
C3 O3 GOL sing 185 n n 
C3 H31 GOL sing 186 n n 
C3 H32 GOL sing 187 n n 
O3 HO3 GOL sing 188 n n 
#
_atom_sites.entry_id                     5N18 
_atom_sites.fract_transf_matrix[1][1]    0.021513 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006826 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.02778 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016267 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 8HZ A 1 501 1 8HZ M51 . 
D 3 GOL B 1 501 1 GOL GOL . 
E 4 HOH A 1 601 62 HOH HOH . 
E 4 HOH A 2 602 71 HOH HOH . 
E 4 HOH A 3 603 38 HOH HOH . 
E 4 HOH A 4 604 93 HOH HOH . 
E 4 HOH A 5 605 84 HOH HOH . 
E 4 HOH A 6 606 110 HOH HOH . 
E 4 HOH A 7 607 39 HOH HOH . 
E 4 HOH A 8 608 30 HOH HOH . 
E 4 HOH A 9 609 46 HOH HOH . 
E 4 HOH A 10 610 81 HOH HOH . 
E 4 HOH A 11 611 51 HOH HOH . 
E 4 HOH A 12 612 53 HOH HOH . 
E 4 HOH A 13 613 47 HOH HOH . 
E 4 HOH A 14 614 59 HOH HOH . 
E 4 HOH A 15 615 6 HOH HOH . 
E 4 HOH A 16 616 0 HOH HOH . 
E 4 HOH A 17 617 87 HOH HOH . 
E 4 HOH A 18 618 92 HOH HOH . 
E 4 HOH A 19 619 60 HOH HOH . 
E 4 HOH A 20 620 77 HOH HOH . 
E 4 HOH A 21 621 10 HOH HOH . 
E 4 HOH A 22 622 99 HOH HOH . 
E 4 HOH A 23 623 80 HOH HOH . 
E 4 HOH A 24 624 4 HOH HOH . 
E 4 HOH A 25 625 15 HOH HOH . 
E 4 HOH A 26 626 48 HOH HOH . 
E 4 HOH A 27 627 57 HOH HOH . 
E 4 HOH A 28 628 52 HOH HOH . 
E 4 HOH A 29 629 69 HOH HOH . 
E 4 HOH A 30 630 44 HOH HOH . 
E 4 HOH A 31 631 24 HOH HOH . 
E 4 HOH A 32 632 3 HOH HOH . 
E 4 HOH A 33 633 2 HOH HOH . 
E 4 HOH A 34 634 45 HOH HOH . 
E 4 HOH A 35 635 94 HOH HOH . 
E 4 HOH A 36 636 58 HOH HOH . 
E 4 HOH A 37 637 63 HOH HOH . 
E 4 HOH A 38 638 20 HOH HOH . 
E 4 HOH A 39 639 54 HOH HOH . 
E 4 HOH A 40 640 5 HOH HOH . 
E 4 HOH A 41 641 27 HOH HOH . 
E 4 HOH A 42 642 79 HOH HOH . 
E 4 HOH A 43 643 8 HOH HOH . 
E 4 HOH A 44 644 -1 HOH HOH . 
E 4 HOH A 45 645 19 HOH HOH . 
E 4 HOH A 46 646 85 HOH HOH . 
E 4 HOH A 47 647 14 HOH HOH . 
E 4 HOH A 48 648 103 HOH HOH . 
E 4 HOH A 49 649 18 HOH HOH . 
E 4 HOH A 50 650 90 HOH HOH . 
E 4 HOH A 51 651 72 HOH HOH . 
E 4 HOH A 52 652 114 HOH HOH . 
E 4 HOH A 53 653 22 HOH HOH . 
E 4 HOH A 54 654 109 HOH HOH . 
E 4 HOH A 55 655 16 HOH HOH . 
E 4 HOH A 56 656 56 HOH HOH . 
E 4 HOH A 57 657 61 HOH HOH . 
E 4 HOH A 58 658 74 HOH HOH . 
E 4 HOH A 59 659 23 HOH HOH . 
E 4 HOH A 60 660 11 HOH HOH . 
E 4 HOH A 61 661 35 HOH HOH . 
E 4 HOH A 62 662 31 HOH HOH . 
E 4 HOH A 63 663 36 HOH HOH . 
E 4 HOH A 64 664 43 HOH HOH . 
E 4 HOH A 65 665 82 HOH HOH . 
E 4 HOH A 66 666 28 HOH HOH . 
E 4 HOH A 67 667 49 HOH HOH . 
E 4 HOH A 68 668 60 HOH HOH . 
E 4 HOH A 69 669 29 HOH HOH . 
E 4 HOH A 70 670 50 HOH HOH . 
E 4 HOH A 71 671 32 HOH HOH . 
E 4 HOH A 72 672 25 HOH HOH . 
E 4 HOH A 73 673 7 HOH HOH . 
E 4 HOH A 74 674 12 HOH HOH . 
E 4 HOH A 75 675 116 HOH HOH . 
E 4 HOH A 76 676 33 HOH HOH . 
E 4 HOH A 77 677 88 HOH HOH . 
E 4 HOH A 78 678 21 HOH HOH . 
E 4 HOH A 79 679 13 HOH HOH . 
E 4 HOH A 80 680 17 HOH HOH . 
E 4 HOH A 81 681 9 HOH HOH . 
E 4 HOH A 82 682 98 HOH HOH . 
E 4 HOH A 83 683 123 HOH HOH . 
E 4 HOH A 84 684 97 HOH HOH . 
E 4 HOH A 85 685 101 HOH HOH . 
E 4 HOH A 86 686 135 HOH HOH . 
E 4 HOH A 87 687 64 HOH HOH . 
E 4 HOH A 88 688 41 HOH HOH . 
E 4 HOH A 89 689 65 HOH HOH . 
E 4 HOH A 90 690 89 HOH HOH . 
E 4 HOH A 91 691 66 HOH HOH . 
E 4 HOH A 92 692 111 HOH HOH . 
E 4 HOH A 93 693 95 HOH HOH . 
E 4 HOH A 94 694 83 HOH HOH . 
E 4 HOH A 95 695 100 HOH HOH . 
E 4 HOH A 96 696 113 HOH HOH . 
E 4 HOH A 97 697 119 HOH HOH . 
E 4 HOH A 98 698 108 HOH HOH . 
E 4 HOH A 99 699 86 HOH HOH . 
E 4 HOH A 100 700 105 HOH HOH . 
E 4 HOH A 101 701 91 HOH HOH . 
E 4 HOH A 102 702 115 HOH HOH . 
E 4 HOH A 103 703 111 HOH HOH . 
E 4 HOH A 104 704 107 HOH HOH . 
E 4 HOH A 105 705 121 HOH HOH . 
E 4 HOH A 106 706 96 HOH HOH . 
E 4 HOH A 107 707 67 HOH HOH . 
E 4 HOH A 108 708 76 HOH HOH . 
E 4 HOH A 109 709 122 HOH HOH . 
E 4 HOH A 110 710 86 HOH HOH . 
E 4 HOH A 111 711 102 HOH HOH . 
E 4 HOH A 112 712 75 HOH HOH . 
E 4 HOH A 113 713 106 HOH HOH . 
E 4 HOH A 114 714 40 HOH HOH . 
E 4 HOH A 115 715 34 HOH HOH . 
E 4 HOH A 116 716 124 HOH HOH . 
E 4 HOH A 117 717 70 HOH HOH . 
E 4 HOH A 118 718 73 HOH HOH . 
E 4 HOH A 119 719 37 HOH HOH . 
E 4 HOH A 120 720 104 HOH HOH . 
E 4 HOH A 121 721 120 HOH HOH . 
E 4 HOH A 122 722 112 HOH HOH . 
F 4 HOH B 1 601 106 HOH HOH . 
F 4 HOH B 2 602 1 HOH HOH . 
F 4 HOH B 3 603 134 HOH HOH . 
F 4 HOH B 4 604 34 HOH HOH . 
F 4 HOH B 5 605 136 HOH HOH . 
F 4 HOH B 6 606 68 HOH HOH . 
F 4 HOH B 7 607 47 HOH HOH . 
F 4 HOH B 8 608 68 HOH HOH . 
F 4 HOH B 9 609 12 HOH HOH . 
F 4 HOH B 10 610 78 HOH HOH . 
F 4 HOH B 11 611 103 HOH HOH . 
F 4 HOH B 12 612 110 HOH HOH . 
F 4 HOH B 13 613 145 HOH HOH . 
F 4 HOH B 14 614 142 HOH HOH . 
F 4 HOH B 15 615 85 HOH HOH . 
F 4 HOH B 16 616 48 HOH HOH . 
F 4 HOH B 17 617 113 HOH HOH . 
F 4 HOH B 18 618 0 HOH HOH . 
F 4 HOH B 19 619 87 HOH HOH . 
F 4 HOH B 20 620 62 HOH HOH . 
F 4 HOH B 21 621 65 HOH HOH . 
F 4 HOH B 22 622 30 HOH HOH . 
F 4 HOH B 23 623 104 HOH HOH . 
F 4 HOH B 24 624 100 HOH HOH . 
F 4 HOH B 25 625 88 HOH HOH . 
F 4 HOH B 26 626 29 HOH HOH . 
F 4 HOH B 27 627 3 HOH HOH . 
F 4 HOH B 28 628 8 HOH HOH . 
F 4 HOH B 29 629 27 HOH HOH . 
F 4 HOH B 30 630 141 HOH HOH . 
F 4 HOH B 31 631 43 HOH HOH . 
F 4 HOH B 32 632 63 HOH HOH . 
F 4 HOH B 33 633 50 HOH HOH . 
F 4 HOH B 34 634 2 HOH HOH . 
F 4 HOH B 35 635 25 HOH HOH . 
F 4 HOH B 36 636 15 HOH HOH . 
F 4 HOH B 37 637 129 HOH HOH . 
F 4 HOH B 38 638 108 HOH HOH . 
F 4 HOH B 39 639 54 HOH HOH . 
F 4 HOH B 40 640 41 HOH HOH . 
F 4 HOH B 41 641 55 HOH HOH . 
F 4 HOH B 42 642 75 HOH HOH . 
F 4 HOH B 43 643 38 HOH HOH . 
F 4 HOH B 44 644 53 HOH HOH . 
F 4 HOH B 45 645 39 HOH HOH . 
F 4 HOH B 46 646 45 HOH HOH . 
F 4 HOH B 47 647 4 HOH HOH . 
F 4 HOH B 48 648 42 HOH HOH . 
F 4 HOH B 49 649 57 HOH HOH . 
F 4 HOH B 50 650 17 HOH HOH . 
F 4 HOH B 51 651 10 HOH HOH . 
F 4 HOH B 52 652 96 HOH HOH . 
F 4 HOH B 53 653 19 HOH HOH . 
F 4 HOH B 54 654 14 HOH HOH . 
F 4 HOH B 55 655 21 HOH HOH . 
F 4 HOH B 56 656 76 HOH HOH . 
F 4 HOH B 57 657 5 HOH HOH . 
F 4 HOH B 58 658 36 HOH HOH . 
F 4 HOH B 59 659 18 HOH HOH . 
F 4 HOH B 60 660 101 HOH HOH . 
F 4 HOH B 61 661 59 HOH HOH . 
F 4 HOH B 62 662 139 HOH HOH . 
F 4 HOH B 63 663 73 HOH HOH . 
F 4 HOH B 64 664 46 HOH HOH . 
F 4 HOH B 65 665 94 HOH HOH . 
F 4 HOH B 66 666 9 HOH HOH . 
F 4 HOH B 67 667 89 HOH HOH . 
F 4 HOH B 68 668 13 HOH HOH . 
F 4 HOH B 69 669 37 HOH HOH . 
F 4 HOH B 70 670 24 HOH HOH . 
F 4 HOH B 71 671 6 HOH HOH . 
F 4 HOH B 72 672 51 HOH HOH . 
F 4 HOH B 73 673 20 HOH HOH . 
F 4 HOH B 74 674 95 HOH HOH . 
F 4 HOH B 75 675 78 HOH HOH . 
F 4 HOH B 76 676 7 HOH HOH . 
F 4 HOH B 77 677 83 HOH HOH . 
F 4 HOH B 78 678 84 HOH HOH . 
F 4 HOH B 79 679 143 HOH HOH . 
F 4 HOH B 80 680 33 HOH HOH . 
F 4 HOH B 81 681 105 HOH HOH . 
F 4 HOH B 82 682 82 HOH HOH . 
F 4 HOH B 83 683 98 HOH HOH . 
F 4 HOH B 84 684 67 HOH HOH . 
F 4 HOH B 85 685 81 HOH HOH . 
F 4 HOH B 86 686 49 HOH HOH . 
F 4 HOH B 87 687 138 HOH HOH . 
F 4 HOH B 88 688 44 HOH HOH . 
F 4 HOH B 89 689 31 HOH HOH . 
F 4 HOH B 90 690 80 HOH HOH . 
F 4 HOH B 91 691 58 HOH HOH . 
F 4 HOH B 92 692 22 HOH HOH . 
F 4 HOH B 93 693 28 HOH HOH . 
F 4 HOH B 94 694 109 HOH HOH . 
F 4 HOH B 95 695 40 HOH HOH . 
F 4 HOH B 96 696 132 HOH HOH . 
F 4 HOH B 97 697 61 HOH HOH . 
F 4 HOH B 98 698 -1 HOH HOH . 
F 4 HOH B 99 699 55 HOH HOH . 
F 4 HOH B 100 700 133 HOH HOH . 
F 4 HOH B 101 701 140 HOH HOH . 
F 4 HOH B 102 702 120 HOH HOH . 
F 4 HOH B 103 703 52 HOH HOH . 
F 4 HOH B 104 704 70 HOH HOH . 
F 4 HOH B 105 705 16 HOH HOH . 
F 4 HOH B 106 706 118 HOH HOH . 
F 4 HOH B 107 707 23 HOH HOH . 
F 4 HOH B 108 708 107 HOH HOH . 
F 4 HOH B 109 709 71 HOH HOH . 
F 4 HOH B 110 710 91 HOH HOH . 
F 4 HOH B 111 711 131 HOH HOH . 
F 4 HOH B 112 712 64 HOH HOH . 
F 4 HOH B 113 713 119 HOH HOH . 
F 4 HOH B 114 714 121 HOH HOH . 
F 4 HOH B 115 715 146 HOH HOH . 
F 4 HOH B 116 716 93 HOH HOH . 
F 4 HOH B 117 717 72 HOH HOH . 
F 4 HOH B 118 718 42 HOH HOH . 
F 4 HOH B 119 719 127 HOH HOH . 
F 4 HOH B 120 720 99 HOH HOH . 
F 4 HOH B 121 721 74 HOH HOH . 
F 4 HOH B 122 722 112 HOH HOH . 
F 4 HOH B 123 723 79 HOH HOH . 
F 4 HOH B 124 724 126 HOH HOH . 
F 4 HOH B 125 725 125 HOH HOH . 
F 4 HOH B 126 726 122 HOH HOH . 
F 4 HOH B 127 727 144 HOH HOH . 
F 4 HOH B 128 728 35 HOH HOH . 
F 4 HOH B 129 729 26 HOH HOH . 
F 4 HOH B 130 730 32 HOH HOH . 
F 4 HOH B 131 731 77 HOH HOH . 
F 4 HOH B 132 732 11 HOH HOH . 
F 4 HOH B 133 733 115 HOH HOH . 
F 4 HOH B 134 734 66 HOH HOH . 
F 4 HOH B 135 735 90 HOH HOH . 
F 4 HOH B 136 736 97 HOH HOH . 
F 4 HOH B 137 737 26 HOH HOH . 
F 4 HOH B 138 738 117 HOH HOH . 
F 4 HOH B 139 739 117 HOH HOH . 
F 4 HOH B 140 740 124 HOH HOH . 
F 4 HOH B 141 741 118 HOH HOH . 
F 4 HOH B 142 742 114 HOH HOH . 
F 4 HOH B 143 743 102 HOH HOH . 
F 4 HOH B 144 744 123 HOH HOH . 
F 4 HOH B 145 745 128 HOH HOH . 
F 4 HOH B 146 746 69 HOH HOH . 
F 4 HOH B 147 747 137 HOH HOH . 
F 4 HOH B 148 748 116 HOH HOH . 
F 4 HOH B 149 749 92 HOH HOH . 
F 4 HOH B 150 750 130 HOH HOH . 
F 4 HOH B 151 751 56 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 3 66.716 13.291 4.091 1 71.58 ? C1 GOL 501 B 1 
HETATM 2 O O1 GOL . . . D 3 66.078 14.545 4.021 1 71.27 ? O1 GOL 501 B 1 
HETATM 3 C C2 GOL . . . D 3 68.142 13.406 3.568 1 69.37 ? C2 GOL 501 B 1 
HETATM 4 O O2 GOL . . . D 3 68.568 12.166 3.053 1 68.93 ? O2 GOL 501 B 1 
HETATM 5 C C3 GOL . . . D 3 68.174 14.447 2.461 1 64.41 ? C3 GOL 501 B 1 
HETATM 6 O O3 GOL . . . D 3 68.069 15.738 3.011 1 62.68 ? O3 GOL 501 B 1 
#
_model_server_stats.io_time_ms              57 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           6 
#