data_5N1N
#
_model_server_result.job_id            evV8jJD4JzMgV4ezp_l1Pw 
_model_server_result.datetime_utc      '2024-11-27 06:15:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5n1n 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":402}' 
#
_entry.id    5N1N 
#
_exptl.entry_id    5N1N 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              168.584 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-chloranyl-9-methyl-purine 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5N1N 
_cell.length_a            58.252 
_cell.length_b            72.515 
_cell.length_c            108.531 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5N1N 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C GLY 12 A GLY 9 1_555 A N SEP 13 A SEP 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale2 A C SEP 13 A SEP 10 1_555 A N GLU 14 A GLU 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? 
covale ? covale3 A C PHE 141 A PHE 138 1_555 A N SEP 142 A SEP 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? 
covale ? covale4 A C SEP 142 A SEP 139 1_555 A N GLU 143 A GLU 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale5 A C TRP 199 A TRP 196 1_555 A N TPO 200 A TPO 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale6 A C TPO 200 A TPO 197 1_555 A N LEU 201 A LEU 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? 
covale ? covale7 A C VAL 340 A VAL 337 1_555 A N SEP 341 A SEP 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale8 A C SEP 341 A SEP 338 1_555 A N ILE 342 A ILE 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
#
_chem_comp.formula           'C6 H5 Cl N4' 
_chem_comp.formula_weight    168.584 
_chem_comp.id                8G8 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-chloranyl-9-methyl-purine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CL C6 8G8 sing 1 n n 
N3 C6 8G8 doub 2 n y 
N3 C7 8G8 sing 3 n y 
C6 N2 8G8 sing 4 n y 
C7 C4 8G8 doub 5 n y 
N2 C5 8G8 doub 6 n y 
C4 C5 8G8 sing 7 n y 
C4 N1 8G8 sing 8 n y 
C5 N 8G8 sing 9 n y 
N1 C3 8G8 doub 10 n y 
N C3 8G8 sing 11 n y 
N C1 8G8 sing 12 n n 
C7 H8 8G8 sing 13 n n 
C3 H7 8G8 sing 14 n n 
C1 H3 8G8 sing 15 n n 
C1 H1 8G8 sing 16 n n 
C1 H2 8G8 sing 17 n n 
#
_atom_sites.entry_id                     5N1N 
_atom_sites.fract_transf_matrix[1][1]    0.017167 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01379 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009214 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 MPD A 1 401 1 MPD MPD . 
D 4 8G8 A 1 402 1 8G8 XXX . 
E 5 HOH A 1 501 196 HOH HOH . 
E 5 HOH A 2 502 127 HOH HOH . 
E 5 HOH A 3 503 147 HOH HOH . 
E 5 HOH A 4 504 146 HOH HOH . 
E 5 HOH A 5 505 197 HOH HOH . 
E 5 HOH A 6 506 137 HOH HOH . 
E 5 HOH A 7 507 184 HOH HOH . 
E 5 HOH A 8 508 200 HOH HOH . 
E 5 HOH A 9 509 172 HOH HOH . 
E 5 HOH A 10 510 152 HOH HOH . 
E 5 HOH A 11 511 160 HOH HOH . 
E 5 HOH A 12 512 213 HOH HOH . 
E 5 HOH A 13 513 32 HOH HOH . 
E 5 HOH A 14 514 148 HOH HOH . 
E 5 HOH A 15 515 182 HOH HOH . 
E 5 HOH A 16 516 162 HOH HOH . 
E 5 HOH A 17 517 75 HOH HOH . 
E 5 HOH A 18 518 126 HOH HOH . 
E 5 HOH A 19 519 140 HOH HOH . 
E 5 HOH A 20 520 50 HOH HOH . 
E 5 HOH A 21 521 165 HOH HOH . 
E 5 HOH A 22 522 52 HOH HOH . 
E 5 HOH A 23 523 49 HOH HOH . 
E 5 HOH A 24 524 87 HOH HOH . 
E 5 HOH A 25 525 101 HOH HOH . 
E 5 HOH A 26 526 188 HOH HOH . 
E 5 HOH A 27 527 38 HOH HOH . 
E 5 HOH A 28 528 209 HOH HOH . 
E 5 HOH A 29 529 151 HOH HOH . 
E 5 HOH A 30 530 13 HOH HOH . 
E 5 HOH A 31 531 118 HOH HOH . 
E 5 HOH A 32 532 11 HOH HOH . 
E 5 HOH A 33 533 100 HOH HOH . 
E 5 HOH A 34 534 107 HOH HOH . 
E 5 HOH A 35 535 23 HOH HOH . 
E 5 HOH A 36 536 8 HOH HOH . 
E 5 HOH A 37 537 12 HOH HOH . 
E 5 HOH A 38 538 61 HOH HOH . 
E 5 HOH A 39 539 58 HOH HOH . 
E 5 HOH A 40 540 204 HOH HOH . 
E 5 HOH A 41 541 112 HOH HOH . 
E 5 HOH A 42 542 44 HOH HOH . 
E 5 HOH A 43 543 55 HOH HOH . 
E 5 HOH A 44 544 39 HOH HOH . 
E 5 HOH A 45 545 125 HOH HOH . 
E 5 HOH A 46 546 60 HOH HOH . 
E 5 HOH A 47 547 132 HOH HOH . 
E 5 HOH A 48 548 155 HOH HOH . 
E 5 HOH A 49 549 68 HOH HOH . 
E 5 HOH A 50 550 36 HOH HOH . 
E 5 HOH A 51 551 51 HOH HOH . 
E 5 HOH A 52 552 98 HOH HOH . 
E 5 HOH A 53 553 115 HOH HOH . 
E 5 HOH A 54 554 97 HOH HOH . 
E 5 HOH A 55 555 145 HOH HOH . 
E 5 HOH A 56 556 154 HOH HOH . 
E 5 HOH A 57 557 17 HOH HOH . 
E 5 HOH A 58 558 156 HOH HOH . 
E 5 HOH A 59 559 136 HOH HOH . 
E 5 HOH A 60 560 48 HOH HOH . 
E 5 HOH A 61 561 18 HOH HOH . 
E 5 HOH A 62 562 109 HOH HOH . 
E 5 HOH A 63 563 185 HOH HOH . 
E 5 HOH A 64 564 96 HOH HOH . 
E 5 HOH A 65 565 45 HOH HOH . 
E 5 HOH A 66 566 30 HOH HOH . 
E 5 HOH A 67 567 42 HOH HOH . 
E 5 HOH A 68 568 5 HOH HOH . 
E 5 HOH A 69 569 206 HOH HOH . 
E 5 HOH A 70 570 34 HOH HOH . 
E 5 HOH A 71 571 91 HOH HOH . 
E 5 HOH A 72 572 31 HOH HOH . 
E 5 HOH A 73 573 80 HOH HOH . 
E 5 HOH A 74 574 110 HOH HOH . 
E 5 HOH A 75 575 83 HOH HOH . 
E 5 HOH A 76 576 171 HOH HOH . 
E 5 HOH A 77 577 94 HOH HOH . 
E 5 HOH A 78 578 131 HOH HOH . 
E 5 HOH A 79 579 102 HOH HOH . 
E 5 HOH A 80 580 138 HOH HOH . 
E 5 HOH A 81 581 159 HOH HOH . 
E 5 HOH A 82 582 37 HOH HOH . 
E 5 HOH A 83 583 76 HOH HOH . 
E 5 HOH A 84 584 167 HOH HOH . 
E 5 HOH A 85 585 124 HOH HOH . 
E 5 HOH A 86 586 10 HOH HOH . 
E 5 HOH A 87 587 116 HOH HOH . 
E 5 HOH A 88 588 189 HOH HOH . 
E 5 HOH A 89 589 164 HOH HOH . 
E 5 HOH A 90 590 63 HOH HOH . 
E 5 HOH A 91 591 81 HOH HOH . 
E 5 HOH A 92 592 72 HOH HOH . 
E 5 HOH A 93 593 24 HOH HOH . 
E 5 HOH A 94 594 21 HOH HOH . 
E 5 HOH A 95 595 4 HOH HOH . 
E 5 HOH A 96 596 113 HOH HOH . 
E 5 HOH A 97 597 122 HOH HOH . 
E 5 HOH A 98 598 16 HOH HOH . 
E 5 HOH A 99 599 117 HOH HOH . 
E 5 HOH A 100 600 173 HOH HOH . 
E 5 HOH A 101 601 191 HOH HOH . 
E 5 HOH A 102 602 65 HOH HOH . 
E 5 HOH A 103 603 62 HOH HOH . 
E 5 HOH A 104 604 2 HOH HOH . 
E 5 HOH A 105 605 66 HOH HOH . 
E 5 HOH A 106 606 106 HOH HOH . 
E 5 HOH A 107 607 41 HOH HOH . 
E 5 HOH A 108 608 92 HOH HOH . 
E 5 HOH A 109 609 71 HOH HOH . 
E 5 HOH A 110 610 33 HOH HOH . 
E 5 HOH A 111 611 26 HOH HOH . 
E 5 HOH A 112 612 20 HOH HOH . 
E 5 HOH A 113 613 139 HOH HOH . 
E 5 HOH A 114 614 79 HOH HOH . 
E 5 HOH A 115 615 73 HOH HOH . 
E 5 HOH A 116 616 78 HOH HOH . 
E 5 HOH A 117 617 214 HOH HOH . 
E 5 HOH A 118 618 40 HOH HOH . 
E 5 HOH A 119 619 9 HOH HOH . 
E 5 HOH A 120 620 54 HOH HOH . 
E 5 HOH A 121 621 153 HOH HOH . 
E 5 HOH A 122 622 212 HOH HOH . 
E 5 HOH A 123 623 108 HOH HOH . 
E 5 HOH A 124 624 202 HOH HOH . 
E 5 HOH A 125 625 47 HOH HOH . 
E 5 HOH A 126 626 46 HOH HOH . 
E 5 HOH A 127 627 64 HOH HOH . 
E 5 HOH A 128 628 169 HOH HOH . 
E 5 HOH A 129 629 187 HOH HOH . 
E 5 HOH A 130 630 29 HOH HOH . 
E 5 HOH A 131 631 82 HOH HOH . 
E 5 HOH A 132 632 77 HOH HOH . 
E 5 HOH A 133 633 95 HOH HOH . 
E 5 HOH A 134 634 15 HOH HOH . 
E 5 HOH A 135 635 166 HOH HOH . 
E 5 HOH A 136 636 22 HOH HOH . 
E 5 HOH A 137 637 133 HOH HOH . 
E 5 HOH A 138 638 123 HOH HOH . 
E 5 HOH A 139 639 103 HOH HOH . 
E 5 HOH A 140 640 119 HOH HOH . 
E 5 HOH A 141 641 193 HOH HOH . 
E 5 HOH A 142 642 56 HOH HOH . 
E 5 HOH A 143 643 180 HOH HOH . 
E 5 HOH A 144 644 69 HOH HOH . 
E 5 HOH A 145 645 27 HOH HOH . 
E 5 HOH A 146 646 53 HOH HOH . 
E 5 HOH A 147 647 211 HOH HOH . 
E 5 HOH A 148 648 67 HOH HOH . 
E 5 HOH A 149 649 111 HOH HOH . 
E 5 HOH A 150 650 141 HOH HOH . 
E 5 HOH A 151 651 85 HOH HOH . 
E 5 HOH A 152 652 190 HOH HOH . 
E 5 HOH A 153 653 19 HOH HOH . 
E 5 HOH A 154 654 93 HOH HOH . 
E 5 HOH A 155 655 6 HOH HOH . 
E 5 HOH A 156 656 70 HOH HOH . 
E 5 HOH A 157 657 121 HOH HOH . 
E 5 HOH A 158 658 128 HOH HOH . 
E 5 HOH A 159 659 129 HOH HOH . 
E 5 HOH A 160 660 35 HOH HOH . 
E 5 HOH A 161 661 168 HOH HOH . 
E 5 HOH A 162 662 194 HOH HOH . 
E 5 HOH A 163 663 178 HOH HOH . 
E 5 HOH A 164 664 207 HOH HOH . 
E 5 HOH A 165 665 201 HOH HOH . 
E 5 HOH A 166 666 170 HOH HOH . 
E 5 HOH A 167 667 157 HOH HOH . 
E 5 HOH A 168 668 174 HOH HOH . 
E 5 HOH A 169 669 105 HOH HOH . 
E 5 HOH A 170 670 163 HOH HOH . 
E 5 HOH A 171 671 99 HOH HOH . 
E 5 HOH A 172 672 120 HOH HOH . 
E 5 HOH A 173 673 142 HOH HOH . 
E 5 HOH A 174 674 192 HOH HOH . 
E 5 HOH A 175 675 186 HOH HOH . 
E 5 HOH A 176 676 134 HOH HOH . 
E 5 HOH A 177 677 28 HOH HOH . 
E 5 HOH A 178 678 161 HOH HOH . 
E 5 HOH A 179 679 181 HOH HOH . 
E 5 HOH A 180 680 130 HOH HOH . 
E 5 HOH A 181 681 57 HOH HOH . 
E 5 HOH A 182 682 88 HOH HOH . 
E 5 HOH A 183 683 158 HOH HOH . 
E 5 HOH A 184 684 175 HOH HOH . 
E 5 HOH A 185 685 203 HOH HOH . 
E 5 HOH A 186 686 114 HOH HOH . 
E 5 HOH A 187 687 215 HOH HOH . 
E 5 HOH A 188 688 210 HOH HOH . 
E 5 HOH A 189 689 150 HOH HOH . 
E 5 HOH A 190 690 149 HOH HOH . 
E 5 HOH A 191 691 144 HOH HOH . 
E 5 HOH A 192 692 208 HOH HOH . 
E 5 HOH A 193 693 183 HOH HOH . 
E 5 HOH A 194 694 198 HOH HOH . 
E 5 HOH A 195 695 90 HOH HOH . 
E 5 HOH A 196 696 205 HOH HOH . 
E 5 HOH A 197 697 176 HOH HOH . 
E 5 HOH A 198 698 179 HOH HOH . 
E 5 HOH A 199 699 177 HOH HOH . 
F 5 HOH B 1 101 59 HOH HOH . 
F 5 HOH B 2 102 3 HOH HOH . 
F 5 HOH B 3 103 7 HOH HOH . 
F 5 HOH B 4 104 25 HOH HOH . 
F 5 HOH B 5 105 14 HOH HOH . 
F 5 HOH B 6 106 89 HOH HOH . 
F 5 HOH B 7 107 195 HOH HOH . 
F 5 HOH B 8 108 43 HOH HOH . 
F 5 HOH B 9 109 104 HOH HOH . 
F 5 HOH B 10 110 74 HOH HOH . 
F 5 HOH B 11 111 199 HOH HOH . 
F 5 HOH B 12 112 86 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 8G8 . . . D 4 -6.074 39.609 -11.958 0.72 41.91 ? C4 8G8 402 A 1 
HETATM 2 C C5 8G8 . . . D 4 -5.071 38.663 -11.769 0.72 40.77 ? C5 8G8 402 A 1 
HETATM 3 C C6 8G8 . . . D 4 -5.201 37.919 -13.828 0.72 40.21 ? C6 8G8 402 A 1 
HETATM 4 N N1 8G8 . . . D 4 -6.278 40.326 -10.782 0.72 43.38 ? N1 8G8 402 A 1 
HETATM 5 C C7 8G8 . . . D 4 -6.559 39.587 -13.253 0.72 41.38 ? C7 8G8 402 A 1 
HETATM 6 N N2 8G8 . . . D 4 -4.616 37.78 -12.656 0.72 39.72 ? N2 8G8 402 A 1 
HETATM 7 N N3 8G8 . . . D 4 -6.136 38.763 -14.219 0.72 41.08 ? N3 8G8 402 A 1 
HETATM 8 CL CL 8G8 . . . D 4 -4.662 36.81 -15.034 0.72 42.11 ? CL 8G8 402 A 1 
HETATM 9 C C3 8G8 . . . D 4 -5.402 39.828 -9.945 0.72 42.57 ? C3 8G8 402 A 1 
HETATM 10 N N 8G8 . . . D 4 -4.631 38.83 -10.475 0.72 42 ? N 8G8 402 A 1 
HETATM 11 C C1 8G8 . . . D 4 -3.512 38.102 -9.84 0.72 41.58 ? C1 8G8 402 A 1 
HETATM 12 H H8 8G8 . . . D 4 -7.346 40.273 -13.562 0.72 49.66 ? H8 8G8 402 A 1 
HETATM 13 H H7 8G8 . . . D 4 -5.29 40.172 -8.918 0.72 51.09 ? H7 8G8 402 A 1 
HETATM 14 H H3 8G8 . . . D 4 -2.741 37.979 -10.599 0.72 49.9 ? H3 8G8 402 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           327 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           14 
#