data_5N1T # _model_server_result.job_id RLuo7Uc8T9Hu2Ae_aE7dZQ _model_server_result.datetime_utc '2024-11-25 21:03:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5n1t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":201}' # _entry.id 5N1T # _exptl.entry_id 5N1T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5N1T _cell.length_a 39.53 _cell.length_b 138.4 _cell.length_c 155.81 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5N1T _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 77 A CYS 73 1_555 E C8M FAD . A FAD 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.701 ? covale ? covale2 A C ARG 196 A ARG 192 1_555 A N CSS 197 A CSS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale3 A C CSS 197 A CSS 193 1_555 A N PRO 198 A PRO 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale4 B SG CYS 38 B CYS 11 1_555 F CAB HEC . B HEC 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.639 ? covale ? covale5 B SG CYS 41 B CYS 14 1_555 F CAC HEC . B HEC 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.675 ? covale ? covale6 B SG CYS 41 B CYS 14 1_555 F CBC HEC . B HEC 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.827 ? metalc ? metalc1 B NE2 HIS 42 B HIS 15 1_555 F FE HEC . B HEC 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.877 ? metalc ? metalc2 B SD MET 80 B MET 53 1_555 F FE HEC . B HEC 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc3 D N HIS 31 W HIS 1 1_555 G CU CU . W CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc4 D ND1 HIS 31 W HIS 1 1_555 G CU CU . W CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc5 D OD2 ASP 140 W ASP 110 1_555 G CU CU . W CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.924 ? metalc ? metalc6 D ND1 HIS 142 W HIS 112 1_555 G CU CU . W CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? # _chem_comp.formula 'Cu 2' _chem_comp.formula_weight 63.546 _chem_comp.id CU _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5N1T _atom_sites.fract_transf_matrix[1][1] 0.025297 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007225 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006418 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 FAD A 1 501 699 FAD FAD . F 5 HEC B 1 901 901 HEC HEC . G 6 CU W 1 201 1 CU CU . H 7 GOL W 1 202 1 GOL GOL . I 8 HOH A 1 601 47 HOH HOH . I 8 HOH A 2 602 17 HOH HOH . I 8 HOH A 3 603 23 HOH HOH . I 8 HOH A 4 604 40 HOH HOH . I 8 HOH A 5 605 14 HOH HOH . I 8 HOH A 6 606 26 HOH HOH . I 8 HOH A 7 607 7 HOH HOH . I 8 HOH A 8 608 32 HOH HOH . I 8 HOH A 9 609 29 HOH HOH . I 8 HOH A 10 610 1 HOH HOH . I 8 HOH A 11 611 3 HOH HOH . I 8 HOH A 12 612 25 HOH HOH . I 8 HOH A 13 613 35 HOH HOH . I 8 HOH A 14 614 4 HOH HOH . I 8 HOH A 15 615 38 HOH HOH . I 8 HOH A 16 616 5 HOH HOH . I 8 HOH A 17 617 28 HOH HOH . I 8 HOH A 18 618 21 HOH HOH . I 8 HOH A 19 619 2 HOH HOH . I 8 HOH A 20 620 42 HOH HOH . I 8 HOH A 21 621 41 HOH HOH . I 8 HOH A 22 622 57 HOH HOH . I 8 HOH A 23 623 18 HOH HOH . I 8 HOH A 24 624 48 HOH HOH . I 8 HOH A 25 625 24 HOH HOH . I 8 HOH A 26 626 8 HOH HOH . I 8 HOH A 27 627 12 HOH HOH . I 8 HOH A 28 628 30 HOH HOH . I 8 HOH A 29 629 58 HOH HOH . I 8 HOH A 30 630 16 HOH HOH . I 8 HOH A 31 631 44 HOH HOH . I 8 HOH A 32 632 9 HOH HOH . I 8 HOH A 33 633 20 HOH HOH . I 8 HOH A 34 634 11 HOH HOH . I 8 HOH A 35 635 19 HOH HOH . I 8 HOH A 36 636 46 HOH HOH . I 8 HOH A 37 637 13 HOH HOH . I 8 HOH A 38 638 45 HOH HOH . I 8 HOH A 39 639 43 HOH HOH . J 8 HOH B 1 1001 27 HOH HOH . J 8 HOH B 2 1002 37 HOH HOH . J 8 HOH B 3 1003 49 HOH HOH . J 8 HOH B 4 1004 50 HOH HOH . J 8 HOH B 5 1005 31 HOH HOH . J 8 HOH B 6 1006 22 HOH HOH . K 8 HOH M 1 201 6 HOH HOH . K 8 HOH M 2 202 34 HOH HOH . K 8 HOH M 3 203 53 HOH HOH . K 8 HOH M 4 204 52 HOH HOH . L 8 HOH W 1 301 36 HOH HOH . L 8 HOH W 2 302 54 HOH HOH . L 8 HOH W 3 303 39 HOH HOH . L 8 HOH W 4 304 15 HOH HOH . L 8 HOH W 5 305 33 HOH HOH . L 8 HOH W 6 306 51 HOH HOH . L 8 HOH W 7 307 10 HOH HOH . L 8 HOH W 8 308 55 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 6 _atom_site.Cartn_x 7.264 _atom_site.Cartn_y 23.906 _atom_site.Cartn_z 66.878 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 83.11 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU _atom_site.auth_seq_id 201 _atom_site.auth_asym_id W _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #