data_5N21 # _model_server_result.job_id UZqyWSqqeRaV3z--96jcYw _model_server_result.datetime_utc '2024-10-28 02:43:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5n21 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 5N21 # _exptl.entry_id 5N21 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 431.447 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[(2~{S})-1-[3-cyano-7-[(2-oxidanylidene-3,4-dihydro-1~{H}-quinolin-6-yl)amino]pyrazolo[1,5-a]pyrimidin-5-yl]pyrrolidin-2-yl]ethanoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 83.36 _cell.angle_beta 75.39 _cell.angle_gamma 67.21 _cell.entry_id 5N21 _cell.length_a 30.4 _cell.length_b 38.97 _cell.length_c 54.93 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5N21 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C22 H21 N7 O3' _chem_comp.formula_weight 431.447 _chem_comp.id 8HN _chem_comp.mon_nstd_flag . _chem_comp.name '2-[(2~{S})-1-[3-cyano-7-[(2-oxidanylidene-3,4-dihydro-1~{H}-quinolin-6-yl)amino]pyrazolo[1,5-a]pyrimidin-5-yl]pyrrolidin-2-yl]ethanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 C21 8HN doub 1 n n C21 N6 8HN sing 2 n n C21 C20 8HN sing 3 n n N6 C2 8HN sing 4 n n C1 C2 8HN doub 5 n y C1 C 8HN sing 6 n y C2 C3 8HN sing 7 n y C20 C19 8HN sing 8 n n O1 C18 8HN doub 9 n n C19 C3 8HN sing 10 n n C C5 8HN doub 11 n y C3 C4 8HN doub 12 n y C15 C16 8HN sing 13 n n C15 C14 8HN sing 14 n n C18 O 8HN sing 15 n n C18 C17 8HN sing 16 n n C5 C4 8HN sing 17 n y C5 N 8HN sing 18 n n C16 C17 8HN sing 19 n n C16 N5 8HN sing 20 n n C14 C13 8HN sing 21 n n C7 C6 8HN doub 22 n y C7 C8 8HN sing 23 n y N C6 8HN sing 24 n n N5 C8 8HN sing 25 n n N5 C13 8HN sing 26 n n C6 N2 8HN sing 27 n y C8 N1 8HN doub 28 n y N2 C9 8HN sing 29 n y N2 N3 8HN sing 30 n y N1 C9 8HN sing 31 n y C9 C11 8HN doub 32 n y N3 C10 8HN doub 33 n y C11 C10 8HN sing 34 n y C11 C12 8HN sing 35 n n C12 N4 8HN trip 36 n n C1 H1 8HN sing 37 n n N6 H2 8HN sing 38 n n C7 H3 8HN sing 39 n n C10 H4 8HN sing 40 n n C13 H5 8HN sing 41 n n C13 H6 8HN sing 42 n n C14 H7 8HN sing 43 n n C14 H8 8HN sing 44 n n C15 H9 8HN sing 45 n n C15 H10 8HN sing 46 n n C16 H11 8HN sing 47 n n C19 H12 8HN sing 48 n n C19 H13 8HN sing 49 n n C20 H14 8HN sing 50 n n C20 H15 8HN sing 51 n n C4 H16 8HN sing 52 n n C H17 8HN sing 53 n n N H18 8HN sing 54 n n C17 H19 8HN sing 55 n n C17 H20 8HN sing 56 n n O H21 8HN sing 57 n n # _atom_sites.entry_id 5N21 _atom_sites.fract_transf_matrix[1][1] 0.032895 _atom_sites.fract_transf_matrix[1][2] -0.013821 _atom_sites.fract_transf_matrix[1][3] -0.008299 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.027834 _atom_sites.fract_transf_matrix[2][3] -0.000559 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018817 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 201 1 CL CL . D 3 8HN A 1 202 2 8HN INH . E 2 CL B 1 201 2 CL CL . F 3 8HN B 1 202 1 8HN INH . G 4 HOH A 1 301 95 HOH HOH . G 4 HOH A 2 302 76 HOH HOH . G 4 HOH A 3 303 64 HOH HOH . G 4 HOH A 4 304 202 HOH HOH . G 4 HOH A 5 305 27 HOH HOH . G 4 HOH A 6 306 191 HOH HOH . G 4 HOH A 7 307 205 HOH HOH . G 4 HOH A 8 308 200 HOH HOH . G 4 HOH A 9 309 36 HOH HOH . G 4 HOH A 10 310 72 HOH HOH . G 4 HOH A 11 311 222 HOH HOH . G 4 HOH A 12 312 125 HOH HOH . G 4 HOH A 13 313 140 HOH HOH . G 4 HOH A 14 314 84 HOH HOH . G 4 HOH A 15 315 171 HOH HOH . G 4 HOH A 16 316 120 HOH HOH . G 4 HOH A 17 317 208 HOH HOH . G 4 HOH A 18 318 187 HOH HOH . G 4 HOH A 19 319 66 HOH HOH . G 4 HOH A 20 320 167 HOH HOH . G 4 HOH A 21 321 216 HOH HOH . G 4 HOH A 22 322 165 HOH HOH . G 4 HOH A 23 323 16 HOH HOH . G 4 HOH A 24 324 25 HOH HOH . G 4 HOH A 25 325 154 HOH HOH . G 4 HOH A 26 326 51 HOH HOH . G 4 HOH A 27 327 176 HOH HOH . G 4 HOH A 28 328 126 HOH HOH . G 4 HOH A 29 329 67 HOH HOH . G 4 HOH A 30 330 203 HOH HOH . G 4 HOH A 31 331 14 HOH HOH . G 4 HOH A 32 332 23 HOH HOH . G 4 HOH A 33 333 6 HOH HOH . G 4 HOH A 34 334 57 HOH HOH . G 4 HOH A 35 335 134 HOH HOH . G 4 HOH A 36 336 29 HOH HOH . G 4 HOH A 37 337 135 HOH HOH . G 4 HOH A 38 338 137 HOH HOH . G 4 HOH A 39 339 55 HOH HOH . G 4 HOH A 40 340 124 HOH HOH . G 4 HOH A 41 341 88 HOH HOH . G 4 HOH A 42 342 123 HOH HOH . G 4 HOH A 43 343 8 HOH HOH . G 4 HOH A 44 344 198 HOH HOH . G 4 HOH A 45 345 24 HOH HOH . G 4 HOH A 46 346 65 HOH HOH . G 4 HOH A 47 347 93 HOH HOH . G 4 HOH A 48 348 169 HOH HOH . G 4 HOH A 49 349 110 HOH HOH . G 4 HOH A 50 350 20 HOH HOH . G 4 HOH A 51 351 13 HOH HOH . G 4 HOH A 52 352 168 HOH HOH . G 4 HOH A 53 353 18 HOH HOH . G 4 HOH A 54 354 122 HOH HOH . G 4 HOH A 55 355 108 HOH HOH . G 4 HOH A 56 356 54 HOH HOH . G 4 HOH A 57 357 204 HOH HOH . G 4 HOH A 58 358 106 HOH HOH . G 4 HOH A 59 359 201 HOH HOH . G 4 HOH A 60 360 44 HOH HOH . G 4 HOH A 61 361 98 HOH HOH . G 4 HOH A 62 362 158 HOH HOH . G 4 HOH A 63 363 157 HOH HOH . G 4 HOH A 64 364 90 HOH HOH . G 4 HOH A 65 365 78 HOH HOH . G 4 HOH A 66 366 83 HOH HOH . G 4 HOH A 67 367 17 HOH HOH . G 4 HOH A 68 368 192 HOH HOH . G 4 HOH A 69 369 47 HOH HOH . G 4 HOH A 70 370 159 HOH HOH . G 4 HOH A 71 371 109 HOH HOH . G 4 HOH A 72 372 143 HOH HOH . G 4 HOH A 73 373 46 HOH HOH . G 4 HOH A 74 374 97 HOH HOH . G 4 HOH A 75 375 94 HOH HOH . G 4 HOH A 76 376 15 HOH HOH . G 4 HOH A 77 377 70 HOH HOH . G 4 HOH A 78 378 112 HOH HOH . G 4 HOH A 79 379 1 HOH HOH . G 4 HOH A 80 380 7 HOH HOH . G 4 HOH A 81 381 39 HOH HOH . G 4 HOH A 82 382 149 HOH HOH . G 4 HOH A 83 383 105 HOH HOH . G 4 HOH A 84 384 170 HOH HOH . G 4 HOH A 85 385 101 HOH HOH . G 4 HOH A 86 386 34 HOH HOH . G 4 HOH A 87 387 63 HOH HOH . G 4 HOH A 88 388 114 HOH HOH . G 4 HOH A 89 389 162 HOH HOH . G 4 HOH A 90 390 146 HOH HOH . G 4 HOH A 91 391 156 HOH HOH . G 4 HOH A 92 392 160 HOH HOH . G 4 HOH A 93 393 151 HOH HOH . G 4 HOH A 94 394 73 HOH HOH . G 4 HOH A 95 395 172 HOH HOH . G 4 HOH A 96 396 195 HOH HOH . G 4 HOH A 97 397 71 HOH HOH . G 4 HOH A 98 398 131 HOH HOH . G 4 HOH A 99 399 184 HOH HOH . G 4 HOH A 100 400 37 HOH HOH . G 4 HOH A 101 401 102 HOH HOH . G 4 HOH A 102 402 221 HOH HOH . G 4 HOH A 103 403 89 HOH HOH . G 4 HOH A 104 404 223 HOH HOH . G 4 HOH A 105 405 141 HOH HOH . G 4 HOH A 106 406 138 HOH HOH . G 4 HOH A 107 407 186 HOH HOH . H 4 HOH B 1 301 104 HOH HOH . H 4 HOH B 2 302 92 HOH HOH . H 4 HOH B 3 303 147 HOH HOH . H 4 HOH B 4 304 59 HOH HOH . H 4 HOH B 5 305 21 HOH HOH . H 4 HOH B 6 306 173 HOH HOH . H 4 HOH B 7 307 150 HOH HOH . H 4 HOH B 8 308 48 HOH HOH . H 4 HOH B 9 309 75 HOH HOH . H 4 HOH B 10 310 85 HOH HOH . H 4 HOH B 11 311 116 HOH HOH . H 4 HOH B 12 312 49 HOH HOH . H 4 HOH B 13 313 174 HOH HOH . H 4 HOH B 14 314 155 HOH HOH . H 4 HOH B 15 315 183 HOH HOH . H 4 HOH B 16 316 91 HOH HOH . H 4 HOH B 17 317 209 HOH HOH . H 4 HOH B 18 318 132 HOH HOH . H 4 HOH B 19 319 166 HOH HOH . H 4 HOH B 20 320 81 HOH HOH . H 4 HOH B 21 321 179 HOH HOH . H 4 HOH B 22 322 144 HOH HOH . H 4 HOH B 23 323 58 HOH HOH . H 4 HOH B 24 324 214 HOH HOH . H 4 HOH B 25 325 103 HOH HOH . H 4 HOH B 26 326 218 HOH HOH . H 4 HOH B 27 327 178 HOH HOH . H 4 HOH B 28 328 3 HOH HOH . H 4 HOH B 29 329 133 HOH HOH . H 4 HOH B 30 330 53 HOH HOH . H 4 HOH B 31 331 115 HOH HOH . H 4 HOH B 32 332 12 HOH HOH . H 4 HOH B 33 333 153 HOH HOH . H 4 HOH B 34 334 188 HOH HOH . H 4 HOH B 35 335 148 HOH HOH . H 4 HOH B 36 336 41 HOH HOH . H 4 HOH B 37 337 107 HOH HOH . H 4 HOH B 38 338 177 HOH HOH . H 4 HOH B 39 339 35 HOH HOH . H 4 HOH B 40 340 211 HOH HOH . H 4 HOH B 41 341 121 HOH HOH . H 4 HOH B 42 342 111 HOH HOH . H 4 HOH B 43 343 207 HOH HOH . H 4 HOH B 44 344 56 HOH HOH . H 4 HOH B 45 345 9 HOH HOH . H 4 HOH B 46 346 11 HOH HOH . H 4 HOH B 47 347 127 HOH HOH . H 4 HOH B 48 348 33 HOH HOH . H 4 HOH B 49 349 68 HOH HOH . H 4 HOH B 50 350 4 HOH HOH . H 4 HOH B 51 351 45 HOH HOH . H 4 HOH B 52 352 190 HOH HOH . H 4 HOH B 53 353 117 HOH HOH . H 4 HOH B 54 354 43 HOH HOH . H 4 HOH B 55 355 79 HOH HOH . H 4 HOH B 56 356 19 HOH HOH . H 4 HOH B 57 357 62 HOH HOH . H 4 HOH B 58 358 163 HOH HOH . H 4 HOH B 59 359 31 HOH HOH . H 4 HOH B 60 360 52 HOH HOH . H 4 HOH B 61 361 69 HOH HOH . H 4 HOH B 62 362 61 HOH HOH . H 4 HOH B 63 363 40 HOH HOH . H 4 HOH B 64 364 182 HOH HOH . H 4 HOH B 65 365 74 HOH HOH . H 4 HOH B 66 366 32 HOH HOH . H 4 HOH B 67 367 30 HOH HOH . H 4 HOH B 68 368 80 HOH HOH . H 4 HOH B 69 369 142 HOH HOH . H 4 HOH B 70 370 128 HOH HOH . H 4 HOH B 71 371 152 HOH HOH . H 4 HOH B 72 372 26 HOH HOH . H 4 HOH B 73 373 113 HOH HOH . H 4 HOH B 74 374 118 HOH HOH . H 4 HOH B 75 375 77 HOH HOH . H 4 HOH B 76 376 164 HOH HOH . H 4 HOH B 77 377 28 HOH HOH . H 4 HOH B 78 378 161 HOH HOH . H 4 HOH B 79 379 5 HOH HOH . H 4 HOH B 80 380 42 HOH HOH . H 4 HOH B 81 381 10 HOH HOH . H 4 HOH B 82 382 130 HOH HOH . H 4 HOH B 83 383 22 HOH HOH . H 4 HOH B 84 384 185 HOH HOH . H 4 HOH B 85 385 38 HOH HOH . H 4 HOH B 86 386 99 HOH HOH . H 4 HOH B 87 387 2 HOH HOH . H 4 HOH B 88 388 119 HOH HOH . H 4 HOH B 89 389 129 HOH HOH . H 4 HOH B 90 390 96 HOH HOH . H 4 HOH B 91 391 50 HOH HOH . H 4 HOH B 92 392 197 HOH HOH . H 4 HOH B 93 393 193 HOH HOH . H 4 HOH B 94 394 180 HOH HOH . H 4 HOH B 95 395 199 HOH HOH . H 4 HOH B 96 396 194 HOH HOH . H 4 HOH B 97 397 139 HOH HOH . H 4 HOH B 98 398 181 HOH HOH . H 4 HOH B 99 399 219 HOH HOH . H 4 HOH B 100 400 145 HOH HOH . H 4 HOH B 101 401 220 HOH HOH . H 4 HOH B 102 402 210 HOH HOH . H 4 HOH B 103 403 86 HOH HOH . H 4 HOH B 104 404 87 HOH HOH . H 4 HOH B 105 405 60 HOH HOH . H 4 HOH B 106 406 136 HOH HOH . H 4 HOH B 107 407 217 HOH HOH . H 4 HOH B 108 408 175 HOH HOH . H 4 HOH B 109 409 82 HOH HOH . H 4 HOH B 110 410 196 HOH HOH . H 4 HOH B 111 411 189 HOH HOH . H 4 HOH B 112 412 215 HOH HOH . H 4 HOH B 113 413 212 HOH HOH . H 4 HOH B 114 414 206 HOH HOH . H 4 HOH B 115 415 100 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 8HN . . . D 3 11.568 2.814 3.062 1 16.33 ? C1 8HN 202 A 1 HETATM 2 C C2 8HN . . . D 3 10.536 3.754 3.05 1 15.46 ? C2 8HN 202 A 1 HETATM 3 C C3 8HN . . . D 3 9.855 4.036 1.855 1 15.4 ? C3 8HN 202 A 1 HETATM 4 N N6 8HN . . . D 3 10.139 4.395 4.236 1 15.95 ? N6 8HN 202 A 1 HETATM 5 C C7 8HN . . . D 3 14.105 2.565 -0.513 1 17.38 ? C7 8HN 202 A 1 HETATM 6 C C8 8HN . . . D 3 15.376 2.311 -1.049 1 18.15 ? C8 8HN 202 A 1 HETATM 7 C C9 8HN . . . D 3 14.463 0.807 -2.535 1 16.05 ? C9 8HN 202 A 1 HETATM 8 C C10 8HN . . . D 3 12.939 -0.371 -3.65 1 15.31 ? C10 8HN 202 A 1 HETATM 9 C C11 8HN . . . D 3 14.323 -0.172 -3.537 1 13.71 ? C11 8HN 202 A 1 HETATM 10 C C12 8HN . . . D 3 15.36 -0.905 -4.182 1 14.42 ? C12 8HN 202 A 1 HETATM 11 C C13 8HN . . . D 3 17.825 2.771 -1.183 1 22.64 ? C13 8HN 202 A 1 HETATM 12 C C14 8HN . . . D 3 18.713 3.777 -0.468 1 23.8 ? C14 8HN 202 A 1 HETATM 13 C C15 8HN . . . D 3 17.96 4.125 0.787 1 23.95 ? C15 8HN 202 A 1 HETATM 14 C C16 8HN . . . D 3 16.493 4.109 0.356 1 23.16 ? C16 8HN 202 A 1 HETATM 15 C C19 8HN . . . D 3 8.667 4.966 1.887 1 17.91 ? C19 8HN 202 A 1 HETATM 16 C C20 8HN . . . D 3 8.8 5.991 2.995 1 19.46 ? C20 8HN 202 A 1 HETATM 17 C C21 8HN . . . D 3 9.273 5.43 4.304 1 18.17 ? C21 8HN 202 A 1 HETATM 18 O O2 8HN . . . D 3 8.928 5.913 5.381 1 18.86 ? O2 8HN 202 A 1 HETATM 19 C C4 8HN . . . D 3 10.265 3.413 0.677 1 15.29 ? C4 8HN 202 A 1 HETATM 20 C C5 8HN . . . D 3 11.324 2.512 0.685 1 16.82 ? C5 8HN 202 A 1 HETATM 21 C C 8HN . . . D 3 11.968 2.208 1.883 1 15.5 ? C 8HN 202 A 1 HETATM 22 N N 8HN . . . D 3 11.725 1.91 -0.517 1 16.55 ? N 8HN 202 A 1 HETATM 23 C C6 8HN . . . D 3 12.98 1.925 -1.025 1 17.2 ? C6 8HN 202 A 1 HETATM 24 N N2 8HN . . . D 3 13.183 1.076 -2.093 1 15.85 ? N2 8HN 202 A 1 HETATM 25 N N3 8HN . . . D 3 12.224 0.381 -2.78 1 14.95 ? N3 8HN 202 A 1 HETATM 26 N N4 8HN . . . D 3 16.151 -1.523 -4.704 1 17.48 ? N4 8HN 202 A 1 HETATM 27 N N1 8HN . . . D 3 15.562 1.394 -2.026 1 17.14 ? N1 8HN 202 A 1 HETATM 28 N N5 8HN . . . D 3 16.471 3.068 -0.695 1 20.71 ? N5 8HN 202 A 1 HETATM 29 C C17 8HN . . . D 3 15.969 5.459 -0.167 1 26.84 ? C17 8HN 202 A 1 HETATM 30 C C18 8HN . . . D 3 16.172 6.589 0.826 1 31.48 ? C18 8HN 202 A 1 HETATM 31 O O1 8HN . . . D 3 15.786 6.327 2.055 1 33 ? O1 8HN 202 A 1 HETATM 32 O O 8HN . . . D 3 16.641 7.663 0.498 1 32.36 ? O 8HN 202 A 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 32 #