data_5N2G
#
_model_server_result.job_id            YID7iy7Hkm43s6PxL8p3Pg 
_model_server_result.datetime_utc      '2024-11-24 18:52:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5n2g 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":1107}' 
#
_entry.id    5N2G 
#
_exptl.entry_id    5N2G 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5N2G 
_cell.length_a            134.007 
_cell.length_b            134.007 
_cell.length_c            230.189 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5N2G 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 170 A ASP 166 1_555 E MN MN . A MN 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? 
metalc ? metalc2 A OD1 ASP 170 A ASP 166 1_555 F MN MN . A MN 1105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.965 ? 
metalc ? metalc3 A OE2 GLU 172 A GLU 168 1_555 E MN MN . A MN 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? 
metalc ? metalc4 A OD2 ASP 466 A ASP 462 1_555 E MN MN . A MN 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.704 ? 
metalc ? metalc5 A OE1 GLU 794 A GLU 790 1_555 G MN MN . A MN 1106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? 
metalc ? metalc6 A OE1 GLU 796 A GLU 792 1_555 G MN MN . A MN 1106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? 
metalc ? metalc7 A OE2 GLU 927 A GLU 923 1_555 H MN MN . A MN 1107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.786 ? 
metalc ? metalc8 E MN MN . A MN 1104 1_555 M O HOH . A HOH 1239 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? 
metalc ? metalc9 F MN MN . A MN 1105 1_555 M O HOH . A HOH 1400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.709 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5N2G 
_atom_sites.fract_transf_matrix[1][1]    0.007462 
_atom_sites.fract_transf_matrix[1][2]    0.004308 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008617 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004344 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MES A 1 1101 1 MES MES . 
C 2 MES A 1 1102 4 MES MES . 
D 2 MES A 1 1103 5 MES MES . 
E 3 MN A 1 1104 11 MN MN . 
F 3 MN A 1 1105 12 MN MN . 
G 3 MN A 1 1106 14 MN MN . 
H 3 MN A 1 1107 15 MN MN . 
I 4 GOL A 1 1108 7 GOL GOL . 
J 4 GOL A 1 1109 8 GOL GOL . 
K 5 DTT A 1 1110 6 DTT DTT . 
L 6 EPE A 1 1111 9 EPE EPE . 
M 7 HOH A 1 1201 247 HOH HOH . 
M 7 HOH A 2 1202 253 HOH HOH . 
M 7 HOH A 3 1203 59 HOH HOH . 
M 7 HOH A 4 1204 104 HOH HOH . 
M 7 HOH A 5 1205 97 HOH HOH . 
M 7 HOH A 6 1206 235 HOH HOH . 
M 7 HOH A 7 1207 5 HOH HOH . 
M 7 HOH A 8 1208 178 HOH HOH . 
M 7 HOH A 9 1209 177 HOH HOH . 
M 7 HOH A 10 1210 161 HOH HOH . 
M 7 HOH A 11 1211 29 HOH HOH . 
M 7 HOH A 12 1212 32 HOH HOH . 
M 7 HOH A 13 1213 254 HOH HOH . 
M 7 HOH A 14 1214 155 HOH HOH . 
M 7 HOH A 15 1215 176 HOH HOH . 
M 7 HOH A 16 1216 16 HOH HOH . 
M 7 HOH A 17 1217 227 HOH HOH . 
M 7 HOH A 18 1218 42 HOH HOH . 
M 7 HOH A 19 1219 58 HOH HOH . 
M 7 HOH A 20 1220 101 HOH HOH . 
M 7 HOH A 21 1221 90 HOH HOH . 
M 7 HOH A 22 1222 211 HOH HOH . 
M 7 HOH A 23 1223 27 HOH HOH . 
M 7 HOH A 24 1224 197 HOH HOH . 
M 7 HOH A 25 1225 163 HOH HOH . 
M 7 HOH A 26 1226 135 HOH HOH . 
M 7 HOH A 27 1227 47 HOH HOH . 
M 7 HOH A 28 1228 229 HOH HOH . 
M 7 HOH A 29 1229 156 HOH HOH . 
M 7 HOH A 30 1230 110 HOH HOH . 
M 7 HOH A 31 1231 154 HOH HOH . 
M 7 HOH A 32 1232 24 HOH HOH . 
M 7 HOH A 33 1233 49 HOH HOH . 
M 7 HOH A 34 1234 251 HOH HOH . 
M 7 HOH A 35 1235 14 HOH HOH . 
M 7 HOH A 36 1236 157 HOH HOH . 
M 7 HOH A 37 1237 202 HOH HOH . 
M 7 HOH A 38 1238 112 HOH HOH . 
M 7 HOH A 39 1239 2 HOH HOH . 
M 7 HOH A 40 1240 203 HOH HOH . 
M 7 HOH A 41 1241 139 HOH HOH . 
M 7 HOH A 42 1242 207 HOH HOH . 
M 7 HOH A 43 1243 134 HOH HOH . 
M 7 HOH A 44 1244 26 HOH HOH . 
M 7 HOH A 45 1245 245 HOH HOH . 
M 7 HOH A 46 1246 99 HOH HOH . 
M 7 HOH A 47 1247 41 HOH HOH . 
M 7 HOH A 48 1248 160 HOH HOH . 
M 7 HOH A 49 1249 78 HOH HOH . 
M 7 HOH A 50 1250 63 HOH HOH . 
M 7 HOH A 51 1251 18 HOH HOH . 
M 7 HOH A 52 1252 30 HOH HOH . 
M 7 HOH A 53 1253 224 HOH HOH . 
M 7 HOH A 54 1254 82 HOH HOH . 
M 7 HOH A 55 1255 38 HOH HOH . 
M 7 HOH A 56 1256 103 HOH HOH . 
M 7 HOH A 57 1257 22 HOH HOH . 
M 7 HOH A 58 1258 214 HOH HOH . 
M 7 HOH A 59 1259 208 HOH HOH . 
M 7 HOH A 60 1260 239 HOH HOH . 
M 7 HOH A 61 1261 114 HOH HOH . 
M 7 HOH A 62 1262 186 HOH HOH . 
M 7 HOH A 63 1263 216 HOH HOH . 
M 7 HOH A 64 1264 25 HOH HOH . 
M 7 HOH A 65 1265 15 HOH HOH . 
M 7 HOH A 66 1266 66 HOH HOH . 
M 7 HOH A 67 1267 7 HOH HOH . 
M 7 HOH A 68 1268 11 HOH HOH . 
M 7 HOH A 69 1269 218 HOH HOH . 
M 7 HOH A 70 1270 131 HOH HOH . 
M 7 HOH A 71 1271 241 HOH HOH . 
M 7 HOH A 72 1272 40 HOH HOH . 
M 7 HOH A 73 1273 248 HOH HOH . 
M 7 HOH A 74 1274 184 HOH HOH . 
M 7 HOH A 75 1275 142 HOH HOH . 
M 7 HOH A 76 1276 236 HOH HOH . 
M 7 HOH A 77 1277 35 HOH HOH . 
M 7 HOH A 78 1278 206 HOH HOH . 
M 7 HOH A 79 1279 170 HOH HOH . 
M 7 HOH A 80 1280 158 HOH HOH . 
M 7 HOH A 81 1281 88 HOH HOH . 
M 7 HOH A 82 1282 17 HOH HOH . 
M 7 HOH A 83 1283 141 HOH HOH . 
M 7 HOH A 84 1284 44 HOH HOH . 
M 7 HOH A 85 1285 193 HOH HOH . 
M 7 HOH A 86 1286 252 HOH HOH . 
M 7 HOH A 87 1287 125 HOH HOH . 
M 7 HOH A 88 1288 145 HOH HOH . 
M 7 HOH A 89 1289 127 HOH HOH . 
M 7 HOH A 90 1290 137 HOH HOH . 
M 7 HOH A 91 1291 37 HOH HOH . 
M 7 HOH A 92 1292 233 HOH HOH . 
M 7 HOH A 93 1293 183 HOH HOH . 
M 7 HOH A 94 1294 8 HOH HOH . 
M 7 HOH A 95 1295 10 HOH HOH . 
M 7 HOH A 96 1296 230 HOH HOH . 
M 7 HOH A 97 1297 215 HOH HOH . 
M 7 HOH A 98 1298 220 HOH HOH . 
M 7 HOH A 99 1299 201 HOH HOH . 
M 7 HOH A 100 1300 13 HOH HOH . 
M 7 HOH A 101 1301 20 HOH HOH . 
M 7 HOH A 102 1302 94 HOH HOH . 
M 7 HOH A 103 1303 23 HOH HOH . 
M 7 HOH A 104 1304 45 HOH HOH . 
M 7 HOH A 105 1305 182 HOH HOH . 
M 7 HOH A 106 1306 234 HOH HOH . 
M 7 HOH A 107 1307 223 HOH HOH . 
M 7 HOH A 108 1308 232 HOH HOH . 
M 7 HOH A 109 1309 169 HOH HOH . 
M 7 HOH A 110 1310 189 HOH HOH . 
M 7 HOH A 111 1311 166 HOH HOH . 
M 7 HOH A 112 1312 165 HOH HOH . 
M 7 HOH A 113 1313 185 HOH HOH . 
M 7 HOH A 114 1314 33 HOH HOH . 
M 7 HOH A 115 1315 126 HOH HOH . 
M 7 HOH A 116 1316 150 HOH HOH . 
M 7 HOH A 117 1317 159 HOH HOH . 
M 7 HOH A 118 1318 50 HOH HOH . 
M 7 HOH A 119 1319 105 HOH HOH . 
M 7 HOH A 120 1320 54 HOH HOH . 
M 7 HOH A 121 1321 243 HOH HOH . 
M 7 HOH A 122 1322 12 HOH HOH . 
M 7 HOH A 123 1323 162 HOH HOH . 
M 7 HOH A 124 1324 36 HOH HOH . 
M 7 HOH A 125 1325 136 HOH HOH . 
M 7 HOH A 126 1326 56 HOH HOH . 
M 7 HOH A 127 1327 180 HOH HOH . 
M 7 HOH A 128 1328 132 HOH HOH . 
M 7 HOH A 129 1329 48 HOH HOH . 
M 7 HOH A 130 1330 108 HOH HOH . 
M 7 HOH A 131 1331 149 HOH HOH . 
M 7 HOH A 132 1332 172 HOH HOH . 
M 7 HOH A 133 1333 28 HOH HOH . 
M 7 HOH A 134 1334 123 HOH HOH . 
M 7 HOH A 135 1335 9 HOH HOH . 
M 7 HOH A 136 1336 188 HOH HOH . 
M 7 HOH A 137 1337 64 HOH HOH . 
M 7 HOH A 138 1338 195 HOH HOH . 
M 7 HOH A 139 1339 3 HOH HOH . 
M 7 HOH A 140 1340 174 HOH HOH . 
M 7 HOH A 141 1341 34 HOH HOH . 
M 7 HOH A 142 1342 175 HOH HOH . 
M 7 HOH A 143 1343 71 HOH HOH . 
M 7 HOH A 144 1344 102 HOH HOH . 
M 7 HOH A 145 1345 4 HOH HOH . 
M 7 HOH A 146 1346 98 HOH HOH . 
M 7 HOH A 147 1347 21 HOH HOH . 
M 7 HOH A 148 1348 92 HOH HOH . 
M 7 HOH A 149 1349 85 HOH HOH . 
M 7 HOH A 150 1350 70 HOH HOH . 
M 7 HOH A 151 1351 113 HOH HOH . 
M 7 HOH A 152 1352 72 HOH HOH . 
M 7 HOH A 153 1353 116 HOH HOH . 
M 7 HOH A 154 1354 57 HOH HOH . 
M 7 HOH A 155 1355 106 HOH HOH . 
M 7 HOH A 156 1356 111 HOH HOH . 
M 7 HOH A 157 1357 74 HOH HOH . 
M 7 HOH A 158 1358 167 HOH HOH . 
M 7 HOH A 159 1359 77 HOH HOH . 
M 7 HOH A 160 1360 151 HOH HOH . 
M 7 HOH A 161 1361 76 HOH HOH . 
M 7 HOH A 162 1362 65 HOH HOH . 
M 7 HOH A 163 1363 198 HOH HOH . 
M 7 HOH A 164 1364 93 HOH HOH . 
M 7 HOH A 165 1365 122 HOH HOH . 
M 7 HOH A 166 1366 75 HOH HOH . 
M 7 HOH A 167 1367 138 HOH HOH . 
M 7 HOH A 168 1368 219 HOH HOH . 
M 7 HOH A 169 1369 89 HOH HOH . 
M 7 HOH A 170 1370 86 HOH HOH . 
M 7 HOH A 171 1371 246 HOH HOH . 
M 7 HOH A 172 1372 226 HOH HOH . 
M 7 HOH A 173 1373 87 HOH HOH . 
M 7 HOH A 174 1374 81 HOH HOH . 
M 7 HOH A 175 1375 19 HOH HOH . 
M 7 HOH A 176 1376 152 HOH HOH . 
M 7 HOH A 177 1377 171 HOH HOH . 
M 7 HOH A 178 1378 187 HOH HOH . 
M 7 HOH A 179 1379 181 HOH HOH . 
M 7 HOH A 180 1380 168 HOH HOH . 
M 7 HOH A 181 1381 231 HOH HOH . 
M 7 HOH A 182 1382 100 HOH HOH . 
M 7 HOH A 183 1383 190 HOH HOH . 
M 7 HOH A 184 1384 96 HOH HOH . 
M 7 HOH A 185 1385 191 HOH HOH . 
M 7 HOH A 186 1386 55 HOH HOH . 
M 7 HOH A 187 1387 200 HOH HOH . 
M 7 HOH A 188 1388 196 HOH HOH . 
M 7 HOH A 189 1389 204 HOH HOH . 
M 7 HOH A 190 1390 238 HOH HOH . 
M 7 HOH A 191 1391 240 HOH HOH . 
M 7 HOH A 192 1392 225 HOH HOH . 
M 7 HOH A 193 1393 80 HOH HOH . 
M 7 HOH A 194 1394 62 HOH HOH . 
M 7 HOH A 195 1395 67 HOH HOH . 
M 7 HOH A 196 1396 84 HOH HOH . 
M 7 HOH A 197 1397 79 HOH HOH . 
M 7 HOH A 198 1398 69 HOH HOH . 
M 7 HOH A 199 1399 173 HOH HOH . 
M 7 HOH A 200 1400 255 HOH HOH . 
M 7 HOH A 201 1401 61 HOH HOH . 
M 7 HOH A 202 1402 153 HOH HOH . 
M 7 HOH A 203 1403 60 HOH HOH . 
M 7 HOH A 204 1404 121 HOH HOH . 
M 7 HOH A 205 1405 192 HOH HOH . 
M 7 HOH A 206 1406 68 HOH HOH . 
M 7 HOH A 207 1407 83 HOH HOH . 
M 7 HOH A 208 1408 73 HOH HOH . 
M 7 HOH A 209 1409 51 HOH HOH . 
M 7 HOH A 210 1410 228 HOH HOH . 
M 7 HOH A 211 1411 129 HOH HOH . 
M 7 HOH A 212 1412 31 HOH HOH . 
M 7 HOH A 213 1413 212 HOH HOH . 
M 7 HOH A 214 1414 213 HOH HOH . 
M 7 HOH A 215 1415 164 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         H 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -66.734 
_atom_site.Cartn_y               -14.721 
_atom_site.Cartn_z               23.005 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        86.12 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           1107 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           73 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           322 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           1 
#