data_5N2M
#
_model_server_result.job_id            h-akSAVsvEgZL-Ln8v3Vng 
_model_server_result.datetime_utc      '2024-11-22 00:24:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5n2m 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":203}' 
#
_entry.id    5N2M 
#
_exptl.entry_id    5N2M 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5N2M 
_cell.length_a            38.797 
_cell.length_b            42.09 
_cell.length_c            92.576 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5N2M 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 145 n n 
C1 C2 EDO sing 146 n n 
C1 H11 EDO sing 147 n n 
C1 H12 EDO sing 148 n n 
O1 HO1 EDO sing 149 n n 
C2 O2 EDO sing 150 n n 
C2 H21 EDO sing 151 n n 
C2 H22 EDO sing 152 n n 
O2 HO2 EDO sing 153 n n 
#
_atom_sites.entry_id                     5N2M 
_atom_sites.fract_transf_matrix[1][1]    0.025775 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023759 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010802 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 8J2 A 1 201 1 8J2 XXX . 
C 3 EDO A 1 202 1 EDO EDO . 
D 3 EDO A 1 203 2 EDO EDO . 
E 4 HOH A 1 301 51 HOH HOH . 
E 4 HOH A 2 302 136 HOH HOH . 
E 4 HOH A 3 303 178 HOH HOH . 
E 4 HOH A 4 304 23 HOH HOH . 
E 4 HOH A 5 305 156 HOH HOH . 
E 4 HOH A 6 306 39 HOH HOH . 
E 4 HOH A 7 307 83 HOH HOH . 
E 4 HOH A 8 308 181 HOH HOH . 
E 4 HOH A 9 309 98 HOH HOH . 
E 4 HOH A 10 310 44 HOH HOH . 
E 4 HOH A 11 311 76 HOH HOH . 
E 4 HOH A 12 312 32 HOH HOH . 
E 4 HOH A 13 313 58 HOH HOH . 
E 4 HOH A 14 314 5 HOH HOH . 
E 4 HOH A 15 315 17 HOH HOH . 
E 4 HOH A 16 316 167 HOH HOH . 
E 4 HOH A 17 317 75 HOH HOH . 
E 4 HOH A 18 318 80 HOH HOH . 
E 4 HOH A 19 319 103 HOH HOH . 
E 4 HOH A 20 320 113 HOH HOH . 
E 4 HOH A 21 321 7 HOH HOH . 
E 4 HOH A 22 322 47 HOH HOH . 
E 4 HOH A 23 323 61 HOH HOH . 
E 4 HOH A 24 324 88 HOH HOH . 
E 4 HOH A 25 325 15 HOH HOH . 
E 4 HOH A 26 326 132 HOH HOH . 
E 4 HOH A 27 327 40 HOH HOH . 
E 4 HOH A 28 328 2 HOH HOH . 
E 4 HOH A 29 329 152 HOH HOH . 
E 4 HOH A 30 330 30 HOH HOH . 
E 4 HOH A 31 331 64 HOH HOH . 
E 4 HOH A 32 332 112 HOH HOH . 
E 4 HOH A 33 333 114 HOH HOH . 
E 4 HOH A 34 334 177 HOH HOH . 
E 4 HOH A 35 335 60 HOH HOH . 
E 4 HOH A 36 336 109 HOH HOH . 
E 4 HOH A 37 337 123 HOH HOH . 
E 4 HOH A 38 338 99 HOH HOH . 
E 4 HOH A 39 339 37 HOH HOH . 
E 4 HOH A 40 340 54 HOH HOH . 
E 4 HOH A 41 341 130 HOH HOH . 
E 4 HOH A 42 342 90 HOH HOH . 
E 4 HOH A 43 343 147 HOH HOH . 
E 4 HOH A 44 344 9 HOH HOH . 
E 4 HOH A 45 345 14 HOH HOH . 
E 4 HOH A 46 346 10 HOH HOH . 
E 4 HOH A 47 347 78 HOH HOH . 
E 4 HOH A 48 348 66 HOH HOH . 
E 4 HOH A 49 349 104 HOH HOH . 
E 4 HOH A 50 350 49 HOH HOH . 
E 4 HOH A 51 351 81 HOH HOH . 
E 4 HOH A 52 352 18 HOH HOH . 
E 4 HOH A 53 353 135 HOH HOH . 
E 4 HOH A 54 354 138 HOH HOH . 
E 4 HOH A 55 355 3 HOH HOH . 
E 4 HOH A 56 356 170 HOH HOH . 
E 4 HOH A 57 357 115 HOH HOH . 
E 4 HOH A 58 358 19 HOH HOH . 
E 4 HOH A 59 359 129 HOH HOH . 
E 4 HOH A 60 360 28 HOH HOH . 
E 4 HOH A 61 361 77 HOH HOH . 
E 4 HOH A 62 362 12 HOH HOH . 
E 4 HOH A 63 363 62 HOH HOH . 
E 4 HOH A 64 364 141 HOH HOH . 
E 4 HOH A 65 365 4 HOH HOH . 
E 4 HOH A 66 366 13 HOH HOH . 
E 4 HOH A 67 367 86 HOH HOH . 
E 4 HOH A 68 368 46 HOH HOH . 
E 4 HOH A 69 369 6 HOH HOH . 
E 4 HOH A 70 370 33 HOH HOH . 
E 4 HOH A 71 371 140 HOH HOH . 
E 4 HOH A 72 372 180 HOH HOH . 
E 4 HOH A 73 373 142 HOH HOH . 
E 4 HOH A 74 374 149 HOH HOH . 
E 4 HOH A 75 375 20 HOH HOH . 
E 4 HOH A 76 376 171 HOH HOH . 
E 4 HOH A 77 377 165 HOH HOH . 
E 4 HOH A 78 378 71 HOH HOH . 
E 4 HOH A 79 379 11 HOH HOH . 
E 4 HOH A 80 380 125 HOH HOH . 
E 4 HOH A 81 381 52 HOH HOH . 
E 4 HOH A 82 382 162 HOH HOH . 
E 4 HOH A 83 383 16 HOH HOH . 
E 4 HOH A 84 384 131 HOH HOH . 
E 4 HOH A 85 385 111 HOH HOH . 
E 4 HOH A 86 386 161 HOH HOH . 
E 4 HOH A 87 387 26 HOH HOH . 
E 4 HOH A 88 388 34 HOH HOH . 
E 4 HOH A 89 389 97 HOH HOH . 
E 4 HOH A 90 390 154 HOH HOH . 
E 4 HOH A 91 391 87 HOH HOH . 
E 4 HOH A 92 392 29 HOH HOH . 
E 4 HOH A 93 393 124 HOH HOH . 
E 4 HOH A 94 394 1 HOH HOH . 
E 4 HOH A 95 395 57 HOH HOH . 
E 4 HOH A 96 396 174 HOH HOH . 
E 4 HOH A 97 397 22 HOH HOH . 
E 4 HOH A 98 398 148 HOH HOH . 
E 4 HOH A 99 399 69 HOH HOH . 
E 4 HOH A 100 400 38 HOH HOH . 
E 4 HOH A 101 401 163 HOH HOH . 
E 4 HOH A 102 402 8 HOH HOH . 
E 4 HOH A 103 403 43 HOH HOH . 
E 4 HOH A 104 404 41 HOH HOH . 
E 4 HOH A 105 405 21 HOH HOH . 
E 4 HOH A 106 406 107 HOH HOH . 
E 4 HOH A 107 407 79 HOH HOH . 
E 4 HOH A 108 408 53 HOH HOH . 
E 4 HOH A 109 409 45 HOH HOH . 
E 4 HOH A 110 410 85 HOH HOH . 
E 4 HOH A 111 411 67 HOH HOH . 
E 4 HOH A 112 412 27 HOH HOH . 
E 4 HOH A 113 413 160 HOH HOH . 
E 4 HOH A 114 414 36 HOH HOH . 
E 4 HOH A 115 415 73 HOH HOH . 
E 4 HOH A 116 416 106 HOH HOH . 
E 4 HOH A 117 417 105 HOH HOH . 
E 4 HOH A 118 418 56 HOH HOH . 
E 4 HOH A 119 419 35 HOH HOH . 
E 4 HOH A 120 420 121 HOH HOH . 
E 4 HOH A 121 421 25 HOH HOH . 
E 4 HOH A 122 422 42 HOH HOH . 
E 4 HOH A 123 423 151 HOH HOH . 
E 4 HOH A 124 424 102 HOH HOH . 
E 4 HOH A 125 425 139 HOH HOH . 
E 4 HOH A 126 426 182 HOH HOH . 
E 4 HOH A 127 427 144 HOH HOH . 
E 4 HOH A 128 428 55 HOH HOH . 
E 4 HOH A 129 429 128 HOH HOH . 
E 4 HOH A 130 430 92 HOH HOH . 
E 4 HOH A 131 431 89 HOH HOH . 
E 4 HOH A 132 432 186 HOH HOH . 
E 4 HOH A 133 433 118 HOH HOH . 
E 4 HOH A 134 434 93 HOH HOH . 
E 4 HOH A 135 435 31 HOH HOH . 
E 4 HOH A 136 436 183 HOH HOH . 
E 4 HOH A 137 437 59 HOH HOH . 
E 4 HOH A 138 438 116 HOH HOH . 
E 4 HOH A 139 439 74 HOH HOH . 
E 4 HOH A 140 440 120 HOH HOH . 
E 4 HOH A 141 441 94 HOH HOH . 
E 4 HOH A 142 442 166 HOH HOH . 
E 4 HOH A 143 443 143 HOH HOH . 
E 4 HOH A 144 444 68 HOH HOH . 
E 4 HOH A 145 445 95 HOH HOH . 
E 4 HOH A 146 446 158 HOH HOH . 
E 4 HOH A 147 447 153 HOH HOH . 
E 4 HOH A 148 448 63 HOH HOH . 
E 4 HOH A 149 449 145 HOH HOH . 
E 4 HOH A 150 450 50 HOH HOH . 
E 4 HOH A 151 451 119 HOH HOH . 
E 4 HOH A 152 452 127 HOH HOH . 
E 4 HOH A 153 453 100 HOH HOH . 
E 4 HOH A 154 454 172 HOH HOH . 
E 4 HOH A 155 455 110 HOH HOH . 
E 4 HOH A 156 456 101 HOH HOH . 
E 4 HOH A 157 457 169 HOH HOH . 
E 4 HOH A 158 458 24 HOH HOH . 
E 4 HOH A 159 459 164 HOH HOH . 
E 4 HOH A 160 460 96 HOH HOH . 
E 4 HOH A 161 461 185 HOH HOH . 
E 4 HOH A 162 462 65 HOH HOH . 
E 4 HOH A 163 463 146 HOH HOH . 
E 4 HOH A 164 464 82 HOH HOH . 
E 4 HOH A 165 465 159 HOH HOH . 
E 4 HOH A 166 466 72 HOH HOH . 
E 4 HOH A 167 467 117 HOH HOH . 
E 4 HOH A 168 468 48 HOH HOH . 
E 4 HOH A 169 469 176 HOH HOH . 
E 4 HOH A 170 470 157 HOH HOH . 
E 4 HOH A 171 471 122 HOH HOH . 
E 4 HOH A 172 472 108 HOH HOH . 
E 4 HOH A 173 473 137 HOH HOH . 
E 4 HOH A 174 474 179 HOH HOH . 
E 4 HOH A 175 475 126 HOH HOH . 
E 4 HOH A 176 476 150 HOH HOH . 
E 4 HOH A 177 477 184 HOH HOH . 
E 4 HOH A 178 478 91 HOH HOH . 
E 4 HOH A 179 479 155 HOH HOH . 
E 4 HOH A 180 480 134 HOH HOH . 
E 4 HOH A 181 481 168 HOH HOH . 
E 4 HOH A 182 482 84 HOH HOH . 
E 4 HOH A 183 483 70 HOH HOH . 
E 4 HOH A 184 484 175 HOH HOH . 
E 4 HOH A 185 485 133 HOH HOH . 
E 4 HOH A 186 486 173 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 3 3.843 2.181 37.078 1 18.89 ? C1 EDO 203 A 1 
HETATM 2 O O1 EDO . . . D 3 3.462 1.03 36.462 1 17.22 ? O1 EDO 203 A 1 
HETATM 3 C C2 EDO . . . D 3 5.288 2.076 37.341 1 18.85 ? C2 EDO 203 A 1 
HETATM 4 O O2 EDO . . . D 3 5.894 3.037 36.471 1 21.94 ? O2 EDO 203 A 1 
#
_model_server_stats.io_time_ms              5 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    1 
_model_server_stats.query_time_ms           244 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#