data_5N2R
#
_model_server_result.job_id            zdt69Y67zs0ADglBkZ0isQ 
_model_server_result.datetime_utc      '2024-11-16 23:45:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5n2r 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":2400}' 
#
_entry.id    5N2R 
#
_exptl.entry_id    5N2R 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5N2R 
_cell.length_a            39.254 
_cell.length_b            180.739 
_cell.length_c            140.641 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5N2R 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 80 A CYS 71 1_555 A SG CYS 168 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf2 A SG CYS 83 A CYS 74 1_555 A SG CYS 155 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf3 A SG CYS 86 A CYS 77 1_555 A SG CYS 175 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf4 A SG CYS 364 A CYS 259 1_555 A SG CYS 367 A CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
metalc ? metalc1 A OD1 ASP 61 A ASP 52 1_555 B NA NA . A NA 2400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? 
metalc ? metalc2 A OG SER 100 A SER 91 1_555 B NA NA . A NA 2400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? 
metalc ? metalc3 B NA NA . A NA 2400 1_555 HA O HOH . A HOH 2514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? 
metalc ? metalc4 B NA NA . A NA 2400 1_555 HA O HOH . A HOH 2534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5N2R 
_atom_sites.fract_transf_matrix[1][1]    0.025475 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005533 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00711 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NA A 1 2400 2400 NA NA . 
C 3 8JN A 1 2401 2401 8JN PSB . 
D 4 CLR A 1 2402 2402 CLR CLR . 
E 4 CLR A 1 2403 2403 CLR CLR . 
F 4 CLR A 1 2404 2404 CLR CLR . 
G 5 OLA A 1 2405 2405 OLA OLA . 
H 5 OLA A 1 2406 2406 OLA OLA . 
I 5 OLA A 1 2407 2407 OLA OLA . 
J 5 OLA A 1 2408 2408 OLA OLA . 
K 5 OLA A 1 2409 2409 OLA OLA . 
L 5 OLA A 1 2410 2410 OLA OLA . 
M 5 OLA A 1 2411 2411 OLA OLA . 
N 5 OLA A 1 2412 2412 OLA OLA . 
O 5 OLA A 1 2413 2413 OLA OLA . 
P 5 OLA A 1 2414 2414 OLA OLA . 
Q 5 OLA A 1 2415 2415 OLA OLA . 
R 5 OLA A 1 2416 2416 OLA OLA . 
S 5 OLA A 1 2417 2417 OLA OLA . 
T 5 OLA A 1 2418 2418 OLA OLA . 
U 5 OLA A 1 2419 2419 OLA OLA . 
V 5 OLA A 1 2420 2420 OLA OLA . 
W 5 OLA A 1 2421 2421 OLA OLA . 
X 5 OLA A 1 2422 2422 OLA OLA . 
Y 5 OLA A 1 2423 2423 OLA OLA . 
Z 5 OLA A 1 2424 2424 OLA OLA . 
AA 5 OLA A 1 2425 2425 OLA OLA . 
BA 6 OLC A 1 2426 2426 OLC OLC . 
CA 6 OLC A 1 2427 2427 OLC OLC . 
DA 6 OLC A 1 2428 2428 OLC OLC . 
EA 6 OLC A 1 2429 2429 OLC OLC . 
FA 6 OLC A 1 2430 2430 OLC OLC . 
GA 7 TAR A 1 2431 2431 TAR TAR . 
HA 8 HOH A 1 2501 16 HOH HOH . 
HA 8 HOH A 2 2502 10 HOH HOH . 
HA 8 HOH A 3 2503 32 HOH HOH . 
HA 8 HOH A 4 2504 29 HOH HOH . 
HA 8 HOH A 5 2505 3 HOH HOH . 
HA 8 HOH A 6 2506 12 HOH HOH . 
HA 8 HOH A 7 2507 14 HOH HOH . 
HA 8 HOH A 8 2508 30 HOH HOH . 
HA 8 HOH A 9 2509 1 HOH HOH . 
HA 8 HOH A 10 2510 17 HOH HOH . 
HA 8 HOH A 11 2511 25 HOH HOH . 
HA 8 HOH A 12 2512 7 HOH HOH . 
HA 8 HOH A 13 2513 11 HOH HOH . 
HA 8 HOH A 14 2514 20 HOH HOH . 
HA 8 HOH A 15 2515 22 HOH HOH . 
HA 8 HOH A 16 2516 34 HOH HOH . 
HA 8 HOH A 17 2517 4 HOH HOH . 
HA 8 HOH A 18 2518 13 HOH HOH . 
HA 8 HOH A 19 2519 31 HOH HOH . 
HA 8 HOH A 20 2520 26 HOH HOH . 
HA 8 HOH A 21 2521 18 HOH HOH . 
HA 8 HOH A 22 2522 15 HOH HOH . 
HA 8 HOH A 23 2523 27 HOH HOH . 
HA 8 HOH A 24 2524 37 HOH HOH . 
HA 8 HOH A 25 2525 28 HOH HOH . 
HA 8 HOH A 26 2526 9 HOH HOH . 
HA 8 HOH A 27 2527 36 HOH HOH . 
HA 8 HOH A 28 2528 2 HOH HOH . 
HA 8 HOH A 29 2529 8 HOH HOH . 
HA 8 HOH A 30 2530 23 HOH HOH . 
HA 8 HOH A 31 2531 5 HOH HOH . 
HA 8 HOH A 32 2532 21 HOH HOH . 
HA 8 HOH A 33 2533 35 HOH HOH . 
HA 8 HOH A 34 2534 19 HOH HOH . 
HA 8 HOH A 35 2535 24 HOH HOH . 
HA 8 HOH A 36 2536 33 HOH HOH . 
HA 8 HOH A 37 2537 6 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               23.198 
_atom_site.Cartn_y               189.53 
_atom_site.Cartn_z               16.658 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        62.78 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           2400 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#