data_5N4V
#
_model_server_result.job_id            Bn3cRBOiRn_Z2UI0eyWb1g 
_model_server_result.datetime_utc      '2025-01-10 07:38:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5n4v 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    5N4V 
#
_exptl.entry_id    5N4V 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              248.301 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-cyclopropyl-4,5-dimethyl-thieno[2,3-d]pyrimidine-6-carboxylic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5N4V 
_cell.length_a            98.055 
_cell.length_b            98.055 
_cell.length_c            80.493 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5N4V 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C12 H12 N2 O2 S' 
_chem_comp.formula_weight    248.301 
_chem_comp.id                8MW 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-cyclopropyl-4,5-dimethyl-thieno[2,3-d]pyrimidine-6-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C7 8MW doub 1 n n 
C7 O 8MW sing 2 n n 
C7 C6 8MW sing 3 n n 
S C6 8MW sing 4 n y 
S C5 8MW sing 5 n y 
C6 C1 8MW doub 6 n y 
C5 N1 8MW doub 7 n y 
C5 C2 8MW sing 8 n y 
C1 C 8MW sing 9 n n 
C1 C2 8MW sing 10 n y 
N1 C4 8MW sing 11 n y 
C2 C3 8MW doub 12 n y 
C10 C9 8MW sing 13 n n 
C10 C8 8MW sing 14 n n 
C4 C8 8MW sing 15 n n 
C4 N 8MW doub 16 n y 
C9 C8 8MW sing 17 n n 
C3 N 8MW sing 18 n y 
C3 C11 8MW sing 19 n n 
C8 H1 8MW sing 20 n n 
C9 H2 8MW sing 21 n n 
C9 H3 8MW sing 22 n n 
C10 H4 8MW sing 23 n n 
C10 H5 8MW sing 24 n n 
C11 H6 8MW sing 25 n n 
C11 H7 8MW sing 26 n n 
C11 H8 8MW sing 27 n n 
O H9 8MW sing 28 n n 
C H10 8MW sing 29 n n 
C H11 8MW sing 30 n n 
C H12 8MW sing 31 n n 
#
_atom_sites.entry_id                     5N4V 
_atom_sites.fract_transf_matrix[1][1]    0.010198 
_atom_sites.fract_transf_matrix[1][2]    0.005888 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011776 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012423 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 8MW A 1 401 1 8MW XXX . 
D 4 GOL A 1 402 1 GOL GOL . 
E 5 HOH A 1 501 86 HOH HOH . 
E 5 HOH A 2 502 161 HOH HOH . 
E 5 HOH A 3 503 111 HOH HOH . 
E 5 HOH A 4 504 87 HOH HOH . 
E 5 HOH A 5 505 121 HOH HOH . 
E 5 HOH A 6 506 139 HOH HOH . 
E 5 HOH A 7 507 155 HOH HOH . 
E 5 HOH A 8 508 36 HOH HOH . 
E 5 HOH A 9 509 16 HOH HOH . 
E 5 HOH A 10 510 61 HOH HOH . 
E 5 HOH A 11 511 91 HOH HOH . 
E 5 HOH A 12 512 42 HOH HOH . 
E 5 HOH A 13 513 48 HOH HOH . 
E 5 HOH A 14 514 88 HOH HOH . 
E 5 HOH A 15 515 77 HOH HOH . 
E 5 HOH A 16 516 162 HOH HOH . 
E 5 HOH A 17 517 150 HOH HOH . 
E 5 HOH A 18 518 109 HOH HOH . 
E 5 HOH A 19 519 137 HOH HOH . 
E 5 HOH A 20 520 57 HOH HOH . 
E 5 HOH A 21 521 144 HOH HOH . 
E 5 HOH A 22 522 100 HOH HOH . 
E 5 HOH A 23 523 58 HOH HOH . 
E 5 HOH A 24 524 51 HOH HOH . 
E 5 HOH A 25 525 97 HOH HOH . 
E 5 HOH A 26 526 7 HOH HOH . 
E 5 HOH A 27 527 39 HOH HOH . 
E 5 HOH A 28 528 143 HOH HOH . 
E 5 HOH A 29 529 27 HOH HOH . 
E 5 HOH A 30 530 26 HOH HOH . 
E 5 HOH A 31 531 106 HOH HOH . 
E 5 HOH A 32 532 101 HOH HOH . 
E 5 HOH A 33 533 151 HOH HOH . 
E 5 HOH A 34 534 112 HOH HOH . 
E 5 HOH A 35 535 131 HOH HOH . 
E 5 HOH A 36 536 2 HOH HOH . 
E 5 HOH A 37 537 69 HOH HOH . 
E 5 HOH A 38 538 54 HOH HOH . 
E 5 HOH A 39 539 17 HOH HOH . 
E 5 HOH A 40 540 55 HOH HOH . 
E 5 HOH A 41 541 3 HOH HOH . 
E 5 HOH A 42 542 147 HOH HOH . 
E 5 HOH A 43 543 68 HOH HOH . 
E 5 HOH A 44 544 80 HOH HOH . 
E 5 HOH A 45 545 60 HOH HOH . 
E 5 HOH A 46 546 71 HOH HOH . 
E 5 HOH A 47 547 46 HOH HOH . 
E 5 HOH A 48 548 37 HOH HOH . 
E 5 HOH A 49 549 6 HOH HOH . 
E 5 HOH A 50 550 116 HOH HOH . 
E 5 HOH A 51 551 4 HOH HOH . 
E 5 HOH A 52 552 19 HOH HOH . 
E 5 HOH A 53 553 158 HOH HOH . 
E 5 HOH A 54 554 35 HOH HOH . 
E 5 HOH A 55 555 96 HOH HOH . 
E 5 HOH A 56 556 5 HOH HOH . 
E 5 HOH A 57 557 78 HOH HOH . 
E 5 HOH A 58 558 1 HOH HOH . 
E 5 HOH A 59 559 49 HOH HOH . 
E 5 HOH A 60 560 142 HOH HOH . 
E 5 HOH A 61 561 67 HOH HOH . 
E 5 HOH A 62 562 8 HOH HOH . 
E 5 HOH A 63 563 13 HOH HOH . 
E 5 HOH A 64 564 62 HOH HOH . 
E 5 HOH A 65 565 128 HOH HOH . 
E 5 HOH A 66 566 129 HOH HOH . 
E 5 HOH A 67 567 70 HOH HOH . 
E 5 HOH A 68 568 90 HOH HOH . 
E 5 HOH A 69 569 98 HOH HOH . 
E 5 HOH A 70 570 136 HOH HOH . 
E 5 HOH A 71 571 15 HOH HOH . 
E 5 HOH A 72 572 122 HOH HOH . 
E 5 HOH A 73 573 33 HOH HOH . 
E 5 HOH A 74 574 81 HOH HOH . 
E 5 HOH A 75 575 22 HOH HOH . 
E 5 HOH A 76 576 113 HOH HOH . 
E 5 HOH A 77 577 141 HOH HOH . 
E 5 HOH A 78 578 41 HOH HOH . 
E 5 HOH A 79 579 132 HOH HOH . 
E 5 HOH A 80 580 56 HOH HOH . 
E 5 HOH A 81 581 23 HOH HOH . 
E 5 HOH A 82 582 127 HOH HOH . 
E 5 HOH A 83 583 45 HOH HOH . 
E 5 HOH A 84 584 47 HOH HOH . 
E 5 HOH A 85 585 53 HOH HOH . 
E 5 HOH A 86 586 76 HOH HOH . 
E 5 HOH A 87 587 21 HOH HOH . 
E 5 HOH A 88 588 73 HOH HOH . 
E 5 HOH A 89 589 102 HOH HOH . 
E 5 HOH A 90 590 50 HOH HOH . 
E 5 HOH A 91 591 25 HOH HOH . 
E 5 HOH A 92 592 40 HOH HOH . 
E 5 HOH A 93 593 74 HOH HOH . 
E 5 HOH A 94 594 135 HOH HOH . 
E 5 HOH A 95 595 31 HOH HOH . 
E 5 HOH A 96 596 43 HOH HOH . 
E 5 HOH A 97 597 83 HOH HOH . 
E 5 HOH A 98 598 124 HOH HOH . 
E 5 HOH A 99 599 92 HOH HOH . 
E 5 HOH A 100 600 11 HOH HOH . 
E 5 HOH A 101 601 89 HOH HOH . 
E 5 HOH A 102 602 156 HOH HOH . 
E 5 HOH A 103 603 118 HOH HOH . 
E 5 HOH A 104 604 134 HOH HOH . 
E 5 HOH A 105 605 103 HOH HOH . 
E 5 HOH A 106 606 64 HOH HOH . 
E 5 HOH A 107 607 24 HOH HOH . 
E 5 HOH A 108 608 9 HOH HOH . 
E 5 HOH A 109 609 84 HOH HOH . 
E 5 HOH A 110 610 30 HOH HOH . 
E 5 HOH A 111 611 34 HOH HOH . 
E 5 HOH A 112 612 125 HOH HOH . 
E 5 HOH A 113 613 79 HOH HOH . 
E 5 HOH A 114 614 12 HOH HOH . 
E 5 HOH A 115 615 107 HOH HOH . 
E 5 HOH A 116 616 115 HOH HOH . 
E 5 HOH A 117 617 28 HOH HOH . 
E 5 HOH A 118 618 114 HOH HOH . 
E 5 HOH A 119 619 119 HOH HOH . 
E 5 HOH A 120 620 94 HOH HOH . 
E 5 HOH A 121 621 29 HOH HOH . 
E 5 HOH A 122 622 59 HOH HOH . 
E 5 HOH A 123 623 154 HOH HOH . 
E 5 HOH A 124 624 66 HOH HOH . 
E 5 HOH A 125 625 123 HOH HOH . 
E 5 HOH A 126 626 14 HOH HOH . 
E 5 HOH A 127 627 99 HOH HOH . 
E 5 HOH A 128 628 63 HOH HOH . 
E 5 HOH A 129 629 52 HOH HOH . 
E 5 HOH A 130 630 110 HOH HOH . 
E 5 HOH A 131 631 146 HOH HOH . 
E 5 HOH A 132 632 130 HOH HOH . 
E 5 HOH A 133 633 65 HOH HOH . 
E 5 HOH A 134 634 72 HOH HOH . 
E 5 HOH A 135 635 32 HOH HOH . 
E 5 HOH A 136 636 104 HOH HOH . 
E 5 HOH A 137 637 138 HOH HOH . 
E 5 HOH A 138 638 149 HOH HOH . 
E 5 HOH A 139 639 157 HOH HOH . 
E 5 HOH A 140 640 44 HOH HOH . 
E 5 HOH A 141 641 120 HOH HOH . 
E 5 HOH A 142 642 75 HOH HOH . 
E 5 HOH A 143 643 152 HOH HOH . 
E 5 HOH A 144 644 159 HOH HOH . 
E 5 HOH A 145 645 108 HOH HOH . 
E 5 HOH A 146 646 145 HOH HOH . 
E 5 HOH A 147 647 82 HOH HOH . 
F 5 HOH D 1 101 38 HOH HOH . 
F 5 HOH D 2 102 18 HOH HOH . 
F 5 HOH D 3 103 117 HOH HOH . 
F 5 HOH D 4 104 93 HOH HOH . 
F 5 HOH D 5 105 20 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 8MW . . . C 3 92.058 86.113 -2.841 1 29.2 ? C4 8MW 401 A 1 
HETATM 2 C C5 8MW . . . C 3 90.654 86.843 -4.44 1 25.65 ? C5 8MW 401 A 1 
HETATM 3 C C6 8MW . . . C 3 88.576 87.585 -5.587 1 24.58 ? C6 8MW 401 A 1 
HETATM 4 N N1 8MW . . . C 3 91.91 86.549 -4.103 1 33.56 ? N1 8MW 401 A 1 
HETATM 5 C C7 8MW . . . C 3 87.603 88.129 -6.62 1 28.28 ? C7 8MW 401 A 1 
HETATM 6 C C8 8MW . . . C 3 93.441 85.772 -2.381 1 39.57 ? C8 8MW 401 A 1 
HETATM 7 C C9 8MW . . . C 3 94.58 86.684 -2.74 1 43.64 ? C9 8MW 401 A 1 
HETATM 8 C C10 8MW . . . C 3 94.471 85.366 -3.396 1 41.46 ? C10 8MW 401 A 1 
HETATM 9 C C11 8MW . . . C 3 88.775 85.989 -1.283 1 29.89 ? C11 8MW 401 A 1 
HETATM 10 O O1 8MW . . . C 3 88.139 88.661 -7.61 1 31.15 -1 O1 8MW 401 A 1 
HETATM 11 O O 8MW . . . C 3 86.365 88.022 -6.414 1 30.68 ? O 8MW 401 A 1 
HETATM 12 C C1 8MW . . . C 3 88.326 87.193 -4.296 1 23.76 ? C1 8MW 401 A 1 
HETATM 13 C C 8MW . . . C 3 86.974 87.3 -3.65 1 31.7 ? C 8MW 401 A 1 
HETATM 14 S S 8MW . . . C 3 90.258 87.445 -6.029 1 31.97 ? S 8MW 401 A 1 
HETATM 15 C C2 8MW . . . C 3 89.523 86.745 -3.621 1 23.77 ? C2 8MW 401 A 1 
HETATM 16 N N 8MW . . . C 3 91.071 85.945 -1.959 1 29.4 ? N 8MW 401 A 1 
HETATM 17 C C3 8MW . . . C 3 89.822 86.242 -2.325 1 31.21 ? C3 8MW 401 A 1 
#
_model_server_stats.io_time_ms              58 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           333 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           17 
#