data_5N4Y # _model_server_result.job_id -VoT_Tmqe611EXmTDXc58g _model_server_result.datetime_utc '2025-09-21 14:23:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5n4y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 5N4Y # _exptl.entry_id 5N4Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 204.248 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,5-dihydro-1~{H}-isothiochromeno[4,3-c]pyrazol-3-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5N4Y _cell.length_a 98.259 _cell.length_b 98.259 _cell.length_c 80.731 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5N4Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H8 N2 O S' _chem_comp.formula_weight 204.248 _chem_comp.id 8N5 _chem_comp.mon_nstd_flag . _chem_comp.name 2,5-dihydro-1~{H}-isothiochromeno[4,3-c]pyrazol-3-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S C6 8N5 sing 1 n n S C7 8N5 sing 2 n n C6 C4 8N5 sing 3 n n O C9 8N5 doub 4 n n C7 C9 8N5 sing 5 n n C7 C8 8N5 doub 6 n n C9 N1 8N5 sing 7 n n C4 C5 8N5 doub 8 n y C4 C3 8N5 sing 9 n y C5 C 8N5 sing 10 n y C8 C3 8N5 sing 11 n n C8 N 8N5 sing 12 n n N1 N 8N5 sing 13 n n C3 C2 8N5 doub 14 n y C C1 8N5 doub 15 n y C2 C1 8N5 sing 16 n y C5 H1 8N5 sing 17 n n C6 H2 8N5 sing 18 n n C6 H3 8N5 sing 19 n n N1 H4 8N5 sing 20 n n C2 H6 8N5 sing 21 n n C1 H7 8N5 sing 22 n n C H8 8N5 sing 23 n n N H5 8N5 sing 24 n n # _atom_sites.entry_id 5N4Y _atom_sites.fract_transf_matrix[1][1] 0.010177 _atom_sites.fract_transf_matrix[1][2] 0.005876 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011752 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012387 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 8N5 A 1 401 1 8N5 XXX . D 4 HOH A 1 501 2 HOH HOH . D 4 HOH A 2 502 22 HOH HOH . D 4 HOH A 3 503 9 HOH HOH . D 4 HOH A 4 504 44 HOH HOH . D 4 HOH A 5 505 13 HOH HOH . D 4 HOH A 6 506 36 HOH HOH . D 4 HOH A 7 507 28 HOH HOH . D 4 HOH A 8 508 24 HOH HOH . D 4 HOH A 9 509 27 HOH HOH . D 4 HOH A 10 510 41 HOH HOH . D 4 HOH A 11 511 40 HOH HOH . D 4 HOH A 12 512 11 HOH HOH . D 4 HOH A 13 513 43 HOH HOH . D 4 HOH A 14 514 8 HOH HOH . D 4 HOH A 15 515 39 HOH HOH . D 4 HOH A 16 516 51 HOH HOH . D 4 HOH A 17 517 14 HOH HOH . D 4 HOH A 18 518 57 HOH HOH . D 4 HOH A 19 519 6 HOH HOH . D 4 HOH A 20 520 38 HOH HOH . D 4 HOH A 21 521 15 HOH HOH . D 4 HOH A 22 522 25 HOH HOH . D 4 HOH A 23 523 21 HOH HOH . D 4 HOH A 24 524 35 HOH HOH . D 4 HOH A 25 525 4 HOH HOH . D 4 HOH A 26 526 3 HOH HOH . D 4 HOH A 27 527 10 HOH HOH . D 4 HOH A 28 528 30 HOH HOH . D 4 HOH A 29 529 20 HOH HOH . D 4 HOH A 30 530 16 HOH HOH . D 4 HOH A 31 531 31 HOH HOH . D 4 HOH A 32 532 7 HOH HOH . D 4 HOH A 33 533 18 HOH HOH . D 4 HOH A 34 534 48 HOH HOH . D 4 HOH A 35 535 12 HOH HOH . D 4 HOH A 36 536 42 HOH HOH . D 4 HOH A 37 537 32 HOH HOH . D 4 HOH A 38 538 19 HOH HOH . D 4 HOH A 39 539 17 HOH HOH . D 4 HOH A 40 540 45 HOH HOH . D 4 HOH A 41 541 53 HOH HOH . D 4 HOH A 42 542 5 HOH HOH . D 4 HOH A 43 543 50 HOH HOH . D 4 HOH A 44 544 26 HOH HOH . D 4 HOH A 45 545 52 HOH HOH . D 4 HOH A 46 546 55 HOH HOH . D 4 HOH A 47 547 23 HOH HOH . D 4 HOH A 48 548 47 HOH HOH . D 4 HOH A 49 549 29 HOH HOH . D 4 HOH A 50 550 46 HOH HOH . D 4 HOH A 51 551 33 HOH HOH . D 4 HOH A 52 552 34 HOH HOH . D 4 HOH A 53 553 54 HOH HOH . D 4 HOH A 54 554 49 HOH HOH . D 4 HOH A 55 555 56 HOH HOH . E 4 HOH B 1 101 37 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 8N5 . . . C 3 92.493 86.671 -5.284 1 39.62 ? C4 8N5 401 A 1 HETATM 2 C C5 8N5 . . . C 3 93.817 86.383 -4.959 1 39.62 ? C5 8N5 401 A 1 HETATM 3 C C6 8N5 . . . C 3 92.139 86.706 -6.745 1 39.62 ? C6 8N5 401 A 1 HETATM 4 N N1 8N5 . . . C 3 88.025 87.557 -4.296 1 39.62 ? N1 8N5 401 A 1 HETATM 5 C C7 8N5 . . . C 3 89.655 87.526 -5.806 1 39.62 ? C7 8N5 401 A 1 HETATM 6 C C8 8N5 . . . C 3 90.192 87.141 -4.594 1 39.62 ? C8 8N5 401 A 1 HETATM 7 C C9 8N5 . . . C 3 88.236 87.794 -5.617 1 39.62 ? C9 8N5 401 A 1 HETATM 8 O O 8N5 . . . C 3 87.346 88.168 -6.393 1 39.62 ? O 8N5 401 A 1 HETATM 9 N N 8N5 . . . C 3 89.203 87.167 -3.676 1 39.62 ? N 8N5 401 A 1 HETATM 10 C C3 8N5 . . . C 3 91.564 86.841 -4.243 1 39.62 ? C3 8N5 401 A 1 HETATM 11 C C2 8N5 . . . C 3 91.979 86.69 -2.921 1 39.62 ? C2 8N5 401 A 1 HETATM 12 C C1 8N5 . . . C 3 93.3 86.406 -2.627 1 39.62 ? C1 8N5 401 A 1 HETATM 13 S S 8N5 . . . C 3 90.679 87.67 -7.21 1 39.62 ? S 8N5 401 A 1 HETATM 14 C C 8N5 . . . C 3 94.217 86.258 -3.64 1 39.62 ? C 8N5 401 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #