data_5N58 # _model_server_result.job_id LWKXISY8yN_wrK2ZjHJ7qA _model_server_result.datetime_utc '2024-11-25 02:27:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5n58 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":501}' # _entry.id 5N58 # _exptl.entry_id 5N58 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5N58 _cell.length_a 54.471 _cell.length_b 81.54 _cell.length_c 95.892 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5N58 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,J 1 1 B,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 114 A HIS 114 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc2 A ND1 HIS 116 A HIS 116 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc3 A OD2 ASP 118 A ASP 118 1_555 G ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc4 A NE2 HIS 179 A HIS 179 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc5 A SG CYS 198 A CYS 198 1_555 G ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc6 A NE2 HIS 240 A HIS 240 1_555 G ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc7 C ZN ZN . A ZN 501 1_555 J O HOH . A HOH 644 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? metalc ? metalc8 B NE2 HIS 114 B HIS 114 1_555 H ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc9 B ND1 HIS 116 B HIS 116 1_555 H ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc10 B NE2 HIS 179 B HIS 179 1_555 H ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5N58 _atom_sites.fract_transf_matrix[1][1] 0.018358 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012264 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010428 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 501 501 ZN ZN . D 3 93W A 1 502 503 93W B73 . E 4 GOL A 1 503 601 GOL GOL . F 4 GOL A 1 504 602 GOL GOL . G 2 ZN A 1 505 1 ZN ZN . H 2 ZN B 1 501 501 ZN ZN . I 3 93W B 1 502 503 93W B73 . J 5 HOH A 1 601 706 HOH HOH . J 5 HOH A 2 602 721 HOH HOH . J 5 HOH A 3 603 808 HOH HOH . J 5 HOH A 4 604 792 HOH HOH . J 5 HOH A 5 605 752 HOH HOH . J 5 HOH A 6 606 716 HOH HOH . J 5 HOH A 7 607 824 HOH HOH . J 5 HOH A 8 608 793 HOH HOH . J 5 HOH A 9 609 719 HOH HOH . J 5 HOH A 10 610 735 HOH HOH . J 5 HOH A 11 611 750 HOH HOH . J 5 HOH A 12 612 802 HOH HOH . J 5 HOH A 13 613 842 HOH HOH . J 5 HOH A 14 614 753 HOH HOH . J 5 HOH A 15 615 736 HOH HOH . J 5 HOH A 16 616 754 HOH HOH . J 5 HOH A 17 617 771 HOH HOH . J 5 HOH A 18 618 760 HOH HOH . J 5 HOH A 19 619 782 HOH HOH . J 5 HOH A 20 620 806 HOH HOH . J 5 HOH A 21 621 761 HOH HOH . J 5 HOH A 22 622 705 HOH HOH . J 5 HOH A 23 623 765 HOH HOH . J 5 HOH A 24 624 749 HOH HOH . J 5 HOH A 25 625 815 HOH HOH . J 5 HOH A 26 626 707 HOH HOH . J 5 HOH A 27 627 2 HOH HOH . J 5 HOH A 28 628 751 HOH HOH . J 5 HOH A 29 629 809 HOH HOH . J 5 HOH A 30 630 741 HOH HOH . J 5 HOH A 31 631 822 HOH HOH . J 5 HOH A 32 632 814 HOH HOH . J 5 HOH A 33 633 704 HOH HOH . J 5 HOH A 34 634 801 HOH HOH . J 5 HOH A 35 635 713 HOH HOH . J 5 HOH A 36 636 725 HOH HOH . J 5 HOH A 37 637 820 HOH HOH . J 5 HOH A 38 638 737 HOH HOH . J 5 HOH A 39 639 734 HOH HOH . J 5 HOH A 40 640 722 HOH HOH . J 5 HOH A 41 641 785 HOH HOH . J 5 HOH A 42 642 775 HOH HOH . J 5 HOH A 43 643 714 HOH HOH . J 5 HOH A 44 644 752 HOH HOH . J 5 HOH A 45 645 745 HOH HOH . J 5 HOH A 46 646 829 HOH HOH . J 5 HOH A 47 647 727 HOH HOH . J 5 HOH A 48 648 743 HOH HOH . J 5 HOH A 49 649 758 HOH HOH . J 5 HOH A 50 650 739 HOH HOH . J 5 HOH A 51 651 825 HOH HOH . J 5 HOH A 52 652 755 HOH HOH . J 5 HOH A 53 653 803 HOH HOH . J 5 HOH A 54 654 760 HOH HOH . J 5 HOH A 55 655 723 HOH HOH . J 5 HOH A 56 656 783 HOH HOH . J 5 HOH A 57 657 775 HOH HOH . J 5 HOH A 58 658 778 HOH HOH . J 5 HOH A 59 659 738 HOH HOH . J 5 HOH A 60 660 800 HOH HOH . J 5 HOH A 61 661 794 HOH HOH . J 5 HOH A 62 662 703 HOH HOH . J 5 HOH A 63 663 804 HOH HOH . J 5 HOH A 64 664 823 HOH HOH . J 5 HOH A 65 665 766 HOH HOH . J 5 HOH A 66 666 817 HOH HOH . J 5 HOH A 67 667 705 HOH HOH . J 5 HOH A 68 668 807 HOH HOH . J 5 HOH A 69 669 723 HOH HOH . J 5 HOH A 70 670 779 HOH HOH . J 5 HOH A 71 671 3 HOH HOH . J 5 HOH A 72 672 772 HOH HOH . J 5 HOH A 73 673 818 HOH HOH . J 5 HOH A 74 674 735 HOH HOH . J 5 HOH A 75 675 740 HOH HOH . J 5 HOH A 76 676 816 HOH HOH . J 5 HOH A 77 677 707 HOH HOH . J 5 HOH A 78 678 802 HOH HOH . J 5 HOH A 79 679 729 HOH HOH . J 5 HOH A 80 680 788 HOH HOH . J 5 HOH A 81 681 748 HOH HOH . J 5 HOH A 82 682 4 HOH HOH . J 5 HOH A 83 683 796 HOH HOH . J 5 HOH A 84 684 840 HOH HOH . J 5 HOH A 85 685 811 HOH HOH . J 5 HOH A 86 686 771 HOH HOH . J 5 HOH A 87 687 803 HOH HOH . J 5 HOH A 88 688 825 HOH HOH . J 5 HOH A 89 689 740 HOH HOH . J 5 HOH A 90 690 781 HOH HOH . J 5 HOH A 91 691 763 HOH HOH . J 5 HOH A 92 692 714 HOH HOH . J 5 HOH A 93 693 811 HOH HOH . J 5 HOH A 94 694 836 HOH HOH . J 5 HOH A 95 695 799 HOH HOH . J 5 HOH A 96 696 759 HOH HOH . J 5 HOH A 97 697 838 HOH HOH . J 5 HOH A 98 698 833 HOH HOH . J 5 HOH A 99 699 787 HOH HOH . J 5 HOH A 100 700 786 HOH HOH . J 5 HOH A 101 701 819 HOH HOH . J 5 HOH A 102 702 726 HOH HOH . J 5 HOH A 103 703 757 HOH HOH . J 5 HOH A 104 704 780 HOH HOH . J 5 HOH A 105 705 832 HOH HOH . J 5 HOH A 106 706 835 HOH HOH . J 5 HOH A 107 707 758 HOH HOH . J 5 HOH A 108 708 826 HOH HOH . J 5 HOH A 109 709 787 HOH HOH . J 5 HOH A 110 710 817 HOH HOH . J 5 HOH A 111 711 783 HOH HOH . J 5 HOH A 112 712 801 HOH HOH . J 5 HOH A 113 713 841 HOH HOH . J 5 HOH A 114 714 824 HOH HOH . J 5 HOH A 115 715 821 HOH HOH . J 5 HOH A 116 716 715 HOH HOH . J 5 HOH A 117 717 785 HOH HOH . J 5 HOH A 118 718 747 HOH HOH . J 5 HOH A 119 719 795 HOH HOH . J 5 HOH A 120 720 770 HOH HOH . J 5 HOH A 121 721 773 HOH HOH . J 5 HOH A 122 722 818 HOH HOH . J 5 HOH A 123 723 773 HOH HOH . J 5 HOH A 124 724 800 HOH HOH . J 5 HOH A 125 725 837 HOH HOH . J 5 HOH A 126 726 794 HOH HOH . K 5 HOH B 1 601 736 HOH HOH . K 5 HOH B 2 602 702 HOH HOH . K 5 HOH B 3 603 763 HOH HOH . K 5 HOH B 4 604 718 HOH HOH . K 5 HOH B 5 605 805 HOH HOH . K 5 HOH B 6 606 715 HOH HOH . K 5 HOH B 7 607 770 HOH HOH . K 5 HOH B 8 608 759 HOH HOH . K 5 HOH B 9 609 828 HOH HOH . K 5 HOH B 10 610 768 HOH HOH . K 5 HOH B 11 611 821 HOH HOH . K 5 HOH B 12 612 749 HOH HOH . K 5 HOH B 13 613 703 HOH HOH . K 5 HOH B 14 614 709 HOH HOH . K 5 HOH B 15 615 721 HOH HOH . K 5 HOH B 16 616 717 HOH HOH . K 5 HOH B 17 617 810 HOH HOH . K 5 HOH B 18 618 746 HOH HOH . K 5 HOH B 19 619 708 HOH HOH . K 5 HOH B 20 620 704 HOH HOH . K 5 HOH B 21 621 701 HOH HOH . K 5 HOH B 22 622 720 HOH HOH . K 5 HOH B 23 623 711 HOH HOH . K 5 HOH B 24 624 757 HOH HOH . K 5 HOH B 25 625 718 HOH HOH . K 5 HOH B 26 626 778 HOH HOH . K 5 HOH B 27 627 728 HOH HOH . K 5 HOH B 28 628 786 HOH HOH . K 5 HOH B 29 629 765 HOH HOH . K 5 HOH B 30 630 744 HOH HOH . K 5 HOH B 31 631 777 HOH HOH . K 5 HOH B 32 632 727 HOH HOH . K 5 HOH B 33 633 779 HOH HOH . K 5 HOH B 34 634 756 HOH HOH . K 5 HOH B 35 635 831 HOH HOH . K 5 HOH B 36 636 776 HOH HOH . K 5 HOH B 37 637 730 HOH HOH . K 5 HOH B 38 638 737 HOH HOH . K 5 HOH B 39 639 807 HOH HOH . K 5 HOH B 40 640 745 HOH HOH . K 5 HOH B 41 641 769 HOH HOH . K 5 HOH B 42 642 798 HOH HOH . K 5 HOH B 43 643 725 HOH HOH . K 5 HOH B 44 644 816 HOH HOH . K 5 HOH B 45 645 812 HOH HOH . K 5 HOH B 46 646 756 HOH HOH . K 5 HOH B 47 647 833 HOH HOH . K 5 HOH B 48 648 754 HOH HOH . K 5 HOH B 49 649 830 HOH HOH . K 5 HOH B 50 650 764 HOH HOH . K 5 HOH B 51 651 826 HOH HOH . K 5 HOH B 52 652 777 HOH HOH . K 5 HOH B 53 653 827 HOH HOH . K 5 HOH B 54 654 831 HOH HOH . K 5 HOH B 55 655 731 HOH HOH . K 5 HOH B 56 656 720 HOH HOH . K 5 HOH B 57 657 776 HOH HOH . K 5 HOH B 58 658 701 HOH HOH . K 5 HOH B 59 659 784 HOH HOH . K 5 HOH B 60 660 717 HOH HOH . K 5 HOH B 61 661 799 HOH HOH . K 5 HOH B 62 662 815 HOH HOH . K 5 HOH B 63 663 713 HOH HOH . K 5 HOH B 64 664 781 HOH HOH . K 5 HOH B 65 665 798 HOH HOH . K 5 HOH B 66 666 834 HOH HOH . K 5 HOH B 67 667 809 HOH HOH . K 5 HOH B 68 668 830 HOH HOH . K 5 HOH B 69 669 755 HOH HOH . K 5 HOH B 70 670 748 HOH HOH . K 5 HOH B 71 671 769 HOH HOH . K 5 HOH B 72 672 832 HOH HOH . K 5 HOH B 73 673 805 HOH HOH . K 5 HOH B 74 674 812 HOH HOH . K 5 HOH B 75 675 782 HOH HOH . K 5 HOH B 76 676 789 HOH HOH . K 5 HOH B 77 677 791 HOH HOH . K 5 HOH B 78 678 839 HOH HOH . K 5 HOH B 79 679 730 HOH HOH . K 5 HOH B 80 680 814 HOH HOH . K 5 HOH B 81 681 813 HOH HOH . K 5 HOH B 82 682 797 HOH HOH . K 5 HOH B 83 683 742 HOH HOH . K 5 HOH B 84 684 808 HOH HOH . K 5 HOH B 85 685 834 HOH HOH . K 5 HOH B 86 686 796 HOH HOH . K 5 HOH B 87 687 792 HOH HOH . K 5 HOH B 88 688 790 HOH HOH . K 5 HOH B 89 689 804 HOH HOH . K 5 HOH B 90 690 793 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 2 _atom_site.Cartn_x 27.871 _atom_site.Cartn_y -21.264 _atom_site.Cartn_z -42.958 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 37.19 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 501 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #