data_5N7G
#
_model_server_result.job_id            6EehdcXnzMcwVtmalzqezA 
_model_server_result.datetime_utc      '2024-10-18 15:22:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5n7g 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":907}' 
#
_entry.id    5N7G 
#
_exptl.entry_id    5N7G 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          98.69 
_cell.angle_gamma         90 
_cell.entry_id            5N7G 
_cell.length_a            194.93 
_cell.length_b            60.23 
_cell.length_c            99.35 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5N7G 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,L 1 1 
B,M,N,O,P,Q 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 K N N 
? 4 L N N 
? 4 O N N 
? 4 P N N 
? 4 Q N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 C C PRO 3 C PRO 731 1_555 C N SEP 4 C SEP 732 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? 
covale ? covale2 C C SEP 4 C SEP 732 1_555 C N THR 5 C THR 733 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
metalc ? metalc1 A OD1 ASP 73 A ASP 524 1_555 K CA CA . A CA 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.858 ? 
metalc ? metalc2 A O GLY 138 A GLY 589 1_555 G CA CA . A CA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.915 ? 
metalc ? metalc3 A O VAL 139 A VAL 590 1_555 G CA CA . A CA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? 
metalc ? metalc4 A OE1 GLU 141 A GLU 592 1_555 G CA CA . A CA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.95 ? 
metalc ? metalc5 A O GLY 290 A GLY 741 1_555 H CA CA . A CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.752 ? 
metalc ? metalc6 A O ARG 293 A ARG 744 1_555 H CA CA . A CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? 
metalc ? metalc7 A O GLY 295 A GLY 746 1_555 H CA CA . A CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? 
metalc ? metalc8 A OG SER 322 A SER 773 1_555 I CA CA . A CA 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.474 ? 
metalc ? metalc9 A OG SER 322 A SER 773 1_555 L CA CA . A CA 909 4_9414 ? ? ? ? ? ? ? ? ? ? ? ? 40.901 ? 
metalc ? metalc10 A OE1 GLU 335 A GLU 786 1_555 H CA CA . A CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.477 ? 
metalc ? metalc11 A OE2 GLU 335 A GLU 786 1_555 H CA CA . A CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.673 ? 
metalc ? metalc12 A O MET 366 A MET 817 1_555 L CA CA . A CA 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? 
metalc ? metalc13 A O GLY 368 A GLY 819 1_555 I CA CA . A CA 906 4_9514 ? ? ? ? ? ? ? ? ? ? ? ? 40.492 ? 
metalc ? metalc14 A O GLY 368 A GLY 819 1_555 L CA CA . A CA 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.773 ? 
metalc ? metalc15 A O GLY 370 A GLY 821 1_555 I CA CA . A CA 906 4_9514 ? ? ? ? ? ? ? ? ? ? ? ? 41.925 ? 
metalc ? metalc16 A O GLY 370 A GLY 821 1_555 L CA CA . A CA 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? 
metalc ? metalc17 A OD1 ASP 410 A ASP 861 1_555 I CA CA . A CA 906 4_9514 ? ? ? ? ? ? ? ? ? ? ? ? 41.844 ? 
metalc ? metalc18 A OD1 ASP 410 A ASP 861 1_555 L CA CA . A CA 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? 
metalc ? metalc19 A OD2 ASP 410 A ASP 861 1_555 L CA CA . A CA 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.587 ? 
metalc ? metalc20 B O VAL 139 B VAL 590 1_555 P CA CA . B CA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.097 ? 
metalc ? metalc21 B OG SER 322 B SER 773 1_555 Q CA CA . B CA 905 4_9513 ? ? ? ? ? ? ? ? ? ? ? ? 41.353 ? 
metalc ? metalc22 B OE2 GLU 335 B GLU 786 1_555 O CA CA . B CA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.797 ? 
metalc ? metalc23 B O MET 366 B MET 817 1_555 Q CA CA . B CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.807 ? 
metalc ? metalc24 B O GLY 368 B GLY 819 1_555 Q CA CA . B CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? 
metalc ? metalc25 B O GLY 370 B GLY 821 1_555 Q CA CA . B CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? 
metalc ? metalc26 B OD1 ASP 410 B ASP 861 1_555 Q CA CA . B CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? 
metalc ? metalc27 B OD2 ASP 410 B ASP 861 1_555 Q CA CA . B CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5N7G 
_atom_sites.fract_transf_matrix[1][1]    0.00513 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000784 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016603 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010182 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 GOL A 1 901 1 GOL GOL . 
E 3 GOL A 1 902 2 GOL GOL . 
F 3 GOL A 1 903 5 GOL GOL . 
G 4 CA A 1 904 1 CA CA . 
H 4 CA A 1 905 2 CA CA . 
I 4 CA A 1 906 3 CA CA . 
J 4 CA A 1 907 10 CA CA . 
K 4 CA A 1 908 11 CA CA . 
L 4 CA A 1 909 12 CA CA . 
M 3 GOL B 1 901 3 GOL GOL . 
N 3 GOL B 1 902 4 GOL GOL . 
O 4 CA B 1 903 4 CA CA . 
P 4 CA B 1 904 6 CA CA . 
Q 4 CA B 1 905 8 CA CA . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         J 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               359.721 
_atom_site.Cartn_y               -6.732 
_atom_site.Cartn_z               440.036 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        49.61 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           907 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#