data_5N7V
#
_model_server_result.job_id            55r5033c34NHlqkiKWS_UQ 
_model_server_result.datetime_utc      '2025-01-10 20:03:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5n7v 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":901}' 
#
_entry.id    5N7V 
#
_exptl.entry_id    5N7V 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              407.512 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ~{N}6-cyclohexyl-~{N}2-(2-methyl-4-morpholin-4-yl-phenyl)-7~{H}-purine-2,6-diamine 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5N7V 
_cell.length_a            71.03 
_cell.length_b            112.01 
_cell.length_c            114.043 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5N7V 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C GLY 190 A GLY 685 1_555 A N TPO 191 A TPO 686 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale2 A C TPO 191 A TPO 686 1_555 A N VAL 192 A VAL 687 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
#
_chem_comp.formula           'C22 H29 N7 O' 
_chem_comp.formula_weight    407.512 
_chem_comp.id                8PT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              ~{N}6-cyclohexyl-~{N}2-(2-methyl-4-morpholin-4-yl-phenyl)-7~{H}-purine-2,6-diamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N9 C8 8PT doub 51 n y 
N9 C4 8PT sing 52 n y 
C8 N7 8PT sing 53 n y 
C4 N3 8PT doub 54 n y 
C4 C5 8PT sing 55 n y 
N3 C2 8PT sing 56 n y 
N7 C5 8PT sing 57 n y 
C5 C6 8PT doub 58 n y 
C2 N2 8PT sing 59 n n 
C2 N1 8PT doub 60 n y 
N2 CAM 8PT sing 61 n n 
C6 N1 8PT sing 62 n y 
C6 N6 8PT sing 63 n n 
CAS CAR 8PT sing 64 n n 
CAM CAR 8PT doub 65 n y 
CAM CAN 8PT sing 66 n y 
N6 CAK 8PT sing 67 n n 
CAK CAY 8PT sing 68 n n 
CAK CAU 8PT sing 69 n n 
CAR CAQ 8PT sing 70 n y 
CAN CAO 8PT doub 71 n y 
CAY CAX 8PT sing 72 n n 
CAU CAV 8PT sing 73 n n 
CAQ CAP 8PT doub 74 n y 
CAX CAW 8PT sing 75 n n 
CAO CAP 8PT sing 76 n y 
CAP NAT 8PT sing 77 n n 
CAV CAW 8PT sing 78 n n 
NAT CAZ 8PT sing 79 n n 
NAT CBD 8PT sing 80 n n 
CAZ CBA 8PT sing 81 n n 
CBD CBC 8PT sing 82 n n 
CBA OBB 8PT sing 83 n n 
CBC OBB 8PT sing 84 n n 
C8 H1 8PT sing 85 n n 
CAU H2 8PT sing 86 n n 
CAV H3 8PT sing 87 n n 
CAW H4 8PT sing 88 n n 
CAW H5 8PT sing 89 n n 
CAX H6 8PT sing 90 n n 
CAX H7 8PT sing 91 n n 
CAY H8 8PT sing 92 n n 
CAY H9 8PT sing 93 n n 
CAK H10 8PT sing 94 n n 
N6 H11 8PT sing 95 n n 
N7 H12 8PT sing 96 n n 
N2 H14 8PT sing 97 n n 
CAS H15 8PT sing 98 n n 
CAS H16 8PT sing 99 n n 
CAS H17 8PT sing 100 n n 
CAQ H18 8PT sing 101 n n 
CAN H19 8PT sing 102 n n 
CAO H20 8PT sing 103 n n 
CAZ H21 8PT sing 104 n n 
CAZ H22 8PT sing 105 n n 
CBA H23 8PT sing 106 n n 
CBA H24 8PT sing 107 n n 
CBC H25 8PT sing 108 n n 
CBC H26 8PT sing 109 n n 
CBD H27 8PT sing 110 n n 
CBD H28 8PT sing 111 n n 
CAU H13 8PT sing 112 n n 
CAV H29 8PT sing 113 n n 
#
_atom_sites.entry_id                     5N7V 
_atom_sites.fract_transf_matrix[1][1]    0.014079 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008928 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008769 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 8PT A 1 901 795 8PT N35 . 
C 3 7PE A 1 902 796 7PE 7PE . 
D 3 7PE A 1 903 797 7PE 7PE . 
E 4 HOH A 1 1001 95 HOH HOH . 
E 4 HOH A 2 1002 24 HOH HOH . 
E 4 HOH A 3 1003 87 HOH HOH . 
E 4 HOH A 4 1004 18 HOH HOH . 
E 4 HOH A 5 1005 70 HOH HOH . 
E 4 HOH A 6 1006 154 HOH HOH . 
E 4 HOH A 7 1007 112 HOH HOH . 
E 4 HOH A 8 1008 88 HOH HOH . 
E 4 HOH A 9 1009 147 HOH HOH . 
E 4 HOH A 10 1010 93 HOH HOH . 
E 4 HOH A 11 1011 144 HOH HOH . 
E 4 HOH A 12 1012 74 HOH HOH . 
E 4 HOH A 13 1013 27 HOH HOH . 
E 4 HOH A 14 1014 5 HOH HOH . 
E 4 HOH A 15 1015 124 HOH HOH . 
E 4 HOH A 16 1016 138 HOH HOH . 
E 4 HOH A 17 1017 13 HOH HOH . 
E 4 HOH A 18 1018 94 HOH HOH . 
E 4 HOH A 19 1019 149 HOH HOH . 
E 4 HOH A 20 1020 32 HOH HOH . 
E 4 HOH A 21 1021 153 HOH HOH . 
E 4 HOH A 22 1022 53 HOH HOH . 
E 4 HOH A 23 1023 109 HOH HOH . 
E 4 HOH A 24 1024 125 HOH HOH . 
E 4 HOH A 25 1025 37 HOH HOH . 
E 4 HOH A 26 1026 59 HOH HOH . 
E 4 HOH A 27 1027 38 HOH HOH . 
E 4 HOH A 28 1028 28 HOH HOH . 
E 4 HOH A 29 1029 97 HOH HOH . 
E 4 HOH A 30 1030 9 HOH HOH . 
E 4 HOH A 31 1031 113 HOH HOH . 
E 4 HOH A 32 1032 106 HOH HOH . 
E 4 HOH A 33 1033 117 HOH HOH . 
E 4 HOH A 34 1034 52 HOH HOH . 
E 4 HOH A 35 1035 121 HOH HOH . 
E 4 HOH A 36 1036 110 HOH HOH . 
E 4 HOH A 37 1037 135 HOH HOH . 
E 4 HOH A 38 1038 127 HOH HOH . 
E 4 HOH A 39 1039 91 HOH HOH . 
E 4 HOH A 40 1040 152 HOH HOH . 
E 4 HOH A 41 1041 3 HOH HOH . 
E 4 HOH A 42 1042 8 HOH HOH . 
E 4 HOH A 43 1043 6 HOH HOH . 
E 4 HOH A 44 1044 104 HOH HOH . 
E 4 HOH A 45 1045 69 HOH HOH . 
E 4 HOH A 46 1046 98 HOH HOH . 
E 4 HOH A 47 1047 39 HOH HOH . 
E 4 HOH A 48 1048 151 HOH HOH . 
E 4 HOH A 49 1049 137 HOH HOH . 
E 4 HOH A 50 1050 90 HOH HOH . 
E 4 HOH A 51 1051 60 HOH HOH . 
E 4 HOH A 52 1052 111 HOH HOH . 
E 4 HOH A 53 1053 16 HOH HOH . 
E 4 HOH A 54 1054 61 HOH HOH . 
E 4 HOH A 55 1055 134 HOH HOH . 
E 4 HOH A 56 1056 131 HOH HOH . 
E 4 HOH A 57 1057 129 HOH HOH . 
E 4 HOH A 58 1058 81 HOH HOH . 
E 4 HOH A 59 1059 105 HOH HOH . 
E 4 HOH A 60 1060 15 HOH HOH . 
E 4 HOH A 61 1061 132 HOH HOH . 
E 4 HOH A 62 1062 57 HOH HOH . 
E 4 HOH A 63 1063 96 HOH HOH . 
E 4 HOH A 64 1064 64 HOH HOH . 
E 4 HOH A 65 1065 29 HOH HOH . 
E 4 HOH A 66 1066 116 HOH HOH . 
E 4 HOH A 67 1067 142 HOH HOH . 
E 4 HOH A 68 1068 114 HOH HOH . 
E 4 HOH A 69 1069 46 HOH HOH . 
E 4 HOH A 70 1070 77 HOH HOH . 
E 4 HOH A 71 1071 67 HOH HOH . 
E 4 HOH A 72 1072 22 HOH HOH . 
E 4 HOH A 73 1073 118 HOH HOH . 
E 4 HOH A 74 1074 34 HOH HOH . 
E 4 HOH A 75 1075 89 HOH HOH . 
E 4 HOH A 76 1076 26 HOH HOH . 
E 4 HOH A 77 1077 65 HOH HOH . 
E 4 HOH A 78 1078 100 HOH HOH . 
E 4 HOH A 79 1079 42 HOH HOH . 
E 4 HOH A 80 1080 126 HOH HOH . 
E 4 HOH A 81 1081 107 HOH HOH . 
E 4 HOH A 82 1082 139 HOH HOH . 
E 4 HOH A 83 1083 115 HOH HOH . 
E 4 HOH A 84 1084 86 HOH HOH . 
E 4 HOH A 85 1085 140 HOH HOH . 
E 4 HOH A 86 1086 130 HOH HOH . 
E 4 HOH A 87 1087 120 HOH HOH . 
E 4 HOH A 88 1088 143 HOH HOH . 
E 4 HOH A 89 1089 85 HOH HOH . 
E 4 HOH A 90 1090 30 HOH HOH . 
E 4 HOH A 91 1091 83 HOH HOH . 
E 4 HOH A 92 1092 79 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 8PT . . . B 2 36.203 43.224 37.906 1 67.16 ? C4 8PT 901 A 1 
HETATM 2 C C5 8PT . . . B 2 36.627 42.389 38.906 1 65.55 ? C5 8PT 901 A 1 
HETATM 3 C C6 8PT . . . B 2 36.281 42.683 40.179 1 71.83 ? C6 8PT 901 A 1 
HETATM 4 C C8 8PT . . . B 2 37.343 41.67 36.996 1 68.58 ? C8 8PT 901 A 1 
HETATM 5 C C2 8PT . . . B 2 35.108 44.534 39.48 1 71.04 ? C2 8PT 901 A 1 
HETATM 6 C CAU 8PT . . . B 2 38.423 41.477 42.735 1 77.04 ? CAU 8PT 901 A 1 
HETATM 7 C CAV 8PT . . . B 2 38.029 41.373 44.221 1 70.55 ? CAV 8PT 901 A 1 
HETATM 8 C CAW 8PT . . . B 2 36.806 40.466 44.545 1 73.46 ? CAW 8PT 901 A 1 
HETATM 9 C CAX 8PT . . . B 2 35.802 40.321 43.393 1 72.53 ? CAX 8PT 901 A 1 
HETATM 10 C CAY 8PT . . . B 2 36.62 39.824 42.262 1 84.3 ? CAY 8PT 901 A 1 
HETATM 11 C CAK 8PT . . . B 2 37.41 40.979 41.656 1 71.27 ? CAK 8PT 901 A 1 
HETATM 12 N N6 8PT . . . B 2 36.538 42.046 41.331 1 61.3 ? N6 8PT 901 A 1 
HETATM 13 N N1 8PT . . . B 2 35.54 43.736 40.425 1 65.59 ? N1 8PT 901 A 1 
HETATM 14 N N7 8PT . . . B 2 37.331 41.432 38.337 1 67.64 ? N7 8PT 901 A 1 
HETATM 15 N N9 8PT . . . B 2 36.639 42.767 36.722 1 64.59 ? N9 8PT 901 A 1 
HETATM 16 N N3 8PT . . . B 2 35.436 44.303 38.185 1 61.26 ? N3 8PT 901 A 1 
HETATM 17 N N2 8PT . . . B 2 34.374 45.538 39.956 1 76.23 ? N2 8PT 901 A 1 
HETATM 18 C CAM 8PT . . . B 2 34.192 45.619 41.317 1 75.14 ? CAM 8PT 901 A 1 
HETATM 19 C CAR 8PT . . . B 2 34.264 46.898 41.898 1 71.93 ? CAR 8PT 901 A 1 
HETATM 20 C CAS 8PT . . . B 2 34.526 48.039 41.156 1 72.64 ? CAS 8PT 901 A 1 
HETATM 21 C CAQ 8PT . . . B 2 34.079 47.039 43.258 1 67.31 ? CAQ 8PT 901 A 1 
HETATM 22 C CAN 8PT . . . B 2 33.939 44.503 42.139 1 68.9 ? CAN 8PT 901 A 1 
HETATM 23 C CAO 8PT . . . B 2 33.748 44.665 43.502 1 73.19 ? CAO 8PT 901 A 1 
HETATM 24 C CAP 8PT . . . B 2 33.82 45.944 44.063 1 75.21 ? CAP 8PT 901 A 1 
HETATM 25 N NAT 8PT . . . B 2 33.629 46.149 45.374 1 82.65 ? NAT 8PT 901 A 1 
HETATM 26 C CAZ 8PT . . . B 2 32.637 47.16 45.784 1 93.09 ? CAZ 8PT 901 A 1 
HETATM 27 C CBA 8PT . . . B 2 32.684 47.203 47.309 1 93.53 ? CBA 8PT 901 A 1 
HETATM 28 O OBB 8PT . . . B 2 32.451 45.865 47.809 1 90.51 ? OBB 8PT 901 A 1 
HETATM 29 C CBC 8PT . . . B 2 33.563 44.993 47.619 1 88.9 ? CBC 8PT 901 A 1 
HETATM 30 C CBD 8PT . . . B 2 34.396 45.391 46.392 1 91.41 ? CBD 8PT 901 A 1 
#
_model_server_stats.io_time_ms              59 
_model_server_stats.parse_time_ms           35 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           322 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           30 
#