data_5N95 # _model_server_result.job_id -KQ8qwGubXrPoFyWQTjKzA _model_server_result.datetime_utc '2025-07-03 14:27:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5n95 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 5N95 # _exptl.entry_id 5N95 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 257.955 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRIPHOSPHATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5N95 _cell.length_a 92.537 _cell.length_b 92.537 _cell.length_c 120.441 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5N95 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'H5 O10 P3' _chem_comp.formula_weight 257.955 _chem_comp.id 3PO _chem_comp.mon_nstd_flag . _chem_comp.name TRIPHOSPHATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G 3PO doub 1 n n PG O2G 3PO sing 2 n n PG O3G 3PO sing 3 n n PG O3B 3PO sing 4 n n O2G HOG2 3PO sing 5 n n O3G HOG3 3PO sing 6 n n PB O1B 3PO doub 7 n n PB O2B 3PO sing 8 n n PB O3B 3PO sing 9 n n PB O3A 3PO sing 10 n n O2B HOB2 3PO sing 11 n n PA O1A 3PO doub 12 n n PA O2A 3PO sing 13 n n PA O3A 3PO sing 14 n n PA O5' 3PO sing 15 n n O2A HOA2 3PO sing 16 n n O5' HO5' 3PO sing 17 n n # _atom_sites.entry_id 5N95 _atom_sites.fract_transf_matrix[1][1] 0.010806 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010806 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008303 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 3PO A 1 501 1 3PO 3PO . C 3 HOH A 1 601 88 HOH HOH . C 3 HOH A 2 602 33 HOH HOH . C 3 HOH A 3 603 26 HOH HOH . C 3 HOH A 4 604 83 HOH HOH . C 3 HOH A 5 605 81 HOH HOH . C 3 HOH A 6 606 1 HOH HOH . C 3 HOH A 7 607 37 HOH HOH . C 3 HOH A 8 608 19 HOH HOH . C 3 HOH A 9 609 67 HOH HOH . C 3 HOH A 10 610 87 HOH HOH . C 3 HOH A 11 611 2 HOH HOH . C 3 HOH A 12 612 39 HOH HOH . C 3 HOH A 13 613 84 HOH HOH . C 3 HOH A 14 614 38 HOH HOH . C 3 HOH A 15 615 65 HOH HOH . C 3 HOH A 16 616 85 HOH HOH . C 3 HOH A 17 617 10 HOH HOH . C 3 HOH A 18 618 5 HOH HOH . C 3 HOH A 19 619 40 HOH HOH . C 3 HOH A 20 620 16 HOH HOH . C 3 HOH A 21 621 24 HOH HOH . C 3 HOH A 22 622 66 HOH HOH . C 3 HOH A 23 623 68 HOH HOH . C 3 HOH A 24 624 34 HOH HOH . C 3 HOH A 25 625 3 HOH HOH . C 3 HOH A 26 626 9 HOH HOH . C 3 HOH A 27 627 74 HOH HOH . C 3 HOH A 28 628 32 HOH HOH . C 3 HOH A 29 629 14 HOH HOH . C 3 HOH A 30 630 20 HOH HOH . C 3 HOH A 31 631 75 HOH HOH . C 3 HOH A 32 632 8 HOH HOH . C 3 HOH A 33 633 78 HOH HOH . C 3 HOH A 34 634 80 HOH HOH . C 3 HOH A 35 635 27 HOH HOH . C 3 HOH A 36 636 71 HOH HOH . C 3 HOH A 37 637 57 HOH HOH . C 3 HOH A 38 638 12 HOH HOH . C 3 HOH A 39 639 72 HOH HOH . C 3 HOH A 40 640 15 HOH HOH . C 3 HOH A 41 641 50 HOH HOH . C 3 HOH A 42 642 30 HOH HOH . C 3 HOH A 43 643 79 HOH HOH . C 3 HOH A 44 644 73 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG 3PO . . . B 2 18.743 18.168 21.425 1 111.73 ? PG 3PO 501 A 1 HETATM 2 O O1G 3PO . . . B 2 20.079 18.345 20.745 1 111.48 ? O1G 3PO 501 A 1 HETATM 3 O O2G 3PO . . . B 2 18.043 19.504 21.513 1 112.04 ? O2G 3PO 501 A 1 HETATM 4 O O3G 3PO . . . B 2 18.948 17.625 22.819 1 111.4 ? O3G 3PO 501 A 1 HETATM 5 P PB 3PO . . . B 2 18.181 15.543 20.286 1 113.39 ? PB 3PO 501 A 1 HETATM 6 O O1B 3PO . . . B 2 19.268 15.447 19.243 1 113.25 ? O1B 3PO 501 A 1 HETATM 7 O O2B 3PO . . . B 2 16.951 14.821 19.789 1 112.74 ? O2B 3PO 501 A 1 HETATM 8 O O3B 3PO . . . B 2 17.809 17.127 20.551 1 112.53 ? O3B 3PO 501 A 1 HETATM 9 P PA 3PO . . . B 2 20.263 14.523 22.067 1 114.56 ? PA 3PO 501 A 1 HETATM 10 O O1A 3PO . . . B 2 20.769 13.413 21.177 1 114.29 ? O1A 3PO 501 A 1 HETATM 11 O O2A 3PO . . . B 2 20.359 14.094 23.512 1 114.21 ? O2A 3PO 501 A 1 HETATM 12 O O3A 3PO . . . B 2 18.689 14.85 21.694 1 114.05 ? O3A 3PO 501 A 1 HETATM 13 O O5' 3PO . . . B 2 21.107 15.757 21.859 1 114.15 ? O5' 3PO 501 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 237 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 13 #