data_5N9N # _model_server_result.job_id LuDBMqMfPECjAVu8jyXHKg _model_server_result.datetime_utc '2024-10-15 11:23:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5n9n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5N9N # _exptl.entry_id 5N9N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 404.243 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4~{Z})-7,9-bis(chloranyl)-4-[[(4-methoxyphenyl)amino]methylidene]-8-oxidanyl-1,2-dihydrodibenzofuran-3-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.97 _cell.angle_gamma 90 _cell.entry_id 5N9N _cell.length_a 57.477 _cell.length_b 45.505 _cell.length_c 63.489 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5N9N _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H15 Cl2 N O4' _chem_comp.formula_weight 404.243 _chem_comp.id KC5 _chem_comp.mon_nstd_flag . _chem_comp.name (4~{Z})-7,9-bis(chloranyl)-4-[[(4-methoxyphenyl)amino]methylidene]-8-oxidanyl-1,2-dihydrodibenzofuran-3-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL1 CAR KC5 sing 192 n n CAA OAO KC5 sing 193 n n CAR CAM KC5 doub 194 n y CAR CAT KC5 sing 195 n y CAM CAX KC5 sing 196 n y OAC CAT KC5 sing 197 n n CAT CAV KC5 doub 198 n y CAJ CAH KC5 doub 199 n y CAJ CAU KC5 sing 200 n y CAX OAP KC5 sing 201 n y CAX CBA KC5 doub 202 n y OAO CAU KC5 sing 203 n n OAP CAZ KC5 sing 204 n y CAH CAS KC5 sing 205 n y CAU CAK KC5 doub 206 n y CAV CBA KC5 sing 207 n y CAV CL2 KC5 sing 208 n n CBA CAY KC5 sing 209 n y CAZ CAY KC5 doub 210 n y CAZ CAW KC5 sing 211 n n CAF CAW KC5 doub 212 z n CAF NAN KC5 sing 213 n n CAS NAN KC5 sing 214 n n CAS CAI KC5 doub 215 n y CAK CAI KC5 sing 216 n y CAY CAL KC5 sing 217 n n CAW CAQ KC5 sing 218 n n CAL CAG KC5 sing 219 n n CAQ CAG KC5 sing 220 n n CAQ OAB KC5 doub 221 n n CAA H1 KC5 sing 222 n n CAA H2 KC5 sing 223 n n CAA H3 KC5 sing 224 n n CAF H4 KC5 sing 225 n n CAG H5 KC5 sing 226 n n CAG H6 KC5 sing 227 n n CAH H7 KC5 sing 228 n n CAI H8 KC5 sing 229 n n CAJ H9 KC5 sing 230 n n CAK H10 KC5 sing 231 n n CAL H11 KC5 sing 232 n n CAL H12 KC5 sing 233 n n CAM H13 KC5 sing 234 n n OAC H15 KC5 sing 235 n n NAN H14 KC5 sing 236 n n # _atom_sites.entry_id 5N9N _atom_sites.fract_transf_matrix[1][1] 0.017398 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00667 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021976 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016868 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 KC5 A 1 401 1 KC5 DRG . C 3 ACT A 1 402 2 ACT ACT . D 3 ACT A 1 403 3 ACT ACT . E 3 ACT A 1 404 4 ACT ACT . F 3 ACT A 1 405 5 ACT ACT . G 3 ACT A 1 406 6 ACT ACT . H 4 GOL A 1 407 7 GOL GOL . I 4 GOL A 1 408 8 GOL GOL . J 4 GOL A 1 409 9 GOL GOL . K 4 GOL A 1 410 10 GOL GOL . L 4 GOL A 1 411 11 GOL GOL . M 5 HOH A 1 501 157 HOH HOH . M 5 HOH A 2 502 141 HOH HOH . M 5 HOH A 3 503 87 HOH HOH . M 5 HOH A 4 504 112 HOH HOH . M 5 HOH A 5 505 170 HOH HOH . M 5 HOH A 6 506 35 HOH HOH . M 5 HOH A 7 507 147 HOH HOH . M 5 HOH A 8 508 33 HOH HOH . M 5 HOH A 9 509 83 HOH HOH . M 5 HOH A 10 510 43 HOH HOH . M 5 HOH A 11 511 62 HOH HOH . M 5 HOH A 12 512 47 HOH HOH . M 5 HOH A 13 513 81 HOH HOH . M 5 HOH A 14 514 99 HOH HOH . M 5 HOH A 15 515 85 HOH HOH . M 5 HOH A 16 516 41 HOH HOH . M 5 HOH A 17 517 49 HOH HOH . M 5 HOH A 18 518 105 HOH HOH . M 5 HOH A 19 519 82 HOH HOH . M 5 HOH A 20 520 142 HOH HOH . M 5 HOH A 21 521 163 HOH HOH . M 5 HOH A 22 522 89 HOH HOH . M 5 HOH A 23 523 104 HOH HOH . M 5 HOH A 24 524 75 HOH HOH . M 5 HOH A 25 525 74 HOH HOH . M 5 HOH A 26 526 39 HOH HOH . M 5 HOH A 27 527 90 HOH HOH . M 5 HOH A 28 528 159 HOH HOH . M 5 HOH A 29 529 44 HOH HOH . M 5 HOH A 30 530 31 HOH HOH . M 5 HOH A 31 531 154 HOH HOH . M 5 HOH A 32 532 42 HOH HOH . M 5 HOH A 33 533 152 HOH HOH . M 5 HOH A 34 534 109 HOH HOH . M 5 HOH A 35 535 25 HOH HOH . M 5 HOH A 36 536 139 HOH HOH . M 5 HOH A 37 537 107 HOH HOH . M 5 HOH A 38 538 101 HOH HOH . M 5 HOH A 39 539 132 HOH HOH . M 5 HOH A 40 540 160 HOH HOH . M 5 HOH A 41 541 120 HOH HOH . M 5 HOH A 42 542 20 HOH HOH . M 5 HOH A 43 543 106 HOH HOH . M 5 HOH A 44 544 2 HOH HOH . M 5 HOH A 45 545 55 HOH HOH . M 5 HOH A 46 546 79 HOH HOH . M 5 HOH A 47 547 92 HOH HOH . M 5 HOH A 48 548 173 HOH HOH . M 5 HOH A 49 549 30 HOH HOH . M 5 HOH A 50 550 86 HOH HOH . M 5 HOH A 51 551 140 HOH HOH . M 5 HOH A 52 552 77 HOH HOH . M 5 HOH A 53 553 114 HOH HOH . M 5 HOH A 54 554 46 HOH HOH . M 5 HOH A 55 555 15 HOH HOH . M 5 HOH A 56 556 95 HOH HOH . M 5 HOH A 57 557 122 HOH HOH . M 5 HOH A 58 558 24 HOH HOH . M 5 HOH A 59 559 69 HOH HOH . M 5 HOH A 60 560 29 HOH HOH . M 5 HOH A 61 561 38 HOH HOH . M 5 HOH A 62 562 18 HOH HOH . M 5 HOH A 63 563 166 HOH HOH . M 5 HOH A 64 564 121 HOH HOH . M 5 HOH A 65 565 124 HOH HOH . M 5 HOH A 66 566 138 HOH HOH . M 5 HOH A 67 567 175 HOH HOH . M 5 HOH A 68 568 155 HOH HOH . M 5 HOH A 69 569 3 HOH HOH . M 5 HOH A 70 570 19 HOH HOH . M 5 HOH A 71 571 28 HOH HOH . M 5 HOH A 72 572 73 HOH HOH . M 5 HOH A 73 573 116 HOH HOH . M 5 HOH A 74 574 48 HOH HOH . M 5 HOH A 75 575 131 HOH HOH . M 5 HOH A 76 576 5 HOH HOH . M 5 HOH A 77 577 111 HOH HOH . M 5 HOH A 78 578 98 HOH HOH . M 5 HOH A 79 579 67 HOH HOH . M 5 HOH A 80 580 7 HOH HOH . M 5 HOH A 81 581 68 HOH HOH . M 5 HOH A 82 582 93 HOH HOH . M 5 HOH A 83 583 59 HOH HOH . M 5 HOH A 84 584 53 HOH HOH . M 5 HOH A 85 585 63 HOH HOH . M 5 HOH A 86 586 80 HOH HOH . M 5 HOH A 87 587 167 HOH HOH . M 5 HOH A 88 588 45 HOH HOH . M 5 HOH A 89 589 8 HOH HOH . M 5 HOH A 90 590 52 HOH HOH . M 5 HOH A 91 591 130 HOH HOH . M 5 HOH A 92 592 32 HOH HOH . M 5 HOH A 93 593 9 HOH HOH . M 5 HOH A 94 594 72 HOH HOH . M 5 HOH A 95 595 136 HOH HOH . M 5 HOH A 96 596 123 HOH HOH . M 5 HOH A 97 597 23 HOH HOH . M 5 HOH A 98 598 60 HOH HOH . M 5 HOH A 99 599 65 HOH HOH . M 5 HOH A 100 600 4 HOH HOH . M 5 HOH A 101 601 125 HOH HOH . M 5 HOH A 102 602 91 HOH HOH . M 5 HOH A 103 603 64 HOH HOH . M 5 HOH A 104 604 76 HOH HOH . M 5 HOH A 105 605 21 HOH HOH . M 5 HOH A 106 606 10 HOH HOH . M 5 HOH A 107 607 14 HOH HOH . M 5 HOH A 108 608 56 HOH HOH . M 5 HOH A 109 609 11 HOH HOH . M 5 HOH A 110 610 1 HOH HOH . M 5 HOH A 111 611 119 HOH HOH . M 5 HOH A 112 612 168 HOH HOH . M 5 HOH A 113 613 96 HOH HOH . M 5 HOH A 114 614 22 HOH HOH . M 5 HOH A 115 615 61 HOH HOH . M 5 HOH A 116 616 117 HOH HOH . M 5 HOH A 117 617 128 HOH HOH . M 5 HOH A 118 618 57 HOH HOH . M 5 HOH A 119 619 97 HOH HOH . M 5 HOH A 120 620 27 HOH HOH . M 5 HOH A 121 621 100 HOH HOH . M 5 HOH A 122 622 153 HOH HOH . M 5 HOH A 123 623 37 HOH HOH . M 5 HOH A 124 624 149 HOH HOH . M 5 HOH A 125 625 36 HOH HOH . M 5 HOH A 126 626 88 HOH HOH . M 5 HOH A 127 627 71 HOH HOH . M 5 HOH A 128 628 17 HOH HOH . M 5 HOH A 129 629 137 HOH HOH . M 5 HOH A 130 630 40 HOH HOH . M 5 HOH A 131 631 169 HOH HOH . M 5 HOH A 132 632 66 HOH HOH . M 5 HOH A 133 633 12 HOH HOH . M 5 HOH A 134 634 118 HOH HOH . M 5 HOH A 135 635 126 HOH HOH . M 5 HOH A 136 636 26 HOH HOH . M 5 HOH A 137 637 34 HOH HOH . M 5 HOH A 138 638 146 HOH HOH . M 5 HOH A 139 639 54 HOH HOH . M 5 HOH A 140 640 134 HOH HOH . M 5 HOH A 141 641 58 HOH HOH . M 5 HOH A 142 642 13 HOH HOH . M 5 HOH A 143 643 174 HOH HOH . M 5 HOH A 144 644 110 HOH HOH . M 5 HOH A 145 645 50 HOH HOH . M 5 HOH A 146 646 158 HOH HOH . M 5 HOH A 147 647 113 HOH HOH . M 5 HOH A 148 648 135 HOH HOH . M 5 HOH A 149 649 162 HOH HOH . M 5 HOH A 150 650 133 HOH HOH . M 5 HOH A 151 651 102 HOH HOH . M 5 HOH A 152 652 94 HOH HOH . M 5 HOH A 153 653 164 HOH HOH . M 5 HOH A 154 654 16 HOH HOH . M 5 HOH A 155 655 151 HOH HOH . M 5 HOH A 156 656 171 HOH HOH . M 5 HOH A 157 657 150 HOH HOH . M 5 HOH A 158 658 156 HOH HOH . M 5 HOH A 159 659 129 HOH HOH . M 5 HOH A 160 660 108 HOH HOH . M 5 HOH A 161 661 115 HOH HOH . M 5 HOH A 162 662 103 HOH HOH . M 5 HOH A 163 663 144 HOH HOH . M 5 HOH A 164 664 51 HOH HOH . M 5 HOH A 165 665 161 HOH HOH . M 5 HOH A 166 666 78 HOH HOH . M 5 HOH A 167 667 70 HOH HOH . M 5 HOH A 168 668 6 HOH HOH . M 5 HOH A 169 669 148 HOH HOH . M 5 HOH A 170 670 145 HOH HOH . M 5 HOH A 171 671 165 HOH HOH . M 5 HOH A 172 672 127 HOH HOH . M 5 HOH A 173 673 143 HOH HOH . M 5 HOH A 174 674 172 HOH HOH . M 5 HOH A 175 675 84 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA KC5 . . . B 2 -16.834 24.207 43.534 1 91.24 ? CAA KC5 401 A 1 HETATM 2 C CAF KC5 . . . B 2 -16.734 18.251 46.614 1 33.83 ? CAF KC5 401 A 1 HETATM 3 C CAG KC5 . . . B 2 -17.424 15.718 49.071 1 34.64 ? CAG KC5 401 A 1 HETATM 4 C CAH KC5 . . . B 2 -16.674 20.596 45.384 1 77.18 ? CAH KC5 401 A 1 HETATM 5 C CAI KC5 . . . B 2 -17.139 21.639 47.507 1 82.5 ? CAI KC5 401 A 1 HETATM 6 C CAJ KC5 . . . B 2 -16.726 21.842 44.764 1 86.81 ? CAJ KC5 401 A 1 HETATM 7 C CAK KC5 . . . B 2 -17.183 22.879 46.889 1 90.01 ? CAK KC5 401 A 1 HETATM 8 C CAL KC5 . . . B 2 -16.575 14.657 48.484 1 35.31 ? CAL KC5 401 A 1 HETATM 9 C CAM KC5 . . . B 2 -16.403 14.044 43.73 1 28.76 ? CAM KC5 401 A 1 HETATM 10 C CAQ KC5 . . . B 2 -17.052 16.968 48.656 1 37.66 ? CAQ KC5 401 A 1 HETATM 11 C CAR KC5 . . . B 2 -16.307 12.674 43.593 1 25.41 ? CAR KC5 401 A 1 HETATM 12 C CAS KC5 . . . B 2 -16.845 20.505 46.764 1 69.02 ? CAS KC5 401 A 1 HETATM 13 C CAT KC5 . . . B 2 -16.308 11.926 44.751 1 22.95 ? CAT KC5 401 A 1 HETATM 14 C CAU KC5 . . . B 2 -16.989 22.986 45.517 1 91.67 ? CAU KC5 401 A 1 HETATM 15 C CAV KC5 . . . B 2 -16.405 12.514 45.998 1 29.08 ? CAV KC5 401 A 1 HETATM 16 C CAW KC5 . . . B 2 -16.772 17.041 47.288 1 28.01 ? CAW KC5 401 A 1 HETATM 17 C CAX KC5 . . . B 2 -16.493 14.578 44.944 1 23.7 ? CAX KC5 401 A 1 HETATM 18 C CAY KC5 . . . B 2 -16.649 14.706 47.087 1 24.28 ? CAY KC5 401 A 1 HETATM 19 C CAZ KC5 . . . B 2 -16.642 15.936 46.556 1 24.48 ? CAZ KC5 401 A 1 HETATM 20 C CBA KC5 . . . B 2 -16.494 13.846 46.072 1 27.53 ? CBA KC5 401 A 1 HETATM 21 N NAN KC5 . . . B 2 -16.876 19.333 47.374 1 44.82 ? NAN KC5 401 A 1 HETATM 22 O OAB KC5 . . . B 2 -17.281 17.976 49.325 1 36.37 ? OAB KC5 401 A 1 HETATM 23 O OAC KC5 . . . B 2 -16.216 10.574 44.663 1 28.64 ? OAC KC5 401 A 1 HETATM 24 O OAO KC5 . . . B 2 -17.044 24.226 44.95 1 92.84 ? OAO KC5 401 A 1 HETATM 25 O OAP KC5 . . . B 2 -16.589 15.832 45.276 1 27.22 ? OAP KC5 401 A 1 HETATM 26 CL CL1 KC5 . . . B 2 -16.178 11.95 42.063 1 34.09 ? CL1 KC5 401 A 1 HETATM 27 CL CL2 KC5 . . . B 2 -16.405 11.518 47.396 1 32.58 ? CL2 KC5 401 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 27 #