data_5N9N
#
_model_server_result.job_id            in2y7jgrcc5lnWO4h4BLZQ 
_model_server_result.datetime_utc      '2024-11-28 00:20:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5n9n 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":411}' 
#
_entry.id    5N9N 
#
_exptl.entry_id    5N9N 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          110.97 
_cell.angle_gamma         90 
_cell.entry_id            5N9N 
_cell.length_a            57.477 
_cell.length_b            45.505 
_cell.length_c            63.489 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5N9N 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 K N N 
? 4 L N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 135 n n 
C1 C2 GOL sing 136 n n 
C1 H11 GOL sing 137 n n 
C1 H12 GOL sing 138 n n 
O1 HO1 GOL sing 139 n n 
C2 O2 GOL sing 140 n n 
C2 C3 GOL sing 141 n n 
C2 H2 GOL sing 142 n n 
O2 HO2 GOL sing 143 n n 
C3 O3 GOL sing 144 n n 
C3 H31 GOL sing 145 n n 
C3 H32 GOL sing 146 n n 
O3 HO3 GOL sing 147 n n 
#
_atom_sites.entry_id                     5N9N 
_atom_sites.fract_transf_matrix[1][1]    0.017398 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00667 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021976 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016868 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 KC5 A 1 401 1 KC5 DRG . 
C 3 ACT A 1 402 2 ACT ACT . 
D 3 ACT A 1 403 3 ACT ACT . 
E 3 ACT A 1 404 4 ACT ACT . 
F 3 ACT A 1 405 5 ACT ACT . 
G 3 ACT A 1 406 6 ACT ACT . 
H 4 GOL A 1 407 7 GOL GOL . 
I 4 GOL A 1 408 8 GOL GOL . 
J 4 GOL A 1 409 9 GOL GOL . 
K 4 GOL A 1 410 10 GOL GOL . 
L 4 GOL A 1 411 11 GOL GOL . 
M 5 HOH A 1 501 157 HOH HOH . 
M 5 HOH A 2 502 141 HOH HOH . 
M 5 HOH A 3 503 87 HOH HOH . 
M 5 HOH A 4 504 112 HOH HOH . 
M 5 HOH A 5 505 170 HOH HOH . 
M 5 HOH A 6 506 35 HOH HOH . 
M 5 HOH A 7 507 147 HOH HOH . 
M 5 HOH A 8 508 33 HOH HOH . 
M 5 HOH A 9 509 83 HOH HOH . 
M 5 HOH A 10 510 43 HOH HOH . 
M 5 HOH A 11 511 62 HOH HOH . 
M 5 HOH A 12 512 47 HOH HOH . 
M 5 HOH A 13 513 81 HOH HOH . 
M 5 HOH A 14 514 99 HOH HOH . 
M 5 HOH A 15 515 85 HOH HOH . 
M 5 HOH A 16 516 41 HOH HOH . 
M 5 HOH A 17 517 49 HOH HOH . 
M 5 HOH A 18 518 105 HOH HOH . 
M 5 HOH A 19 519 82 HOH HOH . 
M 5 HOH A 20 520 142 HOH HOH . 
M 5 HOH A 21 521 163 HOH HOH . 
M 5 HOH A 22 522 89 HOH HOH . 
M 5 HOH A 23 523 104 HOH HOH . 
M 5 HOH A 24 524 75 HOH HOH . 
M 5 HOH A 25 525 74 HOH HOH . 
M 5 HOH A 26 526 39 HOH HOH . 
M 5 HOH A 27 527 90 HOH HOH . 
M 5 HOH A 28 528 159 HOH HOH . 
M 5 HOH A 29 529 44 HOH HOH . 
M 5 HOH A 30 530 31 HOH HOH . 
M 5 HOH A 31 531 154 HOH HOH . 
M 5 HOH A 32 532 42 HOH HOH . 
M 5 HOH A 33 533 152 HOH HOH . 
M 5 HOH A 34 534 109 HOH HOH . 
M 5 HOH A 35 535 25 HOH HOH . 
M 5 HOH A 36 536 139 HOH HOH . 
M 5 HOH A 37 537 107 HOH HOH . 
M 5 HOH A 38 538 101 HOH HOH . 
M 5 HOH A 39 539 132 HOH HOH . 
M 5 HOH A 40 540 160 HOH HOH . 
M 5 HOH A 41 541 120 HOH HOH . 
M 5 HOH A 42 542 20 HOH HOH . 
M 5 HOH A 43 543 106 HOH HOH . 
M 5 HOH A 44 544 2 HOH HOH . 
M 5 HOH A 45 545 55 HOH HOH . 
M 5 HOH A 46 546 79 HOH HOH . 
M 5 HOH A 47 547 92 HOH HOH . 
M 5 HOH A 48 548 173 HOH HOH . 
M 5 HOH A 49 549 30 HOH HOH . 
M 5 HOH A 50 550 86 HOH HOH . 
M 5 HOH A 51 551 140 HOH HOH . 
M 5 HOH A 52 552 77 HOH HOH . 
M 5 HOH A 53 553 114 HOH HOH . 
M 5 HOH A 54 554 46 HOH HOH . 
M 5 HOH A 55 555 15 HOH HOH . 
M 5 HOH A 56 556 95 HOH HOH . 
M 5 HOH A 57 557 122 HOH HOH . 
M 5 HOH A 58 558 24 HOH HOH . 
M 5 HOH A 59 559 69 HOH HOH . 
M 5 HOH A 60 560 29 HOH HOH . 
M 5 HOH A 61 561 38 HOH HOH . 
M 5 HOH A 62 562 18 HOH HOH . 
M 5 HOH A 63 563 166 HOH HOH . 
M 5 HOH A 64 564 121 HOH HOH . 
M 5 HOH A 65 565 124 HOH HOH . 
M 5 HOH A 66 566 138 HOH HOH . 
M 5 HOH A 67 567 175 HOH HOH . 
M 5 HOH A 68 568 155 HOH HOH . 
M 5 HOH A 69 569 3 HOH HOH . 
M 5 HOH A 70 570 19 HOH HOH . 
M 5 HOH A 71 571 28 HOH HOH . 
M 5 HOH A 72 572 73 HOH HOH . 
M 5 HOH A 73 573 116 HOH HOH . 
M 5 HOH A 74 574 48 HOH HOH . 
M 5 HOH A 75 575 131 HOH HOH . 
M 5 HOH A 76 576 5 HOH HOH . 
M 5 HOH A 77 577 111 HOH HOH . 
M 5 HOH A 78 578 98 HOH HOH . 
M 5 HOH A 79 579 67 HOH HOH . 
M 5 HOH A 80 580 7 HOH HOH . 
M 5 HOH A 81 581 68 HOH HOH . 
M 5 HOH A 82 582 93 HOH HOH . 
M 5 HOH A 83 583 59 HOH HOH . 
M 5 HOH A 84 584 53 HOH HOH . 
M 5 HOH A 85 585 63 HOH HOH . 
M 5 HOH A 86 586 80 HOH HOH . 
M 5 HOH A 87 587 167 HOH HOH . 
M 5 HOH A 88 588 45 HOH HOH . 
M 5 HOH A 89 589 8 HOH HOH . 
M 5 HOH A 90 590 52 HOH HOH . 
M 5 HOH A 91 591 130 HOH HOH . 
M 5 HOH A 92 592 32 HOH HOH . 
M 5 HOH A 93 593 9 HOH HOH . 
M 5 HOH A 94 594 72 HOH HOH . 
M 5 HOH A 95 595 136 HOH HOH . 
M 5 HOH A 96 596 123 HOH HOH . 
M 5 HOH A 97 597 23 HOH HOH . 
M 5 HOH A 98 598 60 HOH HOH . 
M 5 HOH A 99 599 65 HOH HOH . 
M 5 HOH A 100 600 4 HOH HOH . 
M 5 HOH A 101 601 125 HOH HOH . 
M 5 HOH A 102 602 91 HOH HOH . 
M 5 HOH A 103 603 64 HOH HOH . 
M 5 HOH A 104 604 76 HOH HOH . 
M 5 HOH A 105 605 21 HOH HOH . 
M 5 HOH A 106 606 10 HOH HOH . 
M 5 HOH A 107 607 14 HOH HOH . 
M 5 HOH A 108 608 56 HOH HOH . 
M 5 HOH A 109 609 11 HOH HOH . 
M 5 HOH A 110 610 1 HOH HOH . 
M 5 HOH A 111 611 119 HOH HOH . 
M 5 HOH A 112 612 168 HOH HOH . 
M 5 HOH A 113 613 96 HOH HOH . 
M 5 HOH A 114 614 22 HOH HOH . 
M 5 HOH A 115 615 61 HOH HOH . 
M 5 HOH A 116 616 117 HOH HOH . 
M 5 HOH A 117 617 128 HOH HOH . 
M 5 HOH A 118 618 57 HOH HOH . 
M 5 HOH A 119 619 97 HOH HOH . 
M 5 HOH A 120 620 27 HOH HOH . 
M 5 HOH A 121 621 100 HOH HOH . 
M 5 HOH A 122 622 153 HOH HOH . 
M 5 HOH A 123 623 37 HOH HOH . 
M 5 HOH A 124 624 149 HOH HOH . 
M 5 HOH A 125 625 36 HOH HOH . 
M 5 HOH A 126 626 88 HOH HOH . 
M 5 HOH A 127 627 71 HOH HOH . 
M 5 HOH A 128 628 17 HOH HOH . 
M 5 HOH A 129 629 137 HOH HOH . 
M 5 HOH A 130 630 40 HOH HOH . 
M 5 HOH A 131 631 169 HOH HOH . 
M 5 HOH A 132 632 66 HOH HOH . 
M 5 HOH A 133 633 12 HOH HOH . 
M 5 HOH A 134 634 118 HOH HOH . 
M 5 HOH A 135 635 126 HOH HOH . 
M 5 HOH A 136 636 26 HOH HOH . 
M 5 HOH A 137 637 34 HOH HOH . 
M 5 HOH A 138 638 146 HOH HOH . 
M 5 HOH A 139 639 54 HOH HOH . 
M 5 HOH A 140 640 134 HOH HOH . 
M 5 HOH A 141 641 58 HOH HOH . 
M 5 HOH A 142 642 13 HOH HOH . 
M 5 HOH A 143 643 174 HOH HOH . 
M 5 HOH A 144 644 110 HOH HOH . 
M 5 HOH A 145 645 50 HOH HOH . 
M 5 HOH A 146 646 158 HOH HOH . 
M 5 HOH A 147 647 113 HOH HOH . 
M 5 HOH A 148 648 135 HOH HOH . 
M 5 HOH A 149 649 162 HOH HOH . 
M 5 HOH A 150 650 133 HOH HOH . 
M 5 HOH A 151 651 102 HOH HOH . 
M 5 HOH A 152 652 94 HOH HOH . 
M 5 HOH A 153 653 164 HOH HOH . 
M 5 HOH A 154 654 16 HOH HOH . 
M 5 HOH A 155 655 151 HOH HOH . 
M 5 HOH A 156 656 171 HOH HOH . 
M 5 HOH A 157 657 150 HOH HOH . 
M 5 HOH A 158 658 156 HOH HOH . 
M 5 HOH A 159 659 129 HOH HOH . 
M 5 HOH A 160 660 108 HOH HOH . 
M 5 HOH A 161 661 115 HOH HOH . 
M 5 HOH A 162 662 103 HOH HOH . 
M 5 HOH A 163 663 144 HOH HOH . 
M 5 HOH A 164 664 51 HOH HOH . 
M 5 HOH A 165 665 161 HOH HOH . 
M 5 HOH A 166 666 78 HOH HOH . 
M 5 HOH A 167 667 70 HOH HOH . 
M 5 HOH A 168 668 6 HOH HOH . 
M 5 HOH A 169 669 148 HOH HOH . 
M 5 HOH A 170 670 145 HOH HOH . 
M 5 HOH A 171 671 165 HOH HOH . 
M 5 HOH A 172 672 127 HOH HOH . 
M 5 HOH A 173 673 143 HOH HOH . 
M 5 HOH A 174 674 172 HOH HOH . 
M 5 HOH A 175 675 84 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . L 4 -0.74 2.842 27.536 1 85.2 ? C1 GOL 411 A 1 
HETATM 2 O O1 GOL . . . L 4 -0.43 2.62 28.891 1 84.32 ? O1 GOL 411 A 1 
HETATM 3 C C2 GOL . . . L 4 0.545 2.949 26.728 1 89.69 ? C2 GOL 411 A 1 
HETATM 4 O O2 GOL . . . L 4 0.173 3.113 25.383 1 95.87 ? O2 GOL 411 A 1 
HETATM 5 C C3 GOL . . . L 4 1.33 4.173 27.191 1 86.67 ? C3 GOL 411 A 1 
HETATM 6 O O3 GOL . . . L 4 2.527 4.305 26.458 1 85.51 ? O3 GOL 411 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#