data_5NC3
#
_model_server_result.job_id            BIjguZIWh7Yl41PVFxc3dQ 
_model_server_result.datetime_utc      '2024-10-28 02:21:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5nc3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":802}' 
#
_entry.id    5NC3 
#
_exptl.entry_id    5NC3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              692.629 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ~{N}-[2-[[(2~{S})-2-[[2,3-bis(oxidanyl)phenyl]carbonylamino]-3-[[(2~{S})-2-[[2,3-bis(oxidanyl)phenyl]carbonylamino]-3-oxidanylidene-3-(prop-2-ynylamino)propyl]amino]-3-oxidanylidene-propyl]amino]-2-oxidanylidene-ethyl]-2,3-bis(oxidanyl)benzamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5NC3 
_cell.length_a            86.697 
_cell.length_b            155.171 
_cell.length_c            77.796 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5NC3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 487 A CYS 484 1_555 A SG CYS 494 A CYS 491 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? 
metalc ? metalc1 B FE FE . A FE 801 1_555 C OAJ 8SW . A 8SW 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? 
metalc ? metalc2 B FE FE . A FE 801 1_555 C OAM 8SW . A 8SW 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? 
metalc ? metalc3 B FE FE . A FE 801 1_555 C OAH 8SW . A 8SW 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? 
metalc ? metalc4 B FE FE . A FE 801 1_555 C OAK 8SW . A 8SW 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? 
metalc ? metalc5 B FE FE . A FE 801 1_555 C OAI 8SW . A 8SW 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.96 ? 
metalc ? metalc6 B FE FE . A FE 801 1_555 C OAL 8SW . A 8SW 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? 
#
_chem_comp.formula           'C32 H32 N6 O12' 
_chem_comp.formula_weight    692.629 
_chem_comp.id                8SW 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              ~{N}-[2-[[(2~{S})-2-[[2,3-bis(oxidanyl)phenyl]carbonylamino]-3-[[(2~{S})-2-[[2,3-bis(oxidanyl)phenyl]carbonylamino]-3-oxidanylidene-3-(prop-2-ynylamino)propyl]amino]-3-oxidanylidene-propyl]amino]-2-oxidanylidene-ethyl]-2,3-bis(oxidanyl)benzamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5NC3 
_atom_sites.fract_transf_matrix[1][1]    0.011534 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006444 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012854 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FE A 1 801 1 FE FE . 
C 3 8SW A 1 802 1 8SW DRG . 
D 4 HOH A 1 901 1 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OAM 8SW . . . C 3 0.926 29.945 -48.898 1 112.67 ? OAM 8SW 802 A 1 
HETATM 2 C CBS 8SW . . . C 3 0.231 29.204 -49.809 1 128.46 ? CBS 8SW 802 A 1 
HETATM 3 C CBP 8SW . . . C 3 -1.029 28.746 -49.462 1 127.98 ? CBP 8SW 802 A 1 
HETATM 4 O OAJ 8SW . . . C 3 -1.461 29.058 -48.198 1 89.34 ? OAJ 8SW 802 A 1 
HETATM 5 C CAT 8SW . . . C 3 -1.759 27.996 -50.389 1 135.89 ? CAT 8SW 802 A 1 
HETATM 6 C CAQ 8SW . . . C 3 -1.218 27.72 -51.647 1 122.71 ? CAQ 8SW 802 A 1 
HETATM 7 C CAW 8SW . . . C 3 0.049 28.191 -51.983 1 121.11 ? CAW 8SW 802 A 1 
HETATM 8 C CBV 8SW . . . C 3 0.768 28.971 -51.072 1 140 ? CBV 8SW 802 A 1 
HETATM 9 C CBK 8SW . . . C 3 2.054 29.381 -51.381 1 138 ? CBK 8SW 802 A 1 
HETATM 10 O OAE 8SW . . . C 3 2.757 28.593 -52 1 138.71 ? OAE 8SW 802 A 1 
HETATM 11 N NBG 8SW . . . C 3 2.549 30.503 -50.811 1 135.25 ? NBG 8SW 802 A 1 
HETATM 12 C CBX 8SW . . . C 3 3.993 30.808 -50.984 1 124.95 ? CBX 8SW 802 A 1 
HETATM 13 C CBL 8SW . . . C 3 4.808 29.881 -50.039 1 117.41 ? CBL 8SW 802 A 1 
HETATM 14 O OAF 8SW . . . C 3 4.366 28.804 -49.639 1 121.27 ? OAF 8SW 802 A 1 
HETATM 15 N NBB 8SW . . . C 3 6.044 30.31 -49.762 1 118.84 ? NBB 8SW 802 A 1 
HETATM 16 C CAX 8SW . . . C 3 7.019 29.571 -48.948 1 119.29 ? CAX 8SW 802 A 1 
HETATM 17 C CAN 8SW . . . C 3 8.277 30.36 -49.093 1 134.74 ? CAN 8SW 802 A 1 
HETATM 18 C CAA 8SW . . . C 3 9.298 31.027 -49.06 1 129.65 ? CAA 8SW 802 A 1 
HETATM 19 C CBA 8SW . . . C 3 4.351 32.296 -50.745 1 128.93 ? CBA 8SW 802 A 1 
HETATM 20 N NBE 8SW . . . C 3 4.203 32.706 -49.33 1 138.33 ? NBE 8SW 802 A 1 
HETATM 21 C C 8SW . . . C 3 5.219 32.846 -48.444 1 132.72 ? C 8SW 802 A 1 
HETATM 22 O O 8SW . . . C 3 6.396 32.576 -48.695 1 109.79 ? O 8SW 802 A 1 
HETATM 23 C CA 8SW . . . C 3 4.806 33.335 -47.033 1 117.41 ? CA 8SW 802 A 1 
HETATM 24 N N 8SW . . . C 3 3.328 33.4 -46.952 1 104.66 ? N 8SW 802 A 1 
HETATM 25 C CBJ 8SW . . . C 3 2.68 34.514 -47.335 1 91.71 ? CBJ 8SW 802 A 1 
HETATM 26 O OAD 8SW . . . C 3 3.285 35.501 -47.751 1 86.5 ? OAD 8SW 802 A 1 
HETATM 27 C CBU 8SW . . . C 3 1.274 34.491 -47.349 1 83.1 ? CBU 8SW 802 A 1 
HETATM 28 C CAV 8SW . . . C 3 0.589 35.708 -47.417 1 94.7 ? CAV 8SW 802 A 1 
HETATM 29 C CAP 8SW . . . C 3 -0.806 35.746 -47.468 1 87.94 ? CAP 8SW 802 A 1 
HETATM 30 C CAS 8SW . . . C 3 -1.545 34.567 -47.466 1 80.8 ? CAS 8SW 802 A 1 
HETATM 31 C CBO 8SW . . . C 3 -0.876 33.349 -47.414 1 75.31 ? CBO 8SW 802 A 1 
HETATM 32 O OAI 8SW . . . C 3 -1.507 32.147 -47.42 1 67.07 ? OAI 8SW 802 A 1 
HETATM 33 C CBR 8SW . . . C 3 0.503 33.318 -47.367 1 75.98 ? CBR 8SW 802 A 1 
HETATM 34 O OAL 8SW . . . C 3 1.082 32.089 -47.317 1 82.92 ? OAL 8SW 802 A 1 
HETATM 35 C CB 8SW . . . C 3 5.39 32.406 -45.954 1 106.25 ? CB 8SW 802 A 1 
HETATM 36 N NBD 8SW . . . C 3 4.951 31.004 -46.117 1 93.47 ? NBD 8SW 802 A 1 
HETATM 37 C CBH 8SW . . . C 3 5.51 30.049 -45.362 1 85.18 ? CBH 8SW 802 A 1 
HETATM 38 O OAB 8SW . . . C 3 6.399 30.307 -44.558 1 91.68 ? OAB 8SW 802 A 1 
HETATM 39 C CAY 8SW . . . C 3 4.999 28.603 -45.544 1 80.19 ? CAY 8SW 802 A 1 
HETATM 40 N NBC 8SW . . . C 3 3.535 28.538 -45.297 1 106.9 ? NBC 8SW 802 A 1 
HETATM 41 C CBI 8SW . . . C 3 2.983 28.238 -44.096 1 110.29 ? CBI 8SW 802 A 1 
HETATM 42 O OAC 8SW . . . C 3 3.671 27.976 -43.111 1 104.5 ? OAC 8SW 802 A 1 
HETATM 43 C CBT 8SW . . . C 3 1.568 28.216 -43.986 1 122.37 ? CBT 8SW 802 A 1 
HETATM 44 C CAU 8SW . . . C 3 0.991 27.653 -42.837 1 123.19 ? CAU 8SW 802 A 1 
HETATM 45 C CAO 8SW . . . C 3 -0.398 27.596 -42.65 1 107.12 ? CAO 8SW 802 A 1 
HETATM 46 C CAR 8SW . . . C 3 -1.267 28.107 -43.611 1 116.18 ? CAR 8SW 802 A 1 
HETATM 47 C CBN 8SW . . . C 3 -0.72 28.676 -44.762 1 133.01 ? CBN 8SW 802 A 1 
HETATM 48 O OAH 8SW . . . C 3 -1.473 29.206 -45.777 1 115.08 ? OAH 8SW 802 A 1 
HETATM 49 C CBQ 8SW . . . C 3 0.662 28.725 -44.937 1 124.38 ? CBQ 8SW 802 A 1 
HETATM 50 O OAK 8SW . . . C 3 1.106 29.296 -46.092 1 112.09 ? OAK 8SW 802 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           270 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           50 
#