data_5NCQ # _model_server_result.job_id MKXXFDx0LJKAoyX-RFTK4A _model_server_result.datetime_utc '2024-11-14 16:52:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ncq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1005}' # _entry.id 5NCQ # _exptl.entry_id 5NCQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 439.269 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1~{S})-~{N}-[(4-bromophenyl)methyl]-7-(trifluoromethyloxy)-2,3,4,9-tetrahydro-1~{H}-carbazol-1-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5NCQ _cell.length_a 125.62 _cell.length_b 224.63 _cell.length_c 57.05 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NCQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LYS 712 A LYS 712 1_555 C K K . A K 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.861 ? metalc ? metalc2 A O ALA 714 A ALA 714 1_555 C K K . A K 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.901 ? metalc ? metalc3 A OE1 GLU 732 A GLU 732 1_555 C K K . A K 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.055 ? metalc ? metalc4 A OE2 GLU 732 A GLU 732 1_555 C K K . A K 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.389 ? metalc ? metalc5 C K K . A K 1002 1_555 G O HOH . A HOH 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.816 ? metalc ? metalc6 C K K . A K 1002 1_555 G O HOH . A HOH 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.066 ? # _chem_comp.formula 'C20 H18 Br F3 N2 O' _chem_comp.formula_weight 439.269 _chem_comp.id 8T8 _chem_comp.mon_nstd_flag . _chem_comp.name (1~{S})-~{N}-[(4-bromophenyl)methyl]-7-(trifluoromethyloxy)-2,3,4,9-tetrahydro-1~{H}-carbazol-1-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag BR CAS 8T8 sing 68 n n CAS CAF 8T8 doub 69 n y CAS CAE 8T8 sing 70 n y CAF CAH 8T8 sing 71 n y CAE CAG 8T8 doub 72 n y CAJ CAI 8T8 doub 73 n y CAJ CAY 8T8 sing 74 n y CAM CAL 8T8 sing 75 n n CAM CAV 8T8 sing 76 n n CAI CAU 8T8 sing 77 n y CAH CAT 8T8 doub 78 n y CAY CAV 8T8 sing 79 n y CAY CAX 8T8 doub 80 n y CAL CAN 8T8 sing 81 n n CAG CAT 8T8 sing 82 n y CAV CAW 8T8 doub 83 n y CAT CAO 8T8 sing 84 n n CAU OAR 8T8 sing 85 n n CAU CAK 8T8 doub 86 n y FAA CBA 8T8 sing 87 n n OAR CBA 8T8 sing 88 n n CAN CAZ 8T8 sing 89 n n CAX CAK 8T8 sing 90 n y CAX NAQ 8T8 sing 91 n y CAW CAZ 8T8 sing 92 n n CAW NAQ 8T8 sing 93 n y CBA FAB 8T8 sing 94 n n CBA FAC 8T8 sing 95 n n CAO NAP 8T8 sing 96 n n CAZ NAP 8T8 sing 97 n n CAK H1 8T8 sing 98 n n CAI H2 8T8 sing 99 n n CAJ H3 8T8 sing 100 n n NAQ H4 8T8 sing 101 n n CAM H5 8T8 sing 102 n n CAM H6 8T8 sing 103 n n CAL H7 8T8 sing 104 n n CAL H8 8T8 sing 105 n n CAN H9 8T8 sing 106 n n CAN H10 8T8 sing 107 n n CAZ H11 8T8 sing 108 n n NAP H12 8T8 sing 109 n n CAO H14 8T8 sing 110 n n CAO H15 8T8 sing 111 n n CAG H16 8T8 sing 112 n n CAE H17 8T8 sing 113 n n CAF H18 8T8 sing 114 n n CAH H19 8T8 sing 115 n n # _atom_sites.entry_id 5NCQ _atom_sites.fract_transf_matrix[1][1] 0.007961 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004452 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017528 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 128 A 1 1001 1001 128 128 . C 3 K A 1 1002 1002 K K . D 4 PCW A 1 1003 1005 PCW PCW . E 4 PCW A 1 1004 1006 PCW PCW . F 5 8T8 A 1 1005 1007 8T8 8T8 . G 6 HOH A 1 1101 1004 HOH HOH . G 6 HOH A 2 1102 1003 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F FAA 8T8 . . . F 5 20.361 15.712 14.321 1 105.47 ? FAA 8T8 1005 A 1 HETATM 2 C CBA 8T8 . . . F 5 20.492 16.803 15.072 1 97.14 ? CBA 8T8 1005 A 1 HETATM 3 F FAB 8T8 . . . F 5 21.746 16.826 15.516 1 100.21 ? FAB 8T8 1005 A 1 HETATM 4 F FAC 8T8 . . . F 5 19.699 16.668 16.134 1 91.14 ? FAC 8T8 1005 A 1 HETATM 5 O OAR 8T8 . . . F 5 20.276 17.943 14.313 1 94.31 ? OAR 8T8 1005 A 1 HETATM 6 C CAU 8T8 . . . F 5 18.995 18.444 14.097 1 92.12 ? CAU 8T8 1005 A 1 HETATM 7 C CAK 8T8 . . . F 5 18.372 19.185 15.082 1 91.11 ? CAK 8T8 1005 A 1 HETATM 8 C CAI 8T8 . . . F 5 18.367 18.212 12.853 1 91.11 ? CAI 8T8 1005 A 1 HETATM 9 C CAJ 8T8 . . . F 5 17.099 18.717 12.613 1 91.11 ? CAJ 8T8 1005 A 1 HETATM 10 C CAY 8T8 . . . F 5 16.414 19.469 13.585 1 91.11 ? CAY 8T8 1005 A 1 HETATM 11 C CAX 8T8 . . . F 5 17.082 19.69 14.827 1 91.11 ? CAX 8T8 1005 A 1 HETATM 12 N NAQ 8T8 . . . F 5 16.226 20.445 15.639 1 98.56 ? NAQ 8T8 1005 A 1 HETATM 13 C CAW 8T8 . . . F 5 15.069 20.706 14.934 1 98.64 ? CAW 8T8 1005 A 1 HETATM 14 C CAV 8T8 . . . F 5 15.137 20.134 13.691 1 91.11 ? CAV 8T8 1005 A 1 HETATM 15 C CAM 8T8 . . . F 5 13.997 20.267 12.766 1 91.11 ? CAM 8T8 1005 A 1 HETATM 16 C CAL 8T8 . . . F 5 12.711 20.068 13.567 1 91.11 ? CAL 8T8 1005 A 1 HETATM 17 C CAN 8T8 . . . F 5 12.556 21.125 14.689 1 91.11 ? CAN 8T8 1005 A 1 HETATM 18 C CAZ 8T8 . . . F 5 13.865 21.507 15.436 1 99.02 ? CAZ 8T8 1005 A 1 HETATM 19 N NAP 8T8 . A . F 5 14.065 22.972 15.477 0.5 108.2 ? NAP 8T8 1005 A 1 HETATM 20 N NAP 8T8 . B . F 5 14.139 22.935 15.182 0.5 108.46 ? NAP 8T8 1005 A 1 HETATM 21 C CAO 8T8 . A . F 5 15.436 23.449 15.166 0.5 107.4 ? CAO 8T8 1005 A 1 HETATM 22 C CAO 8T8 . B . F 5 14.994 23.648 16.202 0.5 106.78 ? CAO 8T8 1005 A 1 HETATM 23 C CAT 8T8 . A . F 5 15.502 24.293 13.922 0.5 104.19 ? CAT 8T8 1005 A 1 HETATM 24 C CAT 8T8 . B . F 5 16.512 23.485 16.058 0.5 105.12 ? CAT 8T8 1005 A 1 HETATM 25 C CAG 8T8 . A . F 5 14.589 25.325 13.701 0.5 102.83 ? CAG 8T8 1005 A 1 HETATM 26 C CAG 8T8 . B . F 5 17.137 23.253 14.825 0.5 103.68 ? CAG 8T8 1005 A 1 HETATM 27 C CAE 8T8 . A . F 5 14.646 26.103 12.548 0.5 106.78 ? CAE 8T8 1005 A 1 HETATM 28 C CAE 8T8 . B . F 5 18.525 23.103 14.727 0.5 105 ? CAE 8T8 1005 A 1 HETATM 29 C CAS 8T8 . A . F 5 15.628 25.835 11.616 0.5 113.58 ? CAS 8T8 1005 A 1 HETATM 30 C CAS 8T8 . B . F 5 19.288 23.201 15.877 0.5 112.08 ? CAS 8T8 1005 A 1 HETATM 31 BR BR 8T8 . A . F 5 15.702 26.896 10.052 0.5 130.32 ? BR 8T8 1005 A 1 HETATM 32 BR BR 8T8 . B . F 5 21.173 23.01 15.743 0.5 126.76 ? BR 8T8 1005 A 1 HETATM 33 C CAF 8T8 . A . F 5 16.549 24.823 11.794 0.5 107.13 ? CAF 8T8 1005 A 1 HETATM 34 C CAF 8T8 . B . F 5 18.717 23.435 17.11 0.5 104.83 ? CAF 8T8 1005 A 1 HETATM 35 C CAH 8T8 . A . F 5 16.475 24.057 12.951 0.5 104.12 ? CAH 8T8 1005 A 1 HETATM 36 C CAH 8T8 . B . F 5 17.335 23.587 17.184 0.5 102.69 ? CAH 8T8 1005 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 40 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 36 #