data_5NEL
#
_model_server_result.job_id            xPnrir0lGN7RuXwfEHIOWQ 
_model_server_result.datetime_utc      '2024-11-28 19:18:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5nel 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":301}' 
#
_entry.id    5NEL 
#
_exptl.entry_id    5NEL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.1 
_cell.angle_gamma         90 
_cell.entry_id            5NEL 
_cell.length_a            49.437 
_cell.length_b            117.975 
_cell.length_c            98.199 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5NEL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 K N N 
? 2 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 51 A ASP 77 1_555 E ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? 
metalc ? metalc2 A NE2 HIS 100 A HIS 126 1_555 E ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? 
metalc ? metalc3 A NE2 HIS 104 A HIS 130 1_555 E ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? 
metalc ? metalc4 E ZN ZN . A ZN 301 1_555 F O ACT . A ACT 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? 
metalc ? metalc5 E ZN ZN . A ZN 301 1_555 F OXT ACT . A ACT 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? 
metalc ? metalc6 E ZN ZN . A ZN 301 1_555 P O HOH . A HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? 
metalc ? metalc7 B OD1 ASP 51 B ASP 77 1_555 G ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? 
metalc ? metalc8 B NE2 HIS 100 B HIS 126 1_555 G ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? 
metalc ? metalc9 B NE2 HIS 104 B HIS 130 1_555 G ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? 
metalc ? metalc10 G ZN ZN . B ZN 301 1_555 H O4 NHT . B NHT 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? 
metalc ? metalc11 G ZN ZN . B ZN 301 1_555 H O6 NHT . B NHT 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? 
metalc ? metalc12 C OD1 ASP 51 C ASP 77 1_555 K ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? 
metalc ? metalc13 C NE2 HIS 100 C HIS 126 1_555 K ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? 
metalc ? metalc14 C NE2 HIS 104 C HIS 130 1_555 K ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? 
metalc ? metalc15 K ZN ZN . C ZN 301 1_555 L O ACT . C ACT 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.664 ? 
metalc ? metalc16 K ZN ZN . C ZN 301 1_555 L OXT ACT . C ACT 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? 
metalc ? metalc17 K ZN ZN . C ZN 301 1_555 R O HOH . C HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? 
metalc ? metalc18 D OD1 ASP 51 D ASP 77 1_555 M ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? 
metalc ? metalc19 D NE2 HIS 100 D HIS 126 1_555 M ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? 
metalc ? metalc20 D NE2 HIS 104 D HIS 130 1_555 M ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? 
metalc ? metalc21 M ZN ZN . D ZN 301 1_555 N O6 NHT . D NHT 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? 
metalc ? metalc22 M ZN ZN . D ZN 301 1_555 N O4 NHT . D NHT 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5NEL 
_atom_sites.fract_transf_matrix[1][1]    0.020228 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004336 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008476 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010415 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 ZN A 1 301 280 ZN ZN . 
F 3 ACT A 1 302 300 ACT ACT . 
G 2 ZN B 1 301 280 ZN ZN . 
H 4 NHT B 1 302 300 NHT LIG . 
I 5 PGE B 1 303 1 PGE PGE . 
J 6 EDO B 1 304 1 EDO EDO . 
K 2 ZN C 1 301 280 ZN ZN . 
L 3 ACT C 1 302 300 ACT ACT . 
M 2 ZN D 1 301 280 ZN ZN . 
N 4 NHT D 1 302 300 NHT LIG . 
O 7 CIT D 1 303 1 CIT CIT . 
P 8 HOH A 1 401 50 HOH HOH . 
P 8 HOH A 2 402 59 HOH HOH . 
P 8 HOH A 3 403 35 HOH HOH . 
P 8 HOH A 4 404 45 HOH HOH . 
P 8 HOH A 5 405 36 HOH HOH . 
P 8 HOH A 6 406 22 HOH HOH . 
P 8 HOH A 7 407 11 HOH HOH . 
P 8 HOH A 8 408 10 HOH HOH . 
P 8 HOH A 9 409 17 HOH HOH . 
P 8 HOH A 10 410 56 HOH HOH . 
P 8 HOH A 11 411 44 HOH HOH . 
P 8 HOH A 12 412 4 HOH HOH . 
P 8 HOH A 13 413 53 HOH HOH . 
P 8 HOH A 14 414 42 HOH HOH . 
P 8 HOH A 15 415 24 HOH HOH . 
Q 8 HOH B 1 401 12 HOH HOH . 
Q 8 HOH B 2 402 9 HOH HOH . 
Q 8 HOH B 3 403 1 HOH HOH . 
Q 8 HOH B 4 404 26 HOH HOH . 
Q 8 HOH B 5 405 21 HOH HOH . 
Q 8 HOH B 6 406 32 HOH HOH . 
Q 8 HOH B 7 407 15 HOH HOH . 
Q 8 HOH B 8 408 57 HOH HOH . 
Q 8 HOH B 9 409 25 HOH HOH . 
Q 8 HOH B 10 410 28 HOH HOH . 
Q 8 HOH B 11 411 5 HOH HOH . 
Q 8 HOH B 12 412 55 HOH HOH . 
Q 8 HOH B 13 413 2 HOH HOH . 
Q 8 HOH B 14 414 38 HOH HOH . 
Q 8 HOH B 15 415 23 HOH HOH . 
Q 8 HOH B 16 416 27 HOH HOH . 
Q 8 HOH B 17 417 52 HOH HOH . 
Q 8 HOH B 18 418 49 HOH HOH . 
Q 8 HOH B 19 419 37 HOH HOH . 
R 8 HOH C 1 401 20 HOH HOH . 
R 8 HOH C 2 402 14 HOH HOH . 
R 8 HOH C 3 403 58 HOH HOH . 
R 8 HOH C 4 404 40 HOH HOH . 
R 8 HOH C 5 405 3 HOH HOH . 
R 8 HOH C 6 406 29 HOH HOH . 
R 8 HOH C 7 407 33 HOH HOH . 
R 8 HOH C 8 408 47 HOH HOH . 
R 8 HOH C 9 409 31 HOH HOH . 
R 8 HOH C 10 410 39 HOH HOH . 
R 8 HOH C 11 411 16 HOH HOH . 
R 8 HOH C 12 412 43 HOH HOH . 
R 8 HOH C 13 413 19 HOH HOH . 
R 8 HOH C 14 414 34 HOH HOH . 
S 8 HOH D 1 401 48 HOH HOH . 
S 8 HOH D 2 402 13 HOH HOH . 
S 8 HOH D 3 403 7 HOH HOH . 
S 8 HOH D 4 404 46 HOH HOH . 
S 8 HOH D 5 405 6 HOH HOH . 
S 8 HOH D 6 406 18 HOH HOH . 
S 8 HOH D 7 407 8 HOH HOH . 
S 8 HOH D 8 408 51 HOH HOH . 
S 8 HOH D 9 409 30 HOH HOH . 
S 8 HOH D 10 410 54 HOH HOH . 
S 8 HOH D 11 411 41 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         G 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               19.969 
_atom_site.Cartn_y               13.954 
_atom_site.Cartn_z               130.817 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        64.84 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           301 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           1 
#