data_5NFI
#
_model_server_result.job_id            A-FVHmMKfgO4-D4s6W_yKQ 
_model_server_result.datetime_utc      '2025-02-26 07:17:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5nfi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":402}' 
#
_entry.id    5NFI 
#
_exptl.entry_id    5NFI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              126.904 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'IODIDE ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.76 
_cell.angle_gamma         90 
_cell.entry_id            5NFI 
_cell.length_a            101.6 
_cell.length_b            83.21 
_cell.length_c            38.74 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5NFI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 15 B CYS 54 1_555 A SG CYS 246 B CYS 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf2 A SG CYS 259 B CYS 298 1_555 A SG CYS 261 B CYS 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
covale ? covale1 A C LEU 94 B LEU 133 1_555 A N MSE 95 B MSE 134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale2 A C MSE 95 B MSE 134 1_555 A N ARG 96 B ARG 135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale3 A C ASN 124 B ASN 163 1_555 A N MSE 125 B MSE 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale4 A C MSE 125 B MSE 164 1_555 A N GLU 126 B GLU 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
#
_chem_comp.formula           'I -1' 
_chem_comp.formula_weight    126.904 
_chem_comp.id                IOD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'IODIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5NFI 
_atom_sites.fract_transf_matrix[1][1]    0.009843 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00082 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012018 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.025902 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 IOD B 1 401 2 IOD I . 
C 2 IOD B 1 402 3 IOD I . 
D 3 HOH B 1 501 15 HOH HOH . 
D 3 HOH B 2 502 18 HOH HOH . 
D 3 HOH B 3 503 46 HOH HOH . 
D 3 HOH B 4 504 24 HOH HOH . 
D 3 HOH B 5 505 25 HOH HOH . 
D 3 HOH B 6 506 37 HOH HOH . 
D 3 HOH B 7 507 6 HOH HOH . 
D 3 HOH B 8 508 47 HOH HOH . 
D 3 HOH B 9 509 45 HOH HOH . 
D 3 HOH B 10 510 19 HOH HOH . 
D 3 HOH B 11 511 3 HOH HOH . 
D 3 HOH B 12 512 16 HOH HOH . 
D 3 HOH B 13 513 38 HOH HOH . 
D 3 HOH B 14 514 31 HOH HOH . 
D 3 HOH B 15 515 35 HOH HOH . 
D 3 HOH B 16 516 29 HOH HOH . 
D 3 HOH B 17 517 36 HOH HOH . 
D 3 HOH B 18 518 41 HOH HOH . 
D 3 HOH B 19 519 44 HOH HOH . 
D 3 HOH B 20 520 32 HOH HOH . 
D 3 HOH B 21 521 28 HOH HOH . 
D 3 HOH B 22 522 43 HOH HOH . 
D 3 HOH B 23 523 40 HOH HOH . 
D 3 HOH B 24 524 33 HOH HOH . 
D 3 HOH B 25 525 42 HOH HOH . 
D 3 HOH B 26 526 48 HOH HOH . 
D 3 HOH B 27 527 49 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           I 
_atom_site.label_atom_id         I 
_atom_site.label_comp_id         IOD 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               31.959 
_atom_site.Cartn_y               -5.463 
_atom_site.Cartn_z               -0.434 
_atom_site.occupancy             0.59 
_atom_site.B_iso_or_equiv        54.57 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          I 
_atom_site.auth_comp_id          IOD 
_atom_site.auth_seq_id           402 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#