data_5NFP
#
_model_server_result.job_id            lgxR07G0k9aqjILihRwE9g 
_model_server_result.datetime_utc      '2024-10-12 22:20:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5nfp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":802}' 
#
_entry.id    5NFP 
#
_exptl.entry_id    5NFP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5NFP 
_cell.length_a            83.99 
_cell.length_b            83.99 
_cell.length_c            106.09 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5NFP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 255 n n 
C1 C2 EDO sing 256 n n 
C1 H11 EDO sing 257 n n 
C1 H12 EDO sing 258 n n 
O1 HO1 EDO sing 259 n n 
C2 O2 EDO sing 260 n n 
C2 H21 EDO sing 261 n n 
C2 H22 EDO sing 262 n n 
O2 HO2 EDO sing 263 n n 
#
_atom_sites.entry_id                     5NFP 
_atom_sites.fract_transf_matrix[1][1]    0.011906 
_atom_sites.fract_transf_matrix[1][2]    0.006874 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013748 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009426 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 CPS A 1 801 100 CPS CPS . 
D 4 EDO A 1 802 101 EDO EDO . 
E 5 GOL A 1 803 102 GOL GOL . 
F 6 8W5 A 1 804 1 8W5 INH . 
G 7 HOH A 1 901 9 HOH HOH . 
G 7 HOH A 2 902 32 HOH HOH . 
G 7 HOH A 3 903 29 HOH HOH . 
G 7 HOH A 4 904 154 HOH HOH . 
G 7 HOH A 5 905 26 HOH HOH . 
G 7 HOH A 6 906 18 HOH HOH . 
G 7 HOH A 7 907 56 HOH HOH . 
G 7 HOH A 8 908 7 HOH HOH . 
G 7 HOH A 9 909 58 HOH HOH . 
G 7 HOH A 10 910 155 HOH HOH . 
G 7 HOH A 11 911 16 HOH HOH . 
G 7 HOH A 12 912 82 HOH HOH . 
G 7 HOH A 13 913 114 HOH HOH . 
G 7 HOH A 14 914 23 HOH HOH . 
G 7 HOH A 15 915 11 HOH HOH . 
G 7 HOH A 16 916 165 HOH HOH . 
G 7 HOH A 17 917 129 HOH HOH . 
G 7 HOH A 18 918 17 HOH HOH . 
G 7 HOH A 19 919 35 HOH HOH . 
G 7 HOH A 20 920 14 HOH HOH . 
G 7 HOH A 21 921 107 HOH HOH . 
G 7 HOH A 22 922 59 HOH HOH . 
G 7 HOH A 23 923 63 HOH HOH . 
G 7 HOH A 24 924 40 HOH HOH . 
G 7 HOH A 25 925 147 HOH HOH . 
G 7 HOH A 26 926 161 HOH HOH . 
G 7 HOH A 27 927 4 HOH HOH . 
G 7 HOH A 28 928 5 HOH HOH . 
G 7 HOH A 29 929 27 HOH HOH . 
G 7 HOH A 30 930 47 HOH HOH . 
G 7 HOH A 31 931 96 HOH HOH . 
G 7 HOH A 32 932 50 HOH HOH . 
G 7 HOH A 33 933 143 HOH HOH . 
G 7 HOH A 34 934 86 HOH HOH . 
G 7 HOH A 35 935 36 HOH HOH . 
G 7 HOH A 36 936 37 HOH HOH . 
G 7 HOH A 37 937 74 HOH HOH . 
G 7 HOH A 38 938 12 HOH HOH . 
G 7 HOH A 39 939 116 HOH HOH . 
G 7 HOH A 40 940 81 HOH HOH . 
G 7 HOH A 41 941 46 HOH HOH . 
G 7 HOH A 42 942 179 HOH HOH . 
G 7 HOH A 43 943 177 HOH HOH . 
G 7 HOH A 44 944 175 HOH HOH . 
G 7 HOH A 45 945 64 HOH HOH . 
G 7 HOH A 46 946 19 HOH HOH . 
G 7 HOH A 47 947 21 HOH HOH . 
G 7 HOH A 48 948 65 HOH HOH . 
G 7 HOH A 49 949 99 HOH HOH . 
G 7 HOH A 50 950 20 HOH HOH . 
G 7 HOH A 51 951 180 HOH HOH . 
G 7 HOH A 52 952 172 HOH HOH . 
G 7 HOH A 53 953 66 HOH HOH . 
G 7 HOH A 54 954 128 HOH HOH . 
G 7 HOH A 55 955 10 HOH HOH . 
G 7 HOH A 56 956 104 HOH HOH . 
G 7 HOH A 57 957 28 HOH HOH . 
G 7 HOH A 58 958 61 HOH HOH . 
G 7 HOH A 59 959 138 HOH HOH . 
G 7 HOH A 60 960 164 HOH HOH . 
G 7 HOH A 61 961 13 HOH HOH . 
G 7 HOH A 62 962 146 HOH HOH . 
G 7 HOH A 63 963 140 HOH HOH . 
G 7 HOH A 64 964 8 HOH HOH . 
G 7 HOH A 65 965 57 HOH HOH . 
G 7 HOH A 66 966 39 HOH HOH . 
G 7 HOH A 67 967 142 HOH HOH . 
G 7 HOH A 68 968 125 HOH HOH . 
G 7 HOH A 69 969 112 HOH HOH . 
G 7 HOH A 70 970 2 HOH HOH . 
G 7 HOH A 71 971 130 HOH HOH . 
G 7 HOH A 72 972 93 HOH HOH . 
G 7 HOH A 73 973 149 HOH HOH . 
G 7 HOH A 74 974 127 HOH HOH . 
G 7 HOH A 75 975 42 HOH HOH . 
G 7 HOH A 76 976 52 HOH HOH . 
G 7 HOH A 77 977 150 HOH HOH . 
G 7 HOH A 78 978 136 HOH HOH . 
G 7 HOH A 79 979 15 HOH HOH . 
G 7 HOH A 80 980 95 HOH HOH . 
G 7 HOH A 81 981 62 HOH HOH . 
G 7 HOH A 82 982 106 HOH HOH . 
G 7 HOH A 83 983 170 HOH HOH . 
G 7 HOH A 84 984 123 HOH HOH . 
G 7 HOH A 85 985 137 HOH HOH . 
G 7 HOH A 86 986 182 HOH HOH . 
G 7 HOH A 87 987 24 HOH HOH . 
G 7 HOH A 88 988 133 HOH HOH . 
G 7 HOH A 89 989 135 HOH HOH . 
G 7 HOH A 90 990 117 HOH HOH . 
G 7 HOH A 91 991 55 HOH HOH . 
G 7 HOH A 92 992 85 HOH HOH . 
G 7 HOH A 93 993 167 HOH HOH . 
G 7 HOH A 94 994 78 HOH HOH . 
G 7 HOH A 95 995 145 HOH HOH . 
G 7 HOH A 96 996 31 HOH HOH . 
G 7 HOH A 97 997 132 HOH HOH . 
G 7 HOH A 98 998 178 HOH HOH . 
G 7 HOH A 99 999 176 HOH HOH . 
G 7 HOH A 100 1000 33 HOH HOH . 
G 7 HOH A 101 1001 67 HOH HOH . 
G 7 HOH A 102 1002 134 HOH HOH . 
G 7 HOH A 103 1003 174 HOH HOH . 
G 7 HOH A 104 1004 98 HOH HOH . 
G 7 HOH A 105 1005 181 HOH HOH . 
G 7 HOH A 106 1006 94 HOH HOH . 
G 7 HOH A 107 1007 126 HOH HOH . 
G 7 HOH A 108 1008 139 HOH HOH . 
G 7 HOH A 109 1009 173 HOH HOH . 
G 7 HOH A 110 1010 71 HOH HOH . 
G 7 HOH A 111 1011 169 HOH HOH . 
G 7 HOH A 112 1012 158 HOH HOH . 
G 7 HOH A 113 1013 68 HOH HOH . 
G 7 HOH A 114 1014 131 HOH HOH . 
G 7 HOH A 115 1015 122 HOH HOH . 
G 7 HOH A 116 1016 168 HOH HOH . 
G 7 HOH A 117 1017 115 HOH HOH . 
G 7 HOH A 118 1018 141 HOH HOH . 
G 7 HOH A 119 1019 113 HOH HOH . 
G 7 HOH A 120 1020 148 HOH HOH . 
G 7 HOH A 121 1021 171 HOH HOH . 
G 7 HOH A 122 1022 166 HOH HOH . 
G 7 HOH A 123 1023 144 HOH HOH . 
G 7 HOH A 124 1024 118 HOH HOH . 
G 7 HOH A 125 1025 119 HOH HOH . 
G 7 HOH A 126 1026 160 HOH HOH . 
G 7 HOH A 127 1027 121 HOH HOH . 
G 7 HOH A 128 1028 120 HOH HOH . 
G 7 HOH A 129 1029 157 HOH HOH . 
G 7 HOH A 130 1030 162 HOH HOH . 
G 7 HOH A 131 1031 163 HOH HOH . 
G 7 HOH A 132 1032 159 HOH HOH . 
G 7 HOH A 133 1033 124 HOH HOH . 
H 7 HOH B 1 801 69 HOH HOH . 
H 7 HOH B 2 802 3 HOH HOH . 
H 7 HOH B 3 803 43 HOH HOH . 
H 7 HOH B 4 804 1 HOH HOH . 
H 7 HOH B 5 805 156 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 4 -3.182 -35.18 -20.375 1 56.75 ? C1 EDO 802 A 1 
HETATM 2 O O1 EDO . . . D 4 -3.037 -36.296 -21.232 1 56.96 ? O1 EDO 802 A 1 
HETATM 3 C C2 EDO . . . D 4 -2.182 -35.328 -19.25 1 58.25 ? C2 EDO 802 A 1 
HETATM 4 O O2 EDO . . . D 4 -2.452 -36.545 -18.591 1 61.32 ? O2 EDO 802 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
#