data_5NFT # _model_server_result.job_id i3tzu7AebdAWvNRdIeSrUg _model_server_result.datetime_utc '2024-10-13 00:19:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5nft # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":801}' # _entry.id 5NFT # _exptl.entry_id 5NFT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5NFT _cell.length_a 84.371 _cell.length_b 84.371 _cell.length_c 106.119 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NFT _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 142 n n C1 C2 EDO sing 143 n n C1 H11 EDO sing 144 n n C1 H12 EDO sing 145 n n O1 HO1 EDO sing 146 n n C2 O2 EDO sing 147 n n C2 H21 EDO sing 148 n n C2 H22 EDO sing 149 n n O2 HO2 EDO sing 150 n n # _atom_sites.entry_id 5NFT _atom_sites.fract_transf_matrix[1][1] 0.011852 _atom_sites.fract_transf_matrix[1][2] 0.006843 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013686 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009423 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EDO A 1 801 1 EDO EDO . D 3 EDO A 1 802 2 EDO EDO . E 3 EDO A 1 803 3 EDO EDO . F 4 8W8 A 1 804 1 8W8 INH . G 5 HOH A 1 901 25 HOH HOH . G 5 HOH A 2 902 6 HOH HOH . G 5 HOH A 3 903 32 HOH HOH . G 5 HOH A 4 904 18 HOH HOH . G 5 HOH A 5 905 63 HOH HOH . G 5 HOH A 6 906 33 HOH HOH . G 5 HOH A 7 907 127 HOH HOH . G 5 HOH A 8 908 17 HOH HOH . G 5 HOH A 9 909 16 HOH HOH . G 5 HOH A 10 910 100 HOH HOH . G 5 HOH A 11 911 116 HOH HOH . G 5 HOH A 12 912 56 HOH HOH . G 5 HOH A 13 913 123 HOH HOH . G 5 HOH A 14 914 112 HOH HOH . G 5 HOH A 15 915 12 HOH HOH . G 5 HOH A 16 916 9 HOH HOH . G 5 HOH A 17 917 24 HOH HOH . G 5 HOH A 18 918 10 HOH HOH . G 5 HOH A 19 919 11 HOH HOH . G 5 HOH A 20 920 48 HOH HOH . G 5 HOH A 21 921 96 HOH HOH . G 5 HOH A 22 922 53 HOH HOH . G 5 HOH A 23 923 2 HOH HOH . G 5 HOH A 24 924 47 HOH HOH . G 5 HOH A 25 925 38 HOH HOH . G 5 HOH A 26 926 44 HOH HOH . G 5 HOH A 27 927 46 HOH HOH . G 5 HOH A 28 928 51 HOH HOH . G 5 HOH A 29 929 75 HOH HOH . G 5 HOH A 30 930 102 HOH HOH . G 5 HOH A 31 931 97 HOH HOH . G 5 HOH A 32 932 140 HOH HOH . G 5 HOH A 33 933 89 HOH HOH . G 5 HOH A 34 934 5 HOH HOH . G 5 HOH A 35 935 58 HOH HOH . G 5 HOH A 36 936 109 HOH HOH . G 5 HOH A 37 937 19 HOH HOH . G 5 HOH A 38 938 148 HOH HOH . G 5 HOH A 39 939 7 HOH HOH . G 5 HOH A 40 940 59 HOH HOH . G 5 HOH A 41 941 40 HOH HOH . G 5 HOH A 42 942 95 HOH HOH . G 5 HOH A 43 943 61 HOH HOH . G 5 HOH A 44 944 15 HOH HOH . G 5 HOH A 45 945 52 HOH HOH . G 5 HOH A 46 946 50 HOH HOH . G 5 HOH A 47 947 137 HOH HOH . G 5 HOH A 48 948 144 HOH HOH . G 5 HOH A 49 949 49 HOH HOH . G 5 HOH A 50 950 21 HOH HOH . G 5 HOH A 51 951 43 HOH HOH . G 5 HOH A 52 952 103 HOH HOH . G 5 HOH A 53 953 36 HOH HOH . G 5 HOH A 54 954 22 HOH HOH . G 5 HOH A 55 955 57 HOH HOH . G 5 HOH A 56 956 122 HOH HOH . G 5 HOH A 57 957 13 HOH HOH . G 5 HOH A 58 958 129 HOH HOH . G 5 HOH A 59 959 3 HOH HOH . G 5 HOH A 60 960 20 HOH HOH . G 5 HOH A 61 961 88 HOH HOH . G 5 HOH A 62 962 55 HOH HOH . G 5 HOH A 63 963 84 HOH HOH . G 5 HOH A 64 964 94 HOH HOH . G 5 HOH A 65 965 110 HOH HOH . G 5 HOH A 66 966 67 HOH HOH . G 5 HOH A 67 967 118 HOH HOH . G 5 HOH A 68 968 65 HOH HOH . G 5 HOH A 69 969 113 HOH HOH . G 5 HOH A 70 970 107 HOH HOH . G 5 HOH A 71 971 60 HOH HOH . G 5 HOH A 72 972 76 HOH HOH . G 5 HOH A 73 973 120 HOH HOH . G 5 HOH A 74 974 128 HOH HOH . G 5 HOH A 75 975 139 HOH HOH . G 5 HOH A 76 976 8 HOH HOH . G 5 HOH A 77 977 69 HOH HOH . G 5 HOH A 78 978 121 HOH HOH . G 5 HOH A 79 979 23 HOH HOH . G 5 HOH A 80 980 142 HOH HOH . G 5 HOH A 81 981 141 HOH HOH . G 5 HOH A 82 982 145 HOH HOH . G 5 HOH A 83 983 54 HOH HOH . G 5 HOH A 84 984 37 HOH HOH . G 5 HOH A 85 985 90 HOH HOH . G 5 HOH A 86 986 146 HOH HOH . G 5 HOH A 87 987 85 HOH HOH . G 5 HOH A 88 988 72 HOH HOH . G 5 HOH A 89 989 133 HOH HOH . G 5 HOH A 90 990 81 HOH HOH . G 5 HOH A 91 991 45 HOH HOH . G 5 HOH A 92 992 105 HOH HOH . G 5 HOH A 93 993 119 HOH HOH . G 5 HOH A 94 994 98 HOH HOH . G 5 HOH A 95 995 132 HOH HOH . G 5 HOH A 96 996 78 HOH HOH . G 5 HOH A 97 997 147 HOH HOH . G 5 HOH A 98 998 26 HOH HOH . G 5 HOH A 99 999 138 HOH HOH . G 5 HOH A 100 1000 114 HOH HOH . G 5 HOH A 101 1001 130 HOH HOH . G 5 HOH A 102 1002 125 HOH HOH . G 5 HOH A 103 1003 126 HOH HOH . G 5 HOH A 104 1004 80 HOH HOH . G 5 HOH A 105 1005 111 HOH HOH . G 5 HOH A 106 1006 136 HOH HOH . G 5 HOH A 107 1007 28 HOH HOH . G 5 HOH A 108 1008 79 HOH HOH . G 5 HOH A 109 1009 108 HOH HOH . G 5 HOH A 110 1010 143 HOH HOH . G 5 HOH A 111 1011 115 HOH HOH . G 5 HOH A 112 1012 83 HOH HOH . G 5 HOH A 113 1013 135 HOH HOH . G 5 HOH A 114 1014 131 HOH HOH . H 5 HOH B 1 801 74 HOH HOH . H 5 HOH B 2 802 68 HOH HOH . H 5 HOH B 3 803 14 HOH HOH . H 5 HOH B 4 804 39 HOH HOH . H 5 HOH B 5 805 134 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 3 2.873 -34.932 1.849 1 43.06 ? C1 EDO 801 A 1 HETATM 2 O O1 EDO . . . C 3 1.812 -35.438 1.065 1 43.85 ? O1 EDO 801 A 1 HETATM 3 C C2 EDO . . . C 3 2.754 -35.503 3.276 1 43.44 ? C2 EDO 801 A 1 HETATM 4 O O2 EDO . . . C 3 2.851 -36.906 3.22 1 43.7 ? O2 EDO 801 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #