data_5NG2 # _model_server_result.job_id zx3svoXY5Xmu--eplNaYIA _model_server_result.datetime_utc '2024-11-04 20:14:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ng2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 5NG2 # _exptl.entry_id 5NG2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 466.531 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description STAUROSPORINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5NG2 _cell.length_a 96.083 _cell.length_b 96.083 _cell.length_c 202.266 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NG2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # _chem_comp.formula 'C28 H26 N4 O3' _chem_comp.formula_weight 466.531 _chem_comp.id STU _chem_comp.mon_nstd_flag . _chem_comp.name STAUROSPORINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O4 C25 STU sing 294 n n O4 C21 STU sing 295 n n C25 C24 STU sing 296 n n C25 N3 STU sing 297 n n C25 H25 STU sing 298 n n C24 C23 STU sing 299 n n C24 H241 STU sing 300 n n C24 H242 STU sing 301 n n C23 C22 STU sing 302 n n C23 N4 STU sing 303 n n C23 H23 STU sing 304 n n C22 C21 STU sing 305 n n C22 O6 STU sing 306 n n C22 H22 STU sing 307 n n C21 C26 STU sing 308 n n C21 N2 STU sing 309 n n C26 H261 STU sing 310 n n C26 H262 STU sing 311 n n C26 H263 STU sing 312 n n N2 C18 STU sing 313 n y N2 C17 STU sing 314 n y C18 C19 STU doub 315 n y C18 C11 STU sing 316 n y C19 C6 STU sing 317 n y C19 N3 STU sing 318 n y C6 C7 STU doub 319 n y C6 C5 STU sing 320 n y C7 C10 STU sing 321 n y C7 C8 STU sing 322 n n C10 C11 STU doub 323 n y C10 C9 STU sing 324 n n C11 C12 STU sing 325 n y C12 C17 STU doub 326 n y C12 C13 STU sing 327 n y C17 C16 STU sing 328 n y C16 C15 STU doub 329 n y C16 H16 STU sing 330 n n C15 C14 STU sing 331 n y C15 H15 STU sing 332 n n C14 C13 STU doub 333 n y C14 H14 STU sing 334 n n C13 H13 STU sing 335 n n C9 N1 STU sing 336 n n C9 H91 STU sing 337 n n C9 H92 STU sing 338 n n N1 C8 STU sing 339 n n N1 HN1 STU sing 340 n n C8 O5 STU doub 341 n n C5 C20 STU doub 342 n y C5 C4 STU sing 343 n y C20 C1 STU sing 344 n y C20 N3 STU sing 345 n y C1 C2 STU doub 346 n y C1 H1 STU sing 347 n n C2 C3 STU sing 348 n y C2 H2 STU sing 349 n n C3 C4 STU doub 350 n y C3 H3 STU sing 351 n n C4 H4 STU sing 352 n n O6 C27 STU sing 353 n n C27 H271 STU sing 354 n n C27 H272 STU sing 355 n n C27 H273 STU sing 356 n n N4 C28 STU sing 357 n n N4 HN4 STU sing 358 n n C28 H281 STU sing 359 n n C28 H282 STU sing 360 n n C28 H283 STU sing 361 n n # _atom_sites.entry_id 5NG2 _atom_sites.fract_transf_matrix[1][1] 0.010408 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010408 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004944 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 STU A 1 401 2 STU STU . D 3 PO4 A 1 402 2 PO4 PO4 . E 3 PO4 A 1 403 5 PO4 PO4 . F 3 PO4 A 1 404 6 PO4 PO4 . G 2 STU B 1 401 1 STU STU . H 3 PO4 B 1 402 1 PO4 PO4 . I 3 PO4 B 1 403 7 PO4 PO4 . J 3 PO4 B 1 404 8 PO4 PO4 . K 4 HOH A 1 501 48 HOH HOH . K 4 HOH A 2 502 61 HOH HOH . K 4 HOH A 3 503 15 HOH HOH . K 4 HOH A 4 504 52 HOH HOH . K 4 HOH A 5 505 46 HOH HOH . K 4 HOH A 6 506 2 HOH HOH . K 4 HOH A 7 507 4 HOH HOH . K 4 HOH A 8 508 1 HOH HOH . K 4 HOH A 9 509 65 HOH HOH . K 4 HOH A 10 510 62 HOH HOH . K 4 HOH A 11 511 24 HOH HOH . K 4 HOH A 12 512 7 HOH HOH . K 4 HOH A 13 513 68 HOH HOH . K 4 HOH A 14 514 29 HOH HOH . K 4 HOH A 15 515 37 HOH HOH . K 4 HOH A 16 516 41 HOH HOH . K 4 HOH A 17 517 55 HOH HOH . K 4 HOH A 18 518 45 HOH HOH . K 4 HOH A 19 519 58 HOH HOH . K 4 HOH A 20 520 36 HOH HOH . K 4 HOH A 21 521 10 HOH HOH . K 4 HOH A 22 522 28 HOH HOH . K 4 HOH A 23 523 40 HOH HOH . L 4 HOH B 1 501 31 HOH HOH . L 4 HOH B 2 502 63 HOH HOH . L 4 HOH B 3 503 67 HOH HOH . L 4 HOH B 4 504 60 HOH HOH . L 4 HOH B 5 505 66 HOH HOH . L 4 HOH B 6 506 49 HOH HOH . L 4 HOH B 7 507 6 HOH HOH . L 4 HOH B 8 508 27 HOH HOH . L 4 HOH B 9 509 3 HOH HOH . L 4 HOH B 10 510 64 HOH HOH . L 4 HOH B 11 511 5 HOH HOH . L 4 HOH B 12 512 21 HOH HOH . L 4 HOH B 13 513 11 HOH HOH . L 4 HOH B 14 514 16 HOH HOH . L 4 HOH B 15 515 26 HOH HOH . L 4 HOH B 16 516 32 HOH HOH . L 4 HOH B 17 517 20 HOH HOH . L 4 HOH B 18 518 8 HOH HOH . L 4 HOH B 19 519 12 HOH HOH . L 4 HOH B 20 520 44 HOH HOH . L 4 HOH B 21 521 59 HOH HOH . L 4 HOH B 22 522 17 HOH HOH . L 4 HOH B 23 523 23 HOH HOH . L 4 HOH B 24 524 42 HOH HOH . L 4 HOH B 25 525 56 HOH HOH . L 4 HOH B 26 526 57 HOH HOH . L 4 HOH B 27 527 38 HOH HOH . L 4 HOH B 28 528 14 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O4 STU . . . C 2 35.486 81.134 4.116 1 56.07 ? O4 STU 401 A 1 HETATM 2 C C25 STU . . . C 2 34.5 82.19 4.148 1 55.83 ? C25 STU 401 A 1 HETATM 3 C C24 STU . . . C 2 33.78 82.457 2.825 1 56.99 ? C24 STU 401 A 1 HETATM 4 C C23 STU . . . C 2 34.234 81.435 1.786 1 58.13 ? C23 STU 401 A 1 HETATM 5 C C22 STU . . . C 2 35.77 81.462 1.684 1 57.24 ? C22 STU 401 A 1 HETATM 6 C C21 STU . . . C 2 36.413 81.007 3.022 1 56.34 ? C21 STU 401 A 1 HETATM 7 C C26 STU . . . C 2 36.708 79.503 2.983 1 54.59 ? C26 STU 401 A 1 HETATM 8 N N2 STU . . . C 2 37.662 81.839 3.29 1 56.89 ? N2 STU 401 A 1 HETATM 9 C C18 STU . . . C 2 37.616 83.03 3.971 1 55.49 ? C18 STU 401 A 1 HETATM 10 C C19 STU . . . C 2 36.463 83.751 4.62 1 54.84 ? C19 STU 401 A 1 HETATM 11 C C6 STU . . . C 2 36.706 85.025 5.305 1 54.94 ? C6 STU 401 A 1 HETATM 12 C C7 STU . . . C 2 38.094 85.553 5.324 1 55.32 ? C7 STU 401 A 1 HETATM 13 C C10 STU . . . C 2 39.242 84.889 4.709 1 55.11 ? C10 STU 401 A 1 HETATM 14 C C11 STU . . . C 2 38.982 83.593 4.015 1 55.22 ? C11 STU 401 A 1 HETATM 15 C C12 STU . . . C 2 39.826 82.644 3.291 1 56.04 ? C12 STU 401 A 1 HETATM 16 C C17 STU . . . C 2 38.941 81.529 2.829 1 56.25 ? C17 STU 401 A 1 HETATM 17 C C16 STU . . . C 2 39.578 80.51 2.103 1 56.47 ? C16 STU 401 A 1 HETATM 18 C C15 STU . . . C 2 40.963 80.575 1.861 1 57.44 ? C15 STU 401 A 1 HETATM 19 C C14 STU . . . C 2 41.765 81.642 2.308 1 57.08 ? C14 STU 401 A 1 HETATM 20 C C13 STU . . . C 2 41.2 82.697 3.035 1 57.02 ? C13 STU 401 A 1 HETATM 21 C C9 STU . . . C 2 40.452 85.673 4.913 1 55.45 ? C9 STU 401 A 1 HETATM 22 N N1 STU . . . C 2 40.005 86.87 5.684 1 56.03 ? N1 STU 401 A 1 HETATM 23 C C8 STU . . . C 2 38.668 86.78 5.911 1 55.66 ? C8 STU 401 A 1 HETATM 24 O O5 STU . . . C 2 37.994 87.659 6.56 1 54.38 ? O5 STU 401 A 1 HETATM 25 C C5 STU . . . C 2 35.407 85.436 5.809 1 56.25 ? C5 STU 401 A 1 HETATM 26 C C20 STU . . . C 2 34.447 84.373 5.393 1 56.57 ? C20 STU 401 A 1 HETATM 27 C C1 STU . . . C 2 33.106 84.549 5.769 1 58.01 ? C1 STU 401 A 1 HETATM 28 C C2 STU . . . C 2 32.726 85.687 6.503 1 58.66 ? C2 STU 401 A 1 HETATM 29 C C3 STU . . . C 2 33.662 86.67 6.877 1 58.9 ? C3 STU 401 A 1 HETATM 30 C C4 STU . . . C 2 35.022 86.56 6.534 1 57.25 ? C4 STU 401 A 1 HETATM 31 N N3 STU . . . C 2 35.14 83.414 4.69 1 55.41 ? N3 STU 401 A 1 HETATM 32 O O6 STU . . . C 2 36.146 82.802 1.322 1 57.52 ? O6 STU 401 A 1 HETATM 33 C C27 STU . . . C 2 37.166 82.916 0.329 1 59.96 ? C27 STU 401 A 1 HETATM 34 N N4 STU . . . C 2 33.54 81.645 0.526 1 58.36 ? N4 STU 401 A 1 HETATM 35 C C28 STU . . . C 2 32.191 81.132 0.332 1 57.33 ? C28 STU 401 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 250 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 35 #