data_5NG2 # _model_server_result.job_id r2TcWhY3vrAHVVg2YNhO8g _model_server_result.datetime_utc '2024-11-04 20:18:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ng2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":402}' # _entry.id 5NG2 # _exptl.entry_id 5NG2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5NG2 _cell.length_a 96.083 _cell.length_b 96.083 _cell.length_c 202.266 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NG2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 H N N ? 3 I N N ? 3 J N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 5NG2 _atom_sites.fract_transf_matrix[1][1] 0.010408 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010408 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004944 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 STU A 1 401 2 STU STU . D 3 PO4 A 1 402 2 PO4 PO4 . E 3 PO4 A 1 403 5 PO4 PO4 . F 3 PO4 A 1 404 6 PO4 PO4 . G 2 STU B 1 401 1 STU STU . H 3 PO4 B 1 402 1 PO4 PO4 . I 3 PO4 B 1 403 7 PO4 PO4 . J 3 PO4 B 1 404 8 PO4 PO4 . K 4 HOH A 1 501 48 HOH HOH . K 4 HOH A 2 502 61 HOH HOH . K 4 HOH A 3 503 15 HOH HOH . K 4 HOH A 4 504 52 HOH HOH . K 4 HOH A 5 505 46 HOH HOH . K 4 HOH A 6 506 2 HOH HOH . K 4 HOH A 7 507 4 HOH HOH . K 4 HOH A 8 508 1 HOH HOH . K 4 HOH A 9 509 65 HOH HOH . K 4 HOH A 10 510 62 HOH HOH . K 4 HOH A 11 511 24 HOH HOH . K 4 HOH A 12 512 7 HOH HOH . K 4 HOH A 13 513 68 HOH HOH . K 4 HOH A 14 514 29 HOH HOH . K 4 HOH A 15 515 37 HOH HOH . K 4 HOH A 16 516 41 HOH HOH . K 4 HOH A 17 517 55 HOH HOH . K 4 HOH A 18 518 45 HOH HOH . K 4 HOH A 19 519 58 HOH HOH . K 4 HOH A 20 520 36 HOH HOH . K 4 HOH A 21 521 10 HOH HOH . K 4 HOH A 22 522 28 HOH HOH . K 4 HOH A 23 523 40 HOH HOH . L 4 HOH B 1 501 31 HOH HOH . L 4 HOH B 2 502 63 HOH HOH . L 4 HOH B 3 503 67 HOH HOH . L 4 HOH B 4 504 60 HOH HOH . L 4 HOH B 5 505 66 HOH HOH . L 4 HOH B 6 506 49 HOH HOH . L 4 HOH B 7 507 6 HOH HOH . L 4 HOH B 8 508 27 HOH HOH . L 4 HOH B 9 509 3 HOH HOH . L 4 HOH B 10 510 64 HOH HOH . L 4 HOH B 11 511 5 HOH HOH . L 4 HOH B 12 512 21 HOH HOH . L 4 HOH B 13 513 11 HOH HOH . L 4 HOH B 14 514 16 HOH HOH . L 4 HOH B 15 515 26 HOH HOH . L 4 HOH B 16 516 32 HOH HOH . L 4 HOH B 17 517 20 HOH HOH . L 4 HOH B 18 518 8 HOH HOH . L 4 HOH B 19 519 12 HOH HOH . L 4 HOH B 20 520 44 HOH HOH . L 4 HOH B 21 521 59 HOH HOH . L 4 HOH B 22 522 17 HOH HOH . L 4 HOH B 23 523 23 HOH HOH . L 4 HOH B 24 524 42 HOH HOH . L 4 HOH B 25 525 56 HOH HOH . L 4 HOH B 26 526 57 HOH HOH . L 4 HOH B 27 527 38 HOH HOH . L 4 HOH B 28 528 14 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . H 3 45.636 114.328 33.981 1 85.3 ? P PO4 402 B 1 HETATM 2 O O1 PO4 . . . H 3 45.12 115.061 32.768 1 82.96 ? O1 PO4 402 B 1 HETATM 3 O O2 PO4 . . . H 3 47.055 113.869 33.737 1 83.63 ? O2 PO4 402 B 1 HETATM 4 O O3 PO4 . . . H 3 44.736 113.139 34.238 1 83.78 ? O3 PO4 402 B 1 HETATM 5 O O4 PO4 . . . H 3 45.611 115.25 35.177 1 80.37 ? O4 PO4 402 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #