data_5NG3 # _model_server_result.job_id b92STgl7cVVL0iF1sh3n6w _model_server_result.datetime_utc '2024-11-04 20:51:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ng3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":402}' # _entry.id 5NG3 # _exptl.entry_id 5NG3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 22 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5NG3 _cell.length_a 77.022 _cell.length_b 103.31 _cell.length_c 204.299 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NG3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,H,I,J,AA 1 1 B,K,L,M,N,O,P,Q,BA 2 1 C,R,S,T,U,CA 3 1 D,V,W,X,Y,Z,DA 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 X N N ? 3 Y N N ? 3 Z N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LYS 114 D LYS 110 1_555 A N TPO 115 D TPO 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 A C TPO 115 D TPO 111 1_555 A N GLU 116 D GLU 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale3 C C LYS 114 A LYS 110 1_555 C N TPO 115 A TPO 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale4 C C TPO 115 A TPO 111 1_555 C N GLU 116 A GLU 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 5NG3 _atom_sites.fract_transf_matrix[1][1] 0.012983 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00968 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004895 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SO4 D 1 401 3 SO4 SO4 . F 3 SO4 D 1 402 7 SO4 SO4 . G 3 SO4 D 1 403 8 SO4 SO4 . H 3 SO4 D 1 404 9 SO4 SO4 . I 3 SO4 D 1 405 10 SO4 SO4 . J 3 SO4 D 1 406 22 SO4 SO4 . K 3 SO4 B 1 401 1 SO4 SO4 . L 3 SO4 B 1 402 11 SO4 SO4 . M 3 SO4 B 1 403 12 SO4 SO4 . N 3 SO4 B 1 404 14 SO4 SO4 . O 3 SO4 B 1 405 19 SO4 SO4 . P 3 SO4 B 1 406 24 SO4 SO4 . Q 3 SO4 B 1 407 30 SO4 SO4 . R 3 SO4 A 1 401 2 SO4 SO4 . S 3 SO4 A 1 402 6 SO4 SO4 . T 3 SO4 A 1 403 18 SO4 SO4 . U 3 SO4 A 1 404 29 SO4 SO4 . V 3 SO4 C 1 401 4 SO4 SO4 . W 3 SO4 C 1 402 5 SO4 SO4 . X 3 SO4 C 1 403 13 SO4 SO4 . Y 3 SO4 C 1 404 15 SO4 SO4 . Z 3 SO4 C 1 405 16 SO4 SO4 . AA 4 HOH D 1 501 62 HOH HOH . AA 4 HOH D 2 502 13 HOH HOH . AA 4 HOH D 3 503 38 HOH HOH . AA 4 HOH D 4 504 95 HOH HOH . AA 4 HOH D 5 505 6 HOH HOH . AA 4 HOH D 6 506 71 HOH HOH . AA 4 HOH D 7 507 94 HOH HOH . AA 4 HOH D 8 508 81 HOH HOH . AA 4 HOH D 9 509 48 HOH HOH . AA 4 HOH D 10 510 80 HOH HOH . AA 4 HOH D 11 511 46 HOH HOH . AA 4 HOH D 12 512 92 HOH HOH . AA 4 HOH D 13 513 18 HOH HOH . AA 4 HOH D 14 514 50 HOH HOH . AA 4 HOH D 15 515 56 HOH HOH . BA 4 HOH B 1 501 41 HOH HOH . BA 4 HOH B 2 502 90 HOH HOH . BA 4 HOH B 3 503 93 HOH HOH . BA 4 HOH B 4 504 87 HOH HOH . BA 4 HOH B 5 505 4 HOH HOH . BA 4 HOH B 6 506 75 HOH HOH . BA 4 HOH B 7 507 53 HOH HOH . BA 4 HOH B 8 508 29 HOH HOH . BA 4 HOH B 9 509 42 HOH HOH . BA 4 HOH B 10 510 19 HOH HOH . BA 4 HOH B 11 511 98 HOH HOH . BA 4 HOH B 12 512 57 HOH HOH . CA 4 HOH A 1 501 96 HOH HOH . CA 4 HOH A 2 502 40 HOH HOH . CA 4 HOH A 3 503 39 HOH HOH . CA 4 HOH A 4 504 84 HOH HOH . CA 4 HOH A 5 505 58 HOH HOH . CA 4 HOH A 6 506 34 HOH HOH . CA 4 HOH A 7 507 59 HOH HOH . CA 4 HOH A 8 508 79 HOH HOH . CA 4 HOH A 9 509 24 HOH HOH . CA 4 HOH A 10 510 61 HOH HOH . CA 4 HOH A 11 511 21 HOH HOH . CA 4 HOH A 12 512 47 HOH HOH . CA 4 HOH A 13 513 74 HOH HOH . DA 4 HOH C 1 501 14 HOH HOH . DA 4 HOH C 2 502 11 HOH HOH . DA 4 HOH C 3 503 20 HOH HOH . DA 4 HOH C 4 504 3 HOH HOH . DA 4 HOH C 5 505 78 HOH HOH . DA 4 HOH C 6 506 70 HOH HOH . DA 4 HOH C 7 507 89 HOH HOH . DA 4 HOH C 8 508 64 HOH HOH . DA 4 HOH C 9 509 63 HOH HOH . DA 4 HOH C 10 510 65 HOH HOH . DA 4 HOH C 11 511 60 HOH HOH . DA 4 HOH C 12 512 52 HOH HOH . DA 4 HOH C 13 513 77 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . S 3 4.293 28.504 -57.499 1 91.47 ? S SO4 402 A 1 HETATM 2 O O1 SO4 . . . S 3 5.312 29.336 -58.193 1 78.16 ? O1 SO4 402 A 1 HETATM 3 O O2 SO4 . . . S 3 2.93 28.901 -57.952 1 86.12 -1 O2 SO4 402 A 1 HETATM 4 O O3 SO4 . . . S 3 4.487 27.054 -57.773 1 86.18 ? O3 SO4 402 A 1 HETATM 5 O O4 SO4 . . . S 3 4.44 28.699 -56.035 1 92.34 ? O4 SO4 402 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #