data_5NG5
#
_model_server_result.job_id            Ziqlu0Fl1ZvSh6yeoXhOvA 
_model_server_result.datetime_utc      '2024-11-22 12:03:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ng5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"R","auth_seq_id":1101}' 
#
_entry.id    5NG5 
#
_exptl.entry_id    5NG5 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              526.691 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            6-[2-(3,4-dimethoxyphenyl)ethylsulfanyl]-8-[4-(2-methoxyethyl)piperazin-1-yl]-3,3-dimethyl-1,4-dihydropyrano[3,4-c]pyridine-5-carbonitrile 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    pentadecameric 
_pdbx_struct_assembly.oligomeric_count      15 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 P N N 
? 5 Q N N 
? 5 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 J CE1 PHE 628 K PHE 628 1_555 P C33 5QF . K 5QF 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.42 ? 
covale ? covale2 J CZ PHE 628 K PHE 628 1_555 P C1 5QF . K 5QF 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.261 ? 
covale ? covale3 J CZ PHE 628 K PHE 628 1_555 P C2 5QF . K 5QF 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.277 ? 
covale ? covale4 K CD2 PHE 178 L PHE 178 1_555 Q C11 5QF . L 5QF 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.645 ? 
covale ? covale5 K CE2 PHE 610 L PHE 610 1_555 Q S9 5QF . L 5QF 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.864 ? 
covale ? covale6 K CE2 PHE 628 L PHE 628 1_555 Q C1 5QF . L 5QF 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.357 ? 
covale ? covale7 K CE2 PHE 628 L PHE 628 1_555 Q C6 5QF . L 5QF 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.203 ? 
covale ? covale8 K CZ PHE 628 L PHE 628 1_555 Q C2 5QF . L 5QF 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.613 ? 
#
_chem_comp.formula           'C28 H38 N4 O4 S' 
_chem_comp.formula_weight    526.691 
_chem_comp.id                5QF 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              6-[2-(3,4-dimethoxyphenyl)ethylsulfanyl]-8-[4-(2-methoxyethyl)piperazin-1-yl]-3,3-dimethyl-1,4-dihydropyrano[3,4-c]pyridine-5-carbonitrile 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5NG5 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
P 5 5QF K 1 1101 901 5QF 5QF . 
Q 5 5QF L 1 1101 901 5QF 5QF . 
R 5 5QF J 1 1101 901 5QF 5QF . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 5QF . . . R 5 228.641 189.664 122.834 1 22.88 ? C1 5QF 1101 J 1 
HETATM 2 C C2 5QF . . . R 5 227.479 189.181 123.3 1 22.63 ? C2 5QF 1101 J 1 
HETATM 3 C C3 5QF . . . R 5 226.975 189.658 124.529 1 24.38 ? C3 5QF 1101 J 1 
HETATM 4 N N4 5QF . . . R 5 227.655 190.58 125.216 1 19.06 ? N4 5QF 1101 J 1 
HETATM 5 C C5 5QF . . . R 5 228.821 191.054 124.734 1 17.92 ? C5 5QF 1101 J 1 
HETATM 6 C C6 5QF . . . R 5 229.323 190.609 123.542 1 21.39 ? C6 5QF 1101 J 1 
HETATM 7 C C7 5QF . . . R 5 230.625 191.225 123.107 1 25.13 ? C7 5QF 1101 J 1 
HETATM 8 N N8 5QF . . . R 5 231.598 191.716 122.815 1 24.73 ? N8 5QF 1101 J 1 
HETATM 9 S S9 5QF . . . R 5 229.718 192.335 125.651 1 22.03 ? S9 5QF 1101 J 1 
HETATM 10 C C10 5QF . . . R 5 228.862 192.321 127.236 1 23.46 ? C10 5QF 1101 J 1 
HETATM 11 C C11 5QF . . . R 5 229.121 193.567 128.104 1 24.51 ? C11 5QF 1101 J 1 
HETATM 12 C C12 5QF . . . R 5 228.946 193.23 129.589 1 24.73 ? C12 5QF 1101 J 1 
HETATM 13 C C13 5QF . . . R 5 229.49 194.052 130.538 1 22.96 ? C13 5QF 1101 J 1 
HETATM 14 C C14 5QF . . . R 5 229.315 193.736 131.87 1 20.62 ? C14 5QF 1101 J 1 
HETATM 15 C C15 5QF . . . R 5 228.602 192.623 132.236 1 24.96 ? C15 5QF 1101 J 1 
HETATM 16 C C16 5QF . . . R 5 228.042 191.805 131.286 1 28.6 ? C16 5QF 1101 J 1 
HETATM 17 C C17 5QF . . . R 5 228.225 192.129 129.991 1 25.53 ? C17 5QF 1101 J 1 
HETATM 18 O O18 5QF . . . R 5 227.31 190.64 131.568 1 45.42 ? O18 5QF 1101 J 1 
HETATM 19 O O19 5QF . . . R 5 228.461 192.343 133.587 1 29.64 ? O19 5QF 1101 J 1 
HETATM 20 C C20 5QF . . . R 5 226.064 190.43 130.938 1 46.69 ? C20 5QF 1101 J 1 
HETATM 21 C C21 5QF . . . R 5 227.373 192.991 134.138 1 30.12 ? C21 5QF 1101 J 1 
HETATM 22 N N22 5QF . . . R 5 225.71 189.147 125.11 1 37.4 ? N22 5QF 1101 J 1 
HETATM 23 C C23 5QF . . . R 5 224.529 189.725 124.541 1 50.6 ? C23 5QF 1101 J 1 
HETATM 24 C C24 5QF . . . R 5 223.334 188.875 124.944 1 51.79 ? C24 5QF 1101 J 1 
HETATM 25 N N25 5QF . . . R 5 223.254 188.638 126.387 1 49.2 ? N25 5QF 1101 J 1 
HETATM 26 C C26 5QF . . . R 5 224.56 188.336 126.966 1 48.18 ? C26 5QF 1101 J 1 
HETATM 27 C C27 5QF . . . R 5 225.67 189.275 126.541 1 43.7 ? C27 5QF 1101 J 1 
HETATM 28 C C28 5QF . . . R 5 222.586 189.758 127.108 1 47.05 ? C28 5QF 1101 J 1 
HETATM 29 C C29 5QF . . . R 5 222.065 189.349 128.519 1 44.24 ? C29 5QF 1101 J 1 
HETATM 30 O O30 5QF . . . R 5 223.048 189.628 129.487 1 45.79 ? O30 5QF 1101 J 1 
HETATM 31 C C31 5QF . . . R 5 222.58 189.733 130.812 1 40.15 ? C31 5QF 1101 J 1 
HETATM 32 C C32 5QF . . . R 5 229.133 189.133 121.515 1 27.71 ? C32 5QF 1101 J 1 
HETATM 33 C C33 5QF . . . R 5 228.119 188.512 120.631 1 32.36 ? C33 5QF 1101 J 1 
HETATM 34 O O34 5QF . . . R 5 227.344 187.534 121.327 1 27.53 ? O34 5QF 1101 J 1 
HETATM 35 C C35 5QF . . . R 5 226.72 188.083 122.475 1 23.33 ? C35 5QF 1101 J 1 
HETATM 36 C C36 5QF . . . R 5 228.894 187.859 119.479 1 39.81 ? C36 5QF 1101 J 1 
HETATM 37 C C37 5QF . . . R 5 227.203 189.576 120.044 1 36.39 ? C37 5QF 1101 J 1 
HETATM 38 H H1 5QF . . . R 5 227.904 192.258 127.116 1 23.46 ? H1 5QF 1101 J 1 
HETATM 39 H H2 5QF . . . R 5 229.18 191.502 127.627 1 23.46 ? H2 5QF 1101 J 1 
HETATM 40 H H3 5QF . . . R 5 230.011 193.904 127.951 1 24.51 ? H3 5QF 1101 J 1 
HETATM 41 H H4 5QF . . . R 5 228.476 194.257 127.886 1 24.51 ? H4 5QF 1101 J 1 
HETATM 42 H H5 5QF . . . R 5 229.973 194.805 130.291 1 22.96 ? H5 5QF 1101 J 1 
HETATM 43 H H6 5QF . . . R 5 229.676 194.275 132.532 1 20.62 ? H6 5QF 1101 J 1 
HETATM 44 H H7 5QF . . . R 5 227.852 191.559 129.371 1 25.53 ? H7 5QF 1101 J 1 
HETATM 45 H H8 5QF . . . R 5 225.696 189.589 131.248 1 46.69 ? H8 5QF 1101 J 1 
HETATM 46 H H9 5QF . . . R 5 226.142 190.384 129.968 1 46.69 ? H9 5QF 1101 J 1 
HETATM 47 H H10 5QF . . . R 5 225.459 191.135 131.207 1 46.69 ? H10 5QF 1101 J 1 
HETATM 48 H H11 5QF . . . R 5 226.57 192.754 133.651 1 30.12 ? H11 5QF 1101 J 1 
HETATM 49 H H12 5QF . . . R 5 227.287 192.742 135.067 1 30.12 ? H12 5QF 1101 J 1 
HETATM 50 H H13 5QF . . . R 5 227.556 193.93 134.056 1 30.12 ? H13 5QF 1101 J 1 
HETATM 51 H H14 5QF . . . R 5 224.614 189.719 123.583 1 50.6 ? H14 5QF 1101 J 1 
HETATM 52 H H15 5QF . . . R 5 224.413 190.624 124.875 1 50.6 ? H15 5QF 1101 J 1 
HETATM 53 H H16 5QF . . . R 5 223.424 188.023 124.495 1 51.79 ? H16 5QF 1101 J 1 
HETATM 54 H H17 5QF . . . R 5 222.538 189.32 124.621 1 51.79 ? H17 5QF 1101 J 1 
HETATM 55 H H19 5QF . . . R 5 224.828 187.471 126.636 1 48.18 ? H19 5QF 1101 J 1 
HETATM 56 H H20 5QF . . . R 5 224.527 188.319 127.929 1 48.18 ? H20 5QF 1101 J 1 
HETATM 57 H H21 5QF . . . R 5 225.483 190.184 126.817 1 43.7 ? H21 5QF 1101 J 1 
HETATM 58 H H22 5QF . . . R 5 226.5 188.964 126.921 1 43.7 ? H22 5QF 1101 J 1 
HETATM 59 H H23 5QF . . . R 5 223.229 190.463 127.198 1 47.05 ? H23 5QF 1101 J 1 
HETATM 60 H H24 5QF . . . R 5 221.828 190.09 126.607 1 47.05 ? H24 5QF 1101 J 1 
HETATM 61 H H25 5QF . . . R 5 221.258 189.857 128.702 1 44.24 ? H25 5QF 1101 J 1 
HETATM 62 H H26 5QF . . . R 5 221.871 188.402 128.544 1 44.24 ? H26 5QF 1101 J 1 
HETATM 63 H H27 5QF . . . R 5 222.259 188.863 131.104 1 40.15 ? H27 5QF 1101 J 1 
HETATM 64 H H28 5QF . . . R 5 221.861 190.379 130.855 1 40.15 ? H28 5QF 1101 J 1 
HETATM 65 H H29 5QF . . . R 5 223.305 190.028 131.387 1 40.15 ? H29 5QF 1101 J 1 
HETATM 66 H H30 5QF . . . R 5 229.534 189.855 121.02 1 27.71 ? H30 5QF 1101 J 1 
HETATM 67 H H31 5QF . . . R 5 229.801 188.463 121.71 1 27.71 ? H31 5QF 1101 J 1 
HETATM 68 H H32 5QF . . . R 5 225.878 188.449 122.19 1 23.33 ? H32 5QF 1101 J 1 
HETATM 69 H H33 5QF . . . R 5 226.546 187.357 123.084 1 23.33 ? H33 5QF 1101 J 1 
HETATM 70 H H34 5QF . . . R 5 228.299 187.709 118.732 1 39.81 ? H34 5QF 1101 J 1 
HETATM 71 H H35 5QF . . . R 5 229.606 188.451 119.203 1 39.81 ? H35 5QF 1101 J 1 
HETATM 72 H H36 5QF . . . R 5 229.27 187.017 119.777 1 39.81 ? H36 5QF 1101 J 1 
HETATM 73 H H37 5QF . . . R 5 227.104 190.311 120.658 1 36.39 ? H37 5QF 1101 J 1 
HETATM 74 H H38 5QF . . . R 5 226.333 189.182 119.892 1 36.39 ? H38 5QF 1101 J 1 
HETATM 75 H H39 5QF . . . R 5 227.577 189.899 119.21 1 36.39 ? H39 5QF 1101 J 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    66 
_model_server_stats.query_time_ms           241 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           75 
#