data_5NHJ # _model_server_result.job_id sTuTjk-_p7FXW97NTt5wuw _model_server_result.datetime_utc '2024-12-22 01:45:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5nhj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 5NHJ # _exptl.entry_id 5NHJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 367.405 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-(2-methoxyethyl)-2-[2-[(2-methylpyrazol-3-yl)amino]pyrimidin-4-yl]-6,7-dihydro-1~{H}-pyrrolo[3,2-c]pyridin-4-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.03 _cell.angle_gamma 90 _cell.entry_id 5NHJ _cell.length_a 49.025 _cell.length_b 71.158 _cell.length_c 61.398 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NHJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H21 N7 O2' _chem_comp.formula_weight 367.405 _chem_comp.id 8XE _chem_comp.mon_nstd_flag . _chem_comp.name 5-(2-methoxyethyl)-2-[2-[(2-methylpyrazol-3-yl)amino]pyrimidin-4-yl]-6,7-dihydro-1~{H}-pyrrolo[3,2-c]pyridin-4-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 O1 8XE sing 1 n n O1 C16 8XE sing 2 n n C16 C15 8XE sing 3 n n O C14 8XE doub 4 n n C9 C10 8XE sing 5 n y C9 C8 8XE doub 6 n y C14 C10 8XE sing 7 n n C14 N6 8XE sing 8 n n C6 C5 8XE doub 9 n y C6 C7 8XE sing 10 n y C15 N6 8XE sing 11 n n C5 N3 8XE sing 12 n y C10 C11 8XE doub 13 n y N6 C13 8XE sing 14 n n C8 C7 8XE sing 15 n n C8 N5 8XE sing 16 n y C7 N4 8XE doub 17 n y N3 C4 8XE doub 18 n y C13 C12 8XE sing 19 n n C11 N5 8XE sing 20 n y C11 C12 8XE sing 21 n n N4 C4 8XE sing 22 n y C4 N2 8XE sing 23 n n N2 C1 8XE sing 24 n n C N 8XE sing 25 n n C1 N 8XE sing 26 n y C1 C2 8XE doub 27 n y N N1 8XE sing 28 n y C2 C3 8XE sing 29 n y N1 C3 8XE doub 30 n y C2 H1 8XE sing 31 n n C3 H2 8XE sing 32 n n C9 H3 8XE sing 33 n n C12 H4 8XE sing 34 n n C12 H5 8XE sing 35 n n C13 H6 8XE sing 36 n n C13 H7 8XE sing 37 n n C15 H8 8XE sing 38 n n C15 H9 8XE sing 39 n n C16 H10 8XE sing 40 n n C16 H11 8XE sing 41 n n C17 H12 8XE sing 42 n n C17 H13 8XE sing 43 n n C17 H14 8XE sing 44 n n N5 H15 8XE sing 45 n n C6 H16 8XE sing 46 n n C5 H17 8XE sing 47 n n N2 H18 8XE sing 48 n n C H19 8XE sing 49 n n C H20 8XE sing 50 n n C H21 8XE sing 51 n n # _atom_sites.entry_id 5NHJ _atom_sites.fract_transf_matrix[1][1] 0.020398 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008254 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014053 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01757 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 401 1 SO4 SO4 . C 2 SO4 A 1 402 2 SO4 SO4 . D 3 8XE A 1 403 1 8XE INH . E 4 HOH A 1 501 156 HOH HOH . E 4 HOH A 2 502 186 HOH HOH . E 4 HOH A 3 503 88 HOH HOH . E 4 HOH A 4 504 138 HOH HOH . E 4 HOH A 5 505 177 HOH HOH . E 4 HOH A 6 506 5 HOH HOH . E 4 HOH A 7 507 188 HOH HOH . E 4 HOH A 8 508 51 HOH HOH . E 4 HOH A 9 509 86 HOH HOH . E 4 HOH A 10 510 154 HOH HOH . E 4 HOH A 11 511 15 HOH HOH . E 4 HOH A 12 512 82 HOH HOH . E 4 HOH A 13 513 175 HOH HOH . E 4 HOH A 14 514 163 HOH HOH . E 4 HOH A 15 515 65 HOH HOH . E 4 HOH A 16 516 182 HOH HOH . E 4 HOH A 17 517 90 HOH HOH . E 4 HOH A 18 518 104 HOH HOH . E 4 HOH A 19 519 27 HOH HOH . E 4 HOH A 20 520 49 HOH HOH . E 4 HOH A 21 521 116 HOH HOH . E 4 HOH A 22 522 41 HOH HOH . E 4 HOH A 23 523 59 HOH HOH . E 4 HOH A 24 524 185 HOH HOH . E 4 HOH A 25 525 101 HOH HOH . E 4 HOH A 26 526 111 HOH HOH . E 4 HOH A 27 527 169 HOH HOH . E 4 HOH A 28 528 180 HOH HOH . E 4 HOH A 29 529 19 HOH HOH . E 4 HOH A 30 530 155 HOH HOH . E 4 HOH A 31 531 92 HOH HOH . E 4 HOH A 32 532 170 HOH HOH . E 4 HOH A 33 533 189 HOH HOH . E 4 HOH A 34 534 179 HOH HOH . E 4 HOH A 35 535 38 HOH HOH . E 4 HOH A 36 536 57 HOH HOH . E 4 HOH A 37 537 123 HOH HOH . E 4 HOH A 38 538 63 HOH HOH . E 4 HOH A 39 539 162 HOH HOH . E 4 HOH A 40 540 20 HOH HOH . E 4 HOH A 41 541 157 HOH HOH . E 4 HOH A 42 542 139 HOH HOH . E 4 HOH A 43 543 102 HOH HOH . E 4 HOH A 44 544 39 HOH HOH . E 4 HOH A 45 545 69 HOH HOH . E 4 HOH A 46 546 176 HOH HOH . E 4 HOH A 47 547 46 HOH HOH . E 4 HOH A 48 548 68 HOH HOH . E 4 HOH A 49 549 43 HOH HOH . E 4 HOH A 50 550 197 HOH HOH . E 4 HOH A 51 551 106 HOH HOH . E 4 HOH A 52 552 178 HOH HOH . E 4 HOH A 53 553 7 HOH HOH . E 4 HOH A 54 554 191 HOH HOH . E 4 HOH A 55 555 36 HOH HOH . E 4 HOH A 56 556 131 HOH HOH . E 4 HOH A 57 557 58 HOH HOH . E 4 HOH A 58 558 115 HOH HOH . E 4 HOH A 59 559 44 HOH HOH . E 4 HOH A 60 560 32 HOH HOH . E 4 HOH A 61 561 25 HOH HOH . E 4 HOH A 62 562 60 HOH HOH . E 4 HOH A 63 563 18 HOH HOH . E 4 HOH A 64 564 194 HOH HOH . E 4 HOH A 65 565 64 HOH HOH . E 4 HOH A 66 566 112 HOH HOH . E 4 HOH A 67 567 164 HOH HOH . E 4 HOH A 68 568 80 HOH HOH . E 4 HOH A 69 569 30 HOH HOH . E 4 HOH A 70 570 53 HOH HOH . E 4 HOH A 71 571 136 HOH HOH . E 4 HOH A 72 572 118 HOH HOH . E 4 HOH A 73 573 81 HOH HOH . E 4 HOH A 74 574 45 HOH HOH . E 4 HOH A 75 575 174 HOH HOH . E 4 HOH A 76 576 35 HOH HOH . E 4 HOH A 77 577 9 HOH HOH . E 4 HOH A 78 578 22 HOH HOH . E 4 HOH A 79 579 168 HOH HOH . E 4 HOH A 80 580 50 HOH HOH . E 4 HOH A 81 581 93 HOH HOH . E 4 HOH A 82 582 99 HOH HOH . E 4 HOH A 83 583 48 HOH HOH . E 4 HOH A 84 584 193 HOH HOH . E 4 HOH A 85 585 61 HOH HOH . E 4 HOH A 86 586 150 HOH HOH . E 4 HOH A 87 587 21 HOH HOH . E 4 HOH A 88 588 66 HOH HOH . E 4 HOH A 89 589 47 HOH HOH . E 4 HOH A 90 590 79 HOH HOH . E 4 HOH A 91 591 152 HOH HOH . E 4 HOH A 92 592 14 HOH HOH . E 4 HOH A 93 593 56 HOH HOH . E 4 HOH A 94 594 24 HOH HOH . E 4 HOH A 95 595 74 HOH HOH . E 4 HOH A 96 596 28 HOH HOH . E 4 HOH A 97 597 84 HOH HOH . E 4 HOH A 98 598 151 HOH HOH . E 4 HOH A 99 599 98 HOH HOH . E 4 HOH A 100 600 134 HOH HOH . E 4 HOH A 101 601 4 HOH HOH . E 4 HOH A 102 602 121 HOH HOH . E 4 HOH A 103 603 72 HOH HOH . E 4 HOH A 104 604 165 HOH HOH . E 4 HOH A 105 605 42 HOH HOH . E 4 HOH A 106 606 89 HOH HOH . E 4 HOH A 107 607 183 HOH HOH . E 4 HOH A 108 608 83 HOH HOH . E 4 HOH A 109 609 196 HOH HOH . E 4 HOH A 110 610 142 HOH HOH . E 4 HOH A 111 611 114 HOH HOH . E 4 HOH A 112 612 166 HOH HOH . E 4 HOH A 113 613 124 HOH HOH . E 4 HOH A 114 614 13 HOH HOH . E 4 HOH A 115 615 132 HOH HOH . E 4 HOH A 116 616 95 HOH HOH . E 4 HOH A 117 617 145 HOH HOH . E 4 HOH A 118 618 143 HOH HOH . E 4 HOH A 119 619 190 HOH HOH . E 4 HOH A 120 620 77 HOH HOH . E 4 HOH A 121 621 140 HOH HOH . E 4 HOH A 122 622 55 HOH HOH . E 4 HOH A 123 623 171 HOH HOH . E 4 HOH A 124 624 128 HOH HOH . E 4 HOH A 125 625 122 HOH HOH . E 4 HOH A 126 626 153 HOH HOH . E 4 HOH A 127 627 184 HOH HOH . E 4 HOH A 128 628 67 HOH HOH . E 4 HOH A 129 629 198 HOH HOH . E 4 HOH A 130 630 192 HOH HOH . E 4 HOH A 131 631 54 HOH HOH . E 4 HOH A 132 632 75 HOH HOH . E 4 HOH A 133 633 17 HOH HOH . E 4 HOH A 134 634 31 HOH HOH . E 4 HOH A 135 635 52 HOH HOH . E 4 HOH A 136 636 108 HOH HOH . E 4 HOH A 137 637 91 HOH HOH . E 4 HOH A 138 638 100 HOH HOH . E 4 HOH A 139 639 40 HOH HOH . E 4 HOH A 140 640 97 HOH HOH . E 4 HOH A 141 641 26 HOH HOH . E 4 HOH A 142 642 144 HOH HOH . E 4 HOH A 143 643 12 HOH HOH . E 4 HOH A 144 644 109 HOH HOH . E 4 HOH A 145 645 37 HOH HOH . E 4 HOH A 146 646 105 HOH HOH . E 4 HOH A 147 647 187 HOH HOH . E 4 HOH A 148 648 146 HOH HOH . E 4 HOH A 149 649 119 HOH HOH . E 4 HOH A 150 650 199 HOH HOH . E 4 HOH A 151 651 161 HOH HOH . E 4 HOH A 152 652 117 HOH HOH . E 4 HOH A 153 653 141 HOH HOH . E 4 HOH A 154 654 130 HOH HOH . E 4 HOH A 155 655 62 HOH HOH . E 4 HOH A 156 656 70 HOH HOH . E 4 HOH A 157 657 33 HOH HOH . E 4 HOH A 158 658 158 HOH HOH . E 4 HOH A 159 659 195 HOH HOH . E 4 HOH A 160 660 135 HOH HOH . E 4 HOH A 161 661 129 HOH HOH . E 4 HOH A 162 662 120 HOH HOH . E 4 HOH A 163 663 96 HOH HOH . E 4 HOH A 164 664 71 HOH HOH . E 4 HOH A 165 665 147 HOH HOH . E 4 HOH A 166 666 159 HOH HOH . E 4 HOH A 167 667 78 HOH HOH . E 4 HOH A 168 668 8 HOH HOH . E 4 HOH A 169 669 160 HOH HOH . E 4 HOH A 170 670 167 HOH HOH . E 4 HOH A 171 671 125 HOH HOH . E 4 HOH A 172 672 107 HOH HOH . E 4 HOH A 173 673 181 HOH HOH . E 4 HOH A 174 674 173 HOH HOH . E 4 HOH A 175 675 137 HOH HOH . E 4 HOH A 176 676 73 HOH HOH . E 4 HOH A 177 677 149 HOH HOH . E 4 HOH A 178 678 133 HOH HOH . E 4 HOH A 179 679 34 HOH HOH . E 4 HOH A 180 680 127 HOH HOH . E 4 HOH A 181 681 103 HOH HOH . E 4 HOH A 182 682 16 HOH HOH . E 4 HOH A 183 683 110 HOH HOH . E 4 HOH A 184 684 148 HOH HOH . E 4 HOH A 185 685 172 HOH HOH . E 4 HOH A 186 686 113 HOH HOH . E 4 HOH A 187 687 126 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 8XE . . . D 3 -20.367 14.487 43.501 1 30.91 ? C1 8XE 403 A 1 HETATM 2 C C2 8XE . . . D 3 -19.314 14.82 44.315 1 31.64 ? C2 8XE 403 A 1 HETATM 3 C C3 8XE . . . D 3 -19.665 16.045 44.856 1 32.7 ? C3 8XE 403 A 1 HETATM 4 N N6 8XE . . . D 3 -11.834 14.118 40.849 1 28.34 ? N6 8XE 403 A 1 HETATM 5 C C7 8XE . . . D 3 -17.609 12.304 41.095 1 26.44 ? C7 8XE 403 A 1 HETATM 6 C C8 8XE . . . D 3 -16.199 12.716 41.091 1 26.41 ? C8 8XE 403 A 1 HETATM 7 C C9 8XE . . . D 3 -15.108 12.322 40.327 1 23.16 ? C9 8XE 403 A 1 HETATM 8 C C10 8XE . . . D 3 -13.985 13.076 40.758 1 25.09 ? C10 8XE 403 A 1 HETATM 9 C C11 8XE . . . D 3 -14.417 13.893 41.77 1 25.67 ? C11 8XE 403 A 1 HETATM 10 C C12 8XE . . . D 3 -13.547 14.85 42.512 1 26.23 ? C12 8XE 403 A 1 HETATM 11 C C13 8XE . . . D 3 -12.406 15.263 41.596 1 27.85 ? C13 8XE 403 A 1 HETATM 12 C C14 8XE . . . D 3 -12.582 13.103 40.331 1 26.95 ? C14 8XE 403 A 1 HETATM 13 C C15 8XE . . . D 3 -10.439 14.35 40.377 1 31.41 ? C15 8XE 403 A 1 HETATM 14 C C16 8XE . . . D 3 -10.283 14.834 38.933 1 35.47 ? C16 8XE 403 A 1 HETATM 15 O O 8XE . . . D 3 -12.103 12.176 39.68 1 27.61 ? O 8XE 403 A 1 HETATM 16 O O1 8XE . . . D 3 -10.878 16.029 38.796 1 40.83 ? O1 8XE 403 A 1 HETATM 17 C C17 8XE . . . D 3 -10.958 16.458 37.434 1 40.78 ? C17 8XE 403 A 1 HETATM 18 N N5 8XE . . . D 3 -15.752 13.686 41.978 1 26.26 ? N5 8XE 403 A 1 HETATM 19 C C6 8XE . . . D 3 -18.076 11.213 40.35 1 29.04 ? C6 8XE 403 A 1 HETATM 20 C C5 8XE . . . D 3 -19.429 10.92 40.452 1 27.79 ? C5 8XE 403 A 1 HETATM 21 N N3 8XE . . . D 3 -20.292 11.623 41.219 1 27.86 ? N3 8XE 403 A 1 HETATM 22 N N4 8XE . . . D 3 -18.422 13.041 41.865 1 26.14 ? N4 8XE 403 A 1 HETATM 23 C C4 8XE . . . D 3 -19.75 12.654 41.891 1 28.27 ? C4 8XE 403 A 1 HETATM 24 N N2 8XE . . . D 3 -20.608 13.392 42.689 1 29.67 ? N2 8XE 403 A 1 HETATM 25 N N1 8XE . . . D 3 -20.853 16.467 44.425 1 33.61 ? N1 8XE 403 A 1 HETATM 26 N N 8XE . . . D 3 -21.277 15.483 43.58 1 32.09 ? N 8XE 403 A 1 HETATM 27 C C 8XE . . . D 3 -22.57 15.621 42.912 1 29.46 ? C 8XE 403 A 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 27 #