data_5NHO # _model_server_result.job_id aD3DbywvYhzhe5UDSogp8g _model_server_result.datetime_utc '2024-12-22 03:21:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5nho # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 5NHO # _exptl.entry_id 5NHO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 395.458 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (6~{S})-5-(2-methoxyethyl)-6-methyl-2-[5-methyl-2-[(2-methylpyrazol-3-yl)amino]pyrimidin-4-yl]-6,7-dihydro-1~{H}-pyrrolo[3,2-c]pyridin-4-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.43 _cell.angle_gamma 90 _cell.entry_id 5NHO _cell.length_a 48.91 _cell.length_b 71.8 _cell.length_c 61.25 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NHO _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H25 N7 O2' _chem_comp.formula_weight 395.458 _chem_comp.id 8XN _chem_comp.mon_nstd_flag . _chem_comp.name (6~{S})-5-(2-methoxyethyl)-6-methyl-2-[5-methyl-2-[(2-methylpyrazol-3-yl)amino]pyrimidin-4-yl]-6,7-dihydro-1~{H}-pyrrolo[3,2-c]pyridin-4-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C14 O1 8XN sing 1 n n O1 C13 8XN sing 2 n n O C11 8XN doub 3 n n C C1 8XN sing 4 n n C13 C12 8XN sing 5 n n C6 C7 8XN sing 6 n y C6 C5 8XN doub 7 n y C11 C7 8XN sing 8 n n C11 N3 8XN sing 9 n n C1 C2 8XN doub 10 n y C1 C4 8XN sing 11 n y C2 N 8XN sing 12 n y C12 N3 8XN sing 13 n n C7 C8 8XN doub 14 n y N3 C10 8XN sing 15 n n C15 C10 8XN sing 16 n n C5 C4 8XN sing 17 n n C5 N2 8XN sing 18 n y C4 N1 8XN doub 19 n y N C3 8XN doub 20 n y C10 C9 8XN sing 21 n n N1 C3 8XN sing 22 n y C8 N2 8XN sing 23 n y C8 C9 8XN sing 24 n n C3 N4 8XN sing 25 n n N4 C16 8XN sing 26 n n C19 N6 8XN sing 27 n n C16 N6 8XN sing 28 n y C16 C17 8XN doub 29 n y N6 N5 8XN sing 30 n y C17 C18 8XN sing 31 n y N5 C18 8XN doub 32 n y C2 H1 8XN sing 33 n n C9 H2 8XN sing 34 n n C9 H3 8XN sing 35 n n C10 H4 8XN sing 36 n n C12 H5 8XN sing 37 n n C12 H6 8XN sing 38 n n C13 H7 8XN sing 39 n n C13 H8 8XN sing 40 n n C14 H9 8XN sing 41 n n C14 H10 8XN sing 42 n n C14 H11 8XN sing 43 n n C15 H12 8XN sing 44 n n C15 H13 8XN sing 45 n n C15 H14 8XN sing 46 n n C19 H15 8XN sing 47 n n C19 H16 8XN sing 48 n n C19 H17 8XN sing 49 n n C6 H18 8XN sing 50 n n N2 H19 8XN sing 51 n n C H20 8XN sing 52 n n C H21 8XN sing 53 n n C H22 8XN sing 54 n n N4 H23 8XN sing 55 n n C18 H24 8XN sing 56 n n C17 H25 8XN sing 57 n n # _atom_sites.entry_id 5NHO _atom_sites.fract_transf_matrix[1][1] 0.020446 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008025 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013928 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017539 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 401 1 SO4 SO4 . C 3 8XN A 1 402 1 8XN INH . D 4 HOH A 1 501 91 HOH HOH . D 4 HOH A 2 502 67 HOH HOH . D 4 HOH A 3 503 43 HOH HOH . D 4 HOH A 4 504 47 HOH HOH . D 4 HOH A 5 505 9 HOH HOH . D 4 HOH A 6 506 6 HOH HOH . D 4 HOH A 7 507 27 HOH HOH . D 4 HOH A 8 508 32 HOH HOH . D 4 HOH A 9 509 92 HOH HOH . D 4 HOH A 10 510 52 HOH HOH . D 4 HOH A 11 511 96 HOH HOH . D 4 HOH A 12 512 33 HOH HOH . D 4 HOH A 13 513 44 HOH HOH . D 4 HOH A 14 514 34 HOH HOH . D 4 HOH A 15 515 73 HOH HOH . D 4 HOH A 16 516 64 HOH HOH . D 4 HOH A 17 517 35 HOH HOH . D 4 HOH A 18 518 46 HOH HOH . D 4 HOH A 19 519 36 HOH HOH . D 4 HOH A 20 520 57 HOH HOH . D 4 HOH A 21 521 55 HOH HOH . D 4 HOH A 22 522 26 HOH HOH . D 4 HOH A 23 523 53 HOH HOH . D 4 HOH A 24 524 72 HOH HOH . D 4 HOH A 25 525 95 HOH HOH . D 4 HOH A 26 526 70 HOH HOH . D 4 HOH A 27 527 42 HOH HOH . D 4 HOH A 28 528 62 HOH HOH . D 4 HOH A 29 529 66 HOH HOH . D 4 HOH A 30 530 7 HOH HOH . D 4 HOH A 31 531 56 HOH HOH . D 4 HOH A 32 532 10 HOH HOH . D 4 HOH A 33 533 93 HOH HOH . D 4 HOH A 34 534 45 HOH HOH . D 4 HOH A 35 535 29 HOH HOH . D 4 HOH A 36 536 15 HOH HOH . D 4 HOH A 37 537 38 HOH HOH . D 4 HOH A 38 538 5 HOH HOH . D 4 HOH A 39 539 40 HOH HOH . D 4 HOH A 40 540 59 HOH HOH . D 4 HOH A 41 541 11 HOH HOH . D 4 HOH A 42 542 37 HOH HOH . D 4 HOH A 43 543 41 HOH HOH . D 4 HOH A 44 544 61 HOH HOH . D 4 HOH A 45 545 84 HOH HOH . D 4 HOH A 46 546 18 HOH HOH . D 4 HOH A 47 547 28 HOH HOH . D 4 HOH A 48 548 94 HOH HOH . D 4 HOH A 49 549 79 HOH HOH . D 4 HOH A 50 550 89 HOH HOH . D 4 HOH A 51 551 48 HOH HOH . D 4 HOH A 52 552 49 HOH HOH . D 4 HOH A 53 553 58 HOH HOH . D 4 HOH A 54 554 75 HOH HOH . D 4 HOH A 55 555 65 HOH HOH . D 4 HOH A 56 556 19 HOH HOH . D 4 HOH A 57 557 54 HOH HOH . D 4 HOH A 58 558 63 HOH HOH . D 4 HOH A 59 559 81 HOH HOH . D 4 HOH A 60 560 25 HOH HOH . D 4 HOH A 61 561 22 HOH HOH . D 4 HOH A 62 562 71 HOH HOH . D 4 HOH A 63 563 12 HOH HOH . D 4 HOH A 64 564 74 HOH HOH . D 4 HOH A 65 565 90 HOH HOH . D 4 HOH A 66 566 78 HOH HOH . D 4 HOH A 67 567 88 HOH HOH . D 4 HOH A 68 568 80 HOH HOH . D 4 HOH A 69 569 51 HOH HOH . D 4 HOH A 70 570 86 HOH HOH . D 4 HOH A 71 571 39 HOH HOH . D 4 HOH A 72 572 85 HOH HOH . D 4 HOH A 73 573 69 HOH HOH . D 4 HOH A 74 574 21 HOH HOH . D 4 HOH A 75 575 23 HOH HOH . D 4 HOH A 76 576 82 HOH HOH . D 4 HOH A 77 577 97 HOH HOH . D 4 HOH A 78 578 77 HOH HOH . D 4 HOH A 79 579 16 HOH HOH . D 4 HOH A 80 580 76 HOH HOH . D 4 HOH A 81 581 31 HOH HOH . D 4 HOH A 82 582 13 HOH HOH . D 4 HOH A 83 583 30 HOH HOH . D 4 HOH A 84 584 50 HOH HOH . D 4 HOH A 85 585 20 HOH HOH . D 4 HOH A 86 586 68 HOH HOH . D 4 HOH A 87 587 24 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 8XN . . . C 3 -17.454 10.998 40.58 1 47.33 ? C1 8XN 402 A 1 HETATM 2 C C2 8XN . . . C 3 -18.802 10.712 40.732 1 48.12 ? C2 8XN 402 A 1 HETATM 3 C C3 8XN . . . C 3 -19.107 12.508 42.076 1 48.89 ? C3 8XN 402 A 1 HETATM 4 N N6 8XN . . . C 3 -20.511 15.362 43.88 1 57.91 ? N6 8XN 402 A 1 HETATM 5 C C7 8XN . . . C 3 -13.42 13.087 40.977 1 48.38 ? C7 8XN 402 A 1 HETATM 6 C C8 8XN . . . C 3 -13.884 13.752 42.075 1 46.57 ? C8 8XN 402 A 1 HETATM 7 C C9 8XN . . . C 3 -13.023 14.653 42.902 1 47.07 ? C9 8XN 402 A 1 HETATM 8 C C10 8XN . . . C 3 -12 15.338 41.951 1 50.96 ? C10 8XN 402 A 1 HETATM 9 C C11 8XN . . . C 3 -12.046 13.226 40.555 1 51.25 ? C11 8XN 402 A 1 HETATM 10 C C12 8XN . . . C 3 -9.942 14.465 40.742 1 53.8 ? C12 8XN 402 A 1 HETATM 11 C C13 8XN . . . C 3 -9.606 15.572 39.764 1 58.19 ? C13 8XN 402 A 1 HETATM 12 C C14 8XN . . . C 3 -10.356 16.431 37.762 1 56.89 ? C14 8XN 402 A 1 HETATM 13 C C15 8XN . . . C 3 -12.722 16.449 41.165 1 50.09 ? C15 8XN 402 A 1 HETATM 14 C C16 8XN . . . C 3 -19.656 14.323 43.748 1 57.05 ? C16 8XN 402 A 1 HETATM 15 C C19 8XN . . . C 3 -21.776 15.621 43.197 1 54.99 ? C19 8XN 402 A 1 HETATM 16 O O 8XN . . . C 3 -11.589 12.491 39.694 1 52.56 ? O 8XN 402 A 1 HETATM 17 C C6 8XN . . . C 3 -14.499 12.354 40.454 1 45 ? C6 8XN 402 A 1 HETATM 18 N N3 8XN . . . C 3 -11.368 14.322 41.053 1 53.27 ? N3 8XN 402 A 1 HETATM 19 O O1 8XN . . . C 3 -10.113 15.279 38.494 1 59.7 ? O1 8XN 402 A 1 HETATM 20 N N2 8XN . . . C 3 -15.198 13.46 42.256 1 43.77 ? N2 8XN 402 A 1 HETATM 21 C C5 8XN . . . C 3 -15.596 12.594 41.258 1 46.36 ? C5 8XN 402 A 1 HETATM 22 C C4 8XN . . . C 3 -16.991 12.137 41.261 1 46.49 ? C4 8XN 402 A 1 HETATM 23 C C 8XN . . . C 3 -16.579 10.106 39.737 1 44.75 ? C 8XN 402 A 1 HETATM 24 N N1 8XN . . . C 3 -17.802 12.897 42.012 1 45.65 ? N1 8XN 402 A 1 HETATM 25 N N 8XN . . . C 3 -19.655 11.445 41.466 1 49.83 ? N 8XN 402 A 1 HETATM 26 N N4 8XN . . . C 3 -19.943 13.292 42.855 1 53.97 ? N4 8XN 402 A 1 HETATM 27 N N5 8XN . . . C 3 -20.055 16.255 44.807 1 59.88 ? N5 8XN 402 A 1 HETATM 28 C C18 8XN . . . C 3 -18.904 15.739 45.23 1 59.01 ? C18 8XN 402 A 1 HETATM 29 C C17 8XN . . . C 3 -18.604 14.54 44.607 1 57.81 ? C17 8XN 402 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 1060 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 29 #