data_5NIE # _model_server_result.job_id 3IIlqVUV5FtVG2UfKVA_7A _model_server_result.datetime_utc '2024-11-30 22:04:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5nie # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":900}' # _entry.id 5NIE # _exptl.entry_id 5NIE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5NIE _cell.length_a 51.97 _cell.length_b 132.15 _cell.length_c 320.12 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NIE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,G 1 1 B,E,H 2 1 C,F,I 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 302 A HIS 295 1_555 D ZN ZN . A ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc2 A NE2 HIS 306 A HIS 299 1_555 D ZN ZN . A ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc3 A OE1 GLU 325 A GLU 318 1_555 D ZN ZN . A ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc4 A OE2 GLU 325 A GLU 318 1_555 D ZN ZN . A ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc5 B NE2 HIS 302 B HIS 295 1_555 E ZN ZN . B ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc6 B NE2 HIS 306 B HIS 299 1_555 E ZN ZN . B ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc7 B OE1 GLU 325 B GLU 318 1_555 E ZN ZN . B ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc8 B OE2 GLU 325 B GLU 318 1_555 E ZN ZN . B ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc9 C NE2 HIS 302 C HIS 295 1_555 F ZN ZN . C ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc10 C NE2 HIS 306 C HIS 299 1_555 F ZN ZN . C ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc11 C OE1 GLU 325 C GLU 318 1_555 F ZN ZN . C ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc12 C OE2 GLU 325 C GLU 318 1_555 F ZN ZN . C ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5NIE _atom_sites.fract_transf_matrix[1][1] 0.019242 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007567 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003124 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 ZN A 1 900 900 ZN ZN . E 2 ZN B 1 900 900 ZN ZN . F 2 ZN C 1 900 900 ZN ZN . G 3 HOH A 1 1001 147 HOH HOH . G 3 HOH A 2 1002 66 HOH HOH . G 3 HOH A 3 1003 34 HOH HOH . G 3 HOH A 4 1004 92 HOH HOH . G 3 HOH A 5 1005 65 HOH HOH . G 3 HOH A 6 1006 17 HOH HOH . G 3 HOH A 7 1007 59 HOH HOH . G 3 HOH A 8 1008 19 HOH HOH . G 3 HOH A 9 1009 22 HOH HOH . G 3 HOH A 10 1010 27 HOH HOH . G 3 HOH A 11 1011 93 HOH HOH . G 3 HOH A 12 1012 69 HOH HOH . G 3 HOH A 13 1013 150 HOH HOH . G 3 HOH A 14 1014 81 HOH HOH . G 3 HOH A 15 1015 9 HOH HOH . G 3 HOH A 16 1016 50 HOH HOH . G 3 HOH A 17 1017 8 HOH HOH . G 3 HOH A 18 1018 112 HOH HOH . G 3 HOH A 19 1019 94 HOH HOH . G 3 HOH A 20 1020 72 HOH HOH . G 3 HOH A 21 1021 4 HOH HOH . G 3 HOH A 22 1022 58 HOH HOH . G 3 HOH A 23 1023 74 HOH HOH . G 3 HOH A 24 1024 97 HOH HOH . G 3 HOH A 25 1025 101 HOH HOH . G 3 HOH A 26 1026 130 HOH HOH . G 3 HOH A 27 1027 132 HOH HOH . G 3 HOH A 28 1028 126 HOH HOH . G 3 HOH A 29 1029 51 HOH HOH . G 3 HOH A 30 1030 96 HOH HOH . G 3 HOH A 31 1031 26 HOH HOH . G 3 HOH A 32 1032 77 HOH HOH . G 3 HOH A 33 1033 64 HOH HOH . G 3 HOH A 34 1034 33 HOH HOH . G 3 HOH A 35 1035 30 HOH HOH . G 3 HOH A 36 1036 60 HOH HOH . G 3 HOH A 37 1037 46 HOH HOH . G 3 HOH A 38 1038 111 HOH HOH . G 3 HOH A 39 1039 43 HOH HOH . G 3 HOH A 40 1040 113 HOH HOH . G 3 HOH A 41 1041 124 HOH HOH . G 3 HOH A 42 1042 143 HOH HOH . G 3 HOH A 43 1043 44 HOH HOH . G 3 HOH A 44 1044 41 HOH HOH . G 3 HOH A 45 1045 70 HOH HOH . G 3 HOH A 46 1046 63 HOH HOH . G 3 HOH A 47 1047 29 HOH HOH . G 3 HOH A 48 1048 115 HOH HOH . G 3 HOH A 49 1049 80 HOH HOH . G 3 HOH A 50 1050 145 HOH HOH . G 3 HOH A 51 1051 129 HOH HOH . G 3 HOH A 52 1052 114 HOH HOH . G 3 HOH A 53 1053 105 HOH HOH . G 3 HOH A 54 1054 146 HOH HOH . G 3 HOH A 55 1055 127 HOH HOH . G 3 HOH A 56 1056 125 HOH HOH . G 3 HOH A 57 1057 149 HOH HOH . G 3 HOH A 58 1058 155 HOH HOH . G 3 HOH A 59 1059 128 HOH HOH . G 3 HOH A 60 1060 144 HOH HOH . H 3 HOH B 1 1001 56 HOH HOH . H 3 HOH B 2 1002 15 HOH HOH . H 3 HOH B 3 1003 39 HOH HOH . H 3 HOH B 4 1004 38 HOH HOH . H 3 HOH B 5 1005 75 HOH HOH . H 3 HOH B 6 1007 67 HOH HOH . H 3 HOH B 7 1008 73 HOH HOH . H 3 HOH B 8 1009 110 HOH HOH . H 3 HOH B 9 1010 79 HOH HOH . H 3 HOH B 10 1011 12 HOH HOH . H 3 HOH B 11 1012 100 HOH HOH . H 3 HOH B 12 1013 82 HOH HOH . H 3 HOH B 13 1014 28 HOH HOH . H 3 HOH B 14 1015 117 HOH HOH . H 3 HOH B 15 1016 99 HOH HOH . H 3 HOH B 16 1017 148 HOH HOH . H 3 HOH B 17 1018 134 HOH HOH . H 3 HOH B 18 1019 54 HOH HOH . H 3 HOH B 19 1020 90 HOH HOH . H 3 HOH B 20 1021 45 HOH HOH . H 3 HOH B 21 1022 32 HOH HOH . H 3 HOH B 22 1023 108 HOH HOH . H 3 HOH B 23 1024 151 HOH HOH . H 3 HOH B 24 1025 71 HOH HOH . H 3 HOH B 25 1026 106 HOH HOH . H 3 HOH B 26 1027 13 HOH HOH . H 3 HOH B 27 1028 49 HOH HOH . H 3 HOH B 28 1029 16 HOH HOH . H 3 HOH B 29 1030 61 HOH HOH . H 3 HOH B 30 1031 36 HOH HOH . H 3 HOH B 31 1032 116 HOH HOH . H 3 HOH B 32 1033 133 HOH HOH . H 3 HOH B 33 1034 40 HOH HOH . H 3 HOH B 34 1035 85 HOH HOH . H 3 HOH B 35 1036 91 HOH HOH . H 3 HOH B 36 1037 48 HOH HOH . H 3 HOH B 37 1038 118 HOH HOH . H 3 HOH B 38 1039 53 HOH HOH . H 3 HOH B 39 1040 131 HOH HOH . H 3 HOH B 40 1041 119 HOH HOH . H 3 HOH B 41 1042 121 HOH HOH . H 3 HOH B 42 1043 88 HOH HOH . H 3 HOH B 43 1044 120 HOH HOH . H 3 HOH B 44 1045 135 HOH HOH . H 3 HOH B 45 1046 153 HOH HOH . H 3 HOH B 46 1047 154 HOH HOH . I 3 HOH C 1 1001 5 HOH HOH . I 3 HOH C 2 1002 18 HOH HOH . I 3 HOH C 3 1003 107 HOH HOH . I 3 HOH C 4 1004 6 HOH HOH . I 3 HOH C 5 1005 25 HOH HOH . I 3 HOH C 6 1006 87 HOH HOH . I 3 HOH C 7 1007 37 HOH HOH . I 3 HOH C 8 1008 62 HOH HOH . I 3 HOH C 9 1009 98 HOH HOH . I 3 HOH C 10 1010 104 HOH HOH . I 3 HOH C 11 1011 122 HOH HOH . I 3 HOH C 12 1012 14 HOH HOH . I 3 HOH C 13 1013 21 HOH HOH . I 3 HOH C 14 1014 47 HOH HOH . I 3 HOH C 15 1015 142 HOH HOH . I 3 HOH C 16 1016 42 HOH HOH . I 3 HOH C 17 1017 86 HOH HOH . I 3 HOH C 18 1018 20 HOH HOH . I 3 HOH C 19 1019 136 HOH HOH . I 3 HOH C 20 1020 24 HOH HOH . I 3 HOH C 21 1021 23 HOH HOH . I 3 HOH C 22 1022 10 HOH HOH . I 3 HOH C 23 1023 109 HOH HOH . I 3 HOH C 24 1024 95 HOH HOH . I 3 HOH C 25 1025 3 HOH HOH . I 3 HOH C 26 1026 31 HOH HOH . I 3 HOH C 27 1027 83 HOH HOH . I 3 HOH C 28 1028 52 HOH HOH . I 3 HOH C 29 1029 103 HOH HOH . I 3 HOH C 30 1030 89 HOH HOH . I 3 HOH C 31 1031 57 HOH HOH . I 3 HOH C 32 1032 102 HOH HOH . I 3 HOH C 33 1033 78 HOH HOH . I 3 HOH C 34 1034 11 HOH HOH . I 3 HOH C 35 1035 7 HOH HOH . I 3 HOH C 36 1036 1 HOH HOH . I 3 HOH C 37 1037 35 HOH HOH . I 3 HOH C 38 1038 141 HOH HOH . I 3 HOH C 39 1039 2 HOH HOH . I 3 HOH C 40 1040 76 HOH HOH . I 3 HOH C 41 1041 152 HOH HOH . I 3 HOH C 42 1042 55 HOH HOH . I 3 HOH C 43 1043 137 HOH HOH . I 3 HOH C 44 1044 68 HOH HOH . I 3 HOH C 45 1045 138 HOH HOH . I 3 HOH C 46 1046 140 HOH HOH . I 3 HOH C 47 1047 123 HOH HOH . I 3 HOH C 48 1048 139 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x -5.05 _atom_site.Cartn_y -61.547 _atom_site.Cartn_z 26.089 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 46.81 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 900 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 271 _model_server_stats.parse_time_ms 47 _model_server_stats.create_model_time_ms 56 _model_server_stats.query_time_ms 863 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 1 #