data_5NJH # _model_server_result.job_id hyf9_SkPYk98Gw_bhcOsMg _model_server_result.datetime_utc '2024-12-21 13:26:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5njh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":501}' # _entry.id 5NJH # _exptl.entry_id 5NJH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5NJH _cell.length_a 103.43 _cell.length_b 158.353 _cell.length_c 173.458 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NJH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 I N N ? 7 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 G O1G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.957 ? metalc ? metalc2 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.863 ? metalc ? metalc3 H MG MG . A MG 502 1_555 R O HOH . A HOH 616 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc4 H MG MG . A MG 502 1_555 R O HOH . A HOH 622 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc5 H MG MG . A MG 502 1_555 R O HOH . A HOH 635 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc6 H MG MG . A MG 502 1_555 R O HOH . A HOH 636 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc7 L O1G GTP . C GTP 501 1_555 M MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc8 L O1B GTP . C GTP 501 1_555 M MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc9 M MG MG . C MG 502 1_555 T O HOH . C HOH 614 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc10 M MG MG . C MG 502 1_555 T O HOH . C HOH 628 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc11 M MG MG . C MG 502 1_555 T O HOH . C HOH 644 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc12 M MG MG . C MG 502 1_555 T O HOH . C HOH 646 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? metalc ? metalc13 D OE1 GLN 11 D GLN 11 1_555 O MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc14 N O1A GDP . D GDP 501 1_555 O MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc15 O MG MG . D MG 502 1_555 U O HOH . D HOH 620 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc16 O MG MG . D MG 502 1_555 U O HOH . D HOH 638 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc17 F OE1 GLU 331 F GLU 331 1_555 P MG MG . F MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc18 P MG MG . F MG 401 1_555 Q O1G ACP . F ACP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc19 P MG MG . F MG 401 1_555 Q O1B ACP . F ACP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 184 n n PB O2B GDP sing 185 n n PB O3B GDP sing 186 n n PB O3A GDP sing 187 n n O2B HOB2 GDP sing 188 n n O3B HOB3 GDP sing 189 n n O3A PA GDP sing 190 n n PA O1A GDP doub 191 n n PA O2A GDP sing 192 n n PA O5' GDP sing 193 n n O2A HOA2 GDP sing 194 n n O5' C5' GDP sing 195 n n C5' C4' GDP sing 196 n n C5' H5' GDP sing 197 n n C5' "H5''" GDP sing 198 n n C4' O4' GDP sing 199 n n C4' C3' GDP sing 200 n n C4' H4' GDP sing 201 n n O4' C1' GDP sing 202 n n C3' O3' GDP sing 203 n n C3' C2' GDP sing 204 n n C3' H3' GDP sing 205 n n O3' HO3' GDP sing 206 n n C2' O2' GDP sing 207 n n C2' C1' GDP sing 208 n n C2' H2' GDP sing 209 n n O2' HO2' GDP sing 210 n n C1' N9 GDP sing 211 n n C1' H1' GDP sing 212 n n N9 C8 GDP sing 213 n y N9 C4 GDP sing 214 n y C8 N7 GDP doub 215 n y C8 H8 GDP sing 216 n n N7 C5 GDP sing 217 n y C5 C6 GDP sing 218 n n C5 C4 GDP doub 219 n y C6 O6 GDP doub 220 n n C6 N1 GDP sing 221 n n N1 C2 GDP sing 222 n n N1 HN1 GDP sing 223 n n C2 N2 GDP sing 224 n n C2 N3 GDP doub 225 n n N2 HN21 GDP sing 226 n n N2 HN22 GDP sing 227 n n N3 C4 GDP sing 228 n n # _atom_sites.entry_id 5NJH _atom_sites.fract_transf_matrix[1][1] 0.009668 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006315 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005765 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 GTP A 1 501 501 GTP GTP . H 6 MG A 1 502 502 MG MG . I 7 GDP B 1 501 501 GDP GDP . J 6 MG B 1 502 502 MG MG . K 8 8Z8 B 1 503 1 8Z8 DRG . L 5 GTP C 1 501 501 GTP GTP . M 6 MG C 1 502 502 MG MG . N 7 GDP D 1 501 501 GDP GDP . O 6 MG D 1 502 502 MG MG . P 6 MG F 1 401 502 MG MG . Q 9 ACP F 1 402 503 ACP ACP . R 10 HOH A 1 601 165 HOH HOH . R 10 HOH A 2 602 31 HOH HOH . R 10 HOH A 3 603 145 HOH HOH . R 10 HOH A 4 604 33 HOH HOH . R 10 HOH A 5 605 40 HOH HOH . R 10 HOH A 6 606 181 HOH HOH . R 10 HOH A 7 607 148 HOH HOH . R 10 HOH A 8 608 75 HOH HOH . R 10 HOH A 9 609 63 HOH HOH . R 10 HOH A 10 610 376 HOH HOH . R 10 HOH A 11 611 320 HOH HOH . R 10 HOH A 12 612 330 HOH HOH . R 10 HOH A 13 613 26 HOH HOH . R 10 HOH A 14 614 190 HOH HOH . R 10 HOH A 15 615 238 HOH HOH . R 10 HOH A 16 616 110 HOH HOH . R 10 HOH A 17 617 156 HOH HOH . R 10 HOH A 18 618 70 HOH HOH . R 10 HOH A 19 619 109 HOH HOH . R 10 HOH A 20 620 108 HOH HOH . R 10 HOH A 21 621 4 HOH HOH . R 10 HOH A 22 622 178 HOH HOH . R 10 HOH A 23 623 323 HOH HOH . R 10 HOH A 24 624 124 HOH HOH . R 10 HOH A 25 625 149 HOH HOH . R 10 HOH A 26 626 125 HOH HOH . R 10 HOH A 27 627 117 HOH HOH . R 10 HOH A 28 628 16 HOH HOH . R 10 HOH A 29 629 77 HOH HOH . R 10 HOH A 30 630 344 HOH HOH . R 10 HOH A 31 631 207 HOH HOH . R 10 HOH A 32 632 112 HOH HOH . R 10 HOH A 33 633 333 HOH HOH . R 10 HOH A 34 634 34 HOH HOH . R 10 HOH A 35 635 106 HOH HOH . R 10 HOH A 36 636 105 HOH HOH . R 10 HOH A 37 637 326 HOH HOH . R 10 HOH A 38 638 317 HOH HOH . R 10 HOH A 39 639 315 HOH HOH . R 10 HOH A 40 640 64 HOH HOH . R 10 HOH A 41 641 43 HOH HOH . R 10 HOH A 42 642 258 HOH HOH . R 10 HOH A 43 643 138 HOH HOH . R 10 HOH A 44 644 79 HOH HOH . R 10 HOH A 45 645 93 HOH HOH . R 10 HOH A 46 646 343 HOH HOH . R 10 HOH A 47 647 223 HOH HOH . R 10 HOH A 48 648 50 HOH HOH . R 10 HOH A 49 649 101 HOH HOH . R 10 HOH A 50 650 113 HOH HOH . R 10 HOH A 51 651 201 HOH HOH . R 10 HOH A 52 652 25 HOH HOH . R 10 HOH A 53 653 327 HOH HOH . R 10 HOH A 54 654 321 HOH HOH . R 10 HOH A 55 655 329 HOH HOH . R 10 HOH A 56 656 322 HOH HOH . R 10 HOH A 57 657 121 HOH HOH . R 10 HOH A 58 658 311 HOH HOH . R 10 HOH A 59 659 313 HOH HOH . R 10 HOH A 60 660 328 HOH HOH . R 10 HOH A 61 661 174 HOH HOH . R 10 HOH A 62 662 264 HOH HOH . R 10 HOH A 63 663 314 HOH HOH . R 10 HOH A 64 664 377 HOH HOH . R 10 HOH A 65 665 325 HOH HOH . R 10 HOH A 66 666 102 HOH HOH . R 10 HOH A 67 667 331 HOH HOH . R 10 HOH A 68 668 221 HOH HOH . R 10 HOH A 69 669 170 HOH HOH . R 10 HOH A 70 670 262 HOH HOH . R 10 HOH A 71 671 310 HOH HOH . R 10 HOH A 72 672 332 HOH HOH . R 10 HOH A 73 673 324 HOH HOH . R 10 HOH A 74 674 319 HOH HOH . R 10 HOH A 75 675 266 HOH HOH . R 10 HOH A 76 676 318 HOH HOH . R 10 HOH A 77 677 306 HOH HOH . R 10 HOH A 78 678 312 HOH HOH . R 10 HOH A 79 679 305 HOH HOH . S 10 HOH B 1 601 62 HOH HOH . S 10 HOH B 2 602 13 HOH HOH . S 10 HOH B 3 603 80 HOH HOH . S 10 HOH B 4 604 111 HOH HOH . S 10 HOH B 5 605 216 HOH HOH . S 10 HOH B 6 606 60 HOH HOH . S 10 HOH B 7 607 98 HOH HOH . S 10 HOH B 8 608 351 HOH HOH . S 10 HOH B 9 609 196 HOH HOH . S 10 HOH B 10 610 10 HOH HOH . S 10 HOH B 11 611 38 HOH HOH . S 10 HOH B 12 612 5 HOH HOH . S 10 HOH B 13 613 78 HOH HOH . S 10 HOH B 14 614 199 HOH HOH . S 10 HOH B 15 615 95 HOH HOH . S 10 HOH B 16 616 53 HOH HOH . S 10 HOH B 17 617 347 HOH HOH . S 10 HOH B 18 618 379 HOH HOH . S 10 HOH B 19 619 100 HOH HOH . S 10 HOH B 20 620 269 HOH HOH . S 10 HOH B 21 621 107 HOH HOH . S 10 HOH B 22 622 72 HOH HOH . S 10 HOH B 23 623 250 HOH HOH . S 10 HOH B 24 624 261 HOH HOH . S 10 HOH B 25 625 130 HOH HOH . S 10 HOH B 26 626 279 HOH HOH . S 10 HOH B 27 627 48 HOH HOH . S 10 HOH B 28 628 378 HOH HOH . S 10 HOH B 29 629 197 HOH HOH . S 10 HOH B 30 630 270 HOH HOH . S 10 HOH B 31 631 183 HOH HOH . S 10 HOH B 32 632 140 HOH HOH . S 10 HOH B 33 633 209 HOH HOH . S 10 HOH B 34 634 211 HOH HOH . S 10 HOH B 35 635 177 HOH HOH . S 10 HOH B 36 636 352 HOH HOH . S 10 HOH B 37 637 202 HOH HOH . S 10 HOH B 38 638 180 HOH HOH . S 10 HOH B 39 639 135 HOH HOH . S 10 HOH B 40 640 234 HOH HOH . S 10 HOH B 41 641 194 HOH HOH . S 10 HOH B 42 642 348 HOH HOH . S 10 HOH B 43 643 281 HOH HOH . S 10 HOH B 44 644 309 HOH HOH . S 10 HOH B 45 645 345 HOH HOH . S 10 HOH B 46 646 350 HOH HOH . S 10 HOH B 47 647 218 HOH HOH . S 10 HOH B 48 648 308 HOH HOH . S 10 HOH B 49 649 354 HOH HOH . S 10 HOH B 50 650 316 HOH HOH . S 10 HOH B 51 651 342 HOH HOH . S 10 HOH B 52 652 307 HOH HOH . S 10 HOH B 53 653 271 HOH HOH . S 10 HOH B 54 654 346 HOH HOH . S 10 HOH B 55 655 21 HOH HOH . S 10 HOH B 56 656 272 HOH HOH . S 10 HOH B 57 657 253 HOH HOH . S 10 HOH B 58 658 349 HOH HOH . S 10 HOH B 59 659 283 HOH HOH . T 10 HOH C 1 601 71 HOH HOH . T 10 HOH C 2 602 186 HOH HOH . T 10 HOH C 3 603 176 HOH HOH . T 10 HOH C 4 604 236 HOH HOH . T 10 HOH C 5 605 254 HOH HOH . T 10 HOH C 6 606 182 HOH HOH . T 10 HOH C 7 607 14 HOH HOH . T 10 HOH C 8 608 37 HOH HOH . T 10 HOH C 9 609 294 HOH HOH . T 10 HOH C 10 610 208 HOH HOH . T 10 HOH C 11 611 141 HOH HOH . T 10 HOH C 12 612 42 HOH HOH . T 10 HOH C 13 613 222 HOH HOH . T 10 HOH C 14 614 32 HOH HOH . T 10 HOH C 15 615 18 HOH HOH . T 10 HOH C 16 616 3 HOH HOH . T 10 HOH C 17 617 169 HOH HOH . T 10 HOH C 18 618 8 HOH HOH . T 10 HOH C 19 619 126 HOH HOH . T 10 HOH C 20 620 278 HOH HOH . T 10 HOH C 21 621 119 HOH HOH . T 10 HOH C 22 622 69 HOH HOH . T 10 HOH C 23 623 56 HOH HOH . T 10 HOH C 24 624 66 HOH HOH . T 10 HOH C 25 625 49 HOH HOH . T 10 HOH C 26 626 76 HOH HOH . T 10 HOH C 27 627 74 HOH HOH . T 10 HOH C 28 628 97 HOH HOH . T 10 HOH C 29 629 20 HOH HOH . T 10 HOH C 30 630 267 HOH HOH . T 10 HOH C 31 631 28 HOH HOH . T 10 HOH C 32 632 24 HOH HOH . T 10 HOH C 33 633 44 HOH HOH . T 10 HOH C 34 634 11 HOH HOH . T 10 HOH C 35 635 23 HOH HOH . T 10 HOH C 36 636 65 HOH HOH . T 10 HOH C 37 637 122 HOH HOH . T 10 HOH C 38 638 27 HOH HOH . T 10 HOH C 39 639 161 HOH HOH . T 10 HOH C 40 640 198 HOH HOH . T 10 HOH C 41 641 230 HOH HOH . T 10 HOH C 42 642 9 HOH HOH . T 10 HOH C 43 643 139 HOH HOH . T 10 HOH C 44 644 103 HOH HOH . T 10 HOH C 45 645 242 HOH HOH . T 10 HOH C 46 646 6 HOH HOH . T 10 HOH C 47 647 273 HOH HOH . T 10 HOH C 48 648 83 HOH HOH . T 10 HOH C 49 649 81 HOH HOH . T 10 HOH C 50 650 114 HOH HOH . T 10 HOH C 51 651 220 HOH HOH . T 10 HOH C 52 652 304 HOH HOH . T 10 HOH C 53 653 233 HOH HOH . T 10 HOH C 54 654 295 HOH HOH . T 10 HOH C 55 655 243 HOH HOH . T 10 HOH C 56 656 116 HOH HOH . T 10 HOH C 57 657 212 HOH HOH . T 10 HOH C 58 658 88 HOH HOH . T 10 HOH C 59 659 192 HOH HOH . T 10 HOH C 60 660 118 HOH HOH . T 10 HOH C 61 661 363 HOH HOH . T 10 HOH C 62 662 158 HOH HOH . T 10 HOH C 63 663 226 HOH HOH . T 10 HOH C 64 664 355 HOH HOH . T 10 HOH C 65 665 228 HOH HOH . T 10 HOH C 66 666 276 HOH HOH . T 10 HOH C 67 667 277 HOH HOH . T 10 HOH C 68 668 239 HOH HOH . T 10 HOH C 69 669 172 HOH HOH . T 10 HOH C 70 670 142 HOH HOH . T 10 HOH C 71 671 296 HOH HOH . T 10 HOH C 72 672 384 HOH HOH . T 10 HOH C 73 673 358 HOH HOH . T 10 HOH C 74 674 284 HOH HOH . T 10 HOH C 75 675 255 HOH HOH . T 10 HOH C 76 676 299 HOH HOH . T 10 HOH C 77 677 297 HOH HOH . T 10 HOH C 78 678 275 HOH HOH . T 10 HOH C 79 679 274 HOH HOH . T 10 HOH C 80 680 210 HOH HOH . T 10 HOH C 81 681 280 HOH HOH . T 10 HOH C 82 682 45 HOH HOH . T 10 HOH C 83 683 240 HOH HOH . T 10 HOH C 84 684 356 HOH HOH . T 10 HOH C 85 685 248 HOH HOH . T 10 HOH C 86 686 360 HOH HOH . T 10 HOH C 87 687 166 HOH HOH . T 10 HOH C 88 688 214 HOH HOH . T 10 HOH C 89 689 133 HOH HOH . T 10 HOH C 90 690 293 HOH HOH . T 10 HOH C 91 691 361 HOH HOH . T 10 HOH C 92 692 147 HOH HOH . T 10 HOH C 93 693 282 HOH HOH . T 10 HOH C 94 694 259 HOH HOH . T 10 HOH C 95 695 359 HOH HOH . T 10 HOH C 96 696 362 HOH HOH . T 10 HOH C 97 697 385 HOH HOH . T 10 HOH C 98 698 160 HOH HOH . U 10 HOH D 1 601 229 HOH HOH . U 10 HOH D 2 602 205 HOH HOH . U 10 HOH D 3 603 115 HOH HOH . U 10 HOH D 4 604 104 HOH HOH . U 10 HOH D 5 605 173 HOH HOH . U 10 HOH D 6 606 120 HOH HOH . U 10 HOH D 7 607 153 HOH HOH . U 10 HOH D 8 608 193 HOH HOH . U 10 HOH D 9 609 370 HOH HOH . U 10 HOH D 10 610 155 HOH HOH . U 10 HOH D 11 611 30 HOH HOH . U 10 HOH D 12 612 55 HOH HOH . U 10 HOH D 13 613 260 HOH HOH . U 10 HOH D 14 614 68 HOH HOH . U 10 HOH D 15 615 144 HOH HOH . U 10 HOH D 16 616 47 HOH HOH . U 10 HOH D 17 617 54 HOH HOH . U 10 HOH D 18 618 90 HOH HOH . U 10 HOH D 19 619 1 HOH HOH . U 10 HOH D 20 620 151 HOH HOH . U 10 HOH D 21 621 12 HOH HOH . U 10 HOH D 22 622 128 HOH HOH . U 10 HOH D 23 623 150 HOH HOH . U 10 HOH D 24 624 89 HOH HOH . U 10 HOH D 25 625 94 HOH HOH . U 10 HOH D 26 626 167 HOH HOH . U 10 HOH D 27 627 51 HOH HOH . U 10 HOH D 28 628 204 HOH HOH . U 10 HOH D 29 629 57 HOH HOH . U 10 HOH D 30 630 224 HOH HOH . U 10 HOH D 31 631 200 HOH HOH . U 10 HOH D 32 632 162 HOH HOH . U 10 HOH D 33 633 136 HOH HOH . U 10 HOH D 34 634 188 HOH HOH . U 10 HOH D 35 635 146 HOH HOH . U 10 HOH D 36 636 92 HOH HOH . U 10 HOH D 37 637 369 HOH HOH . U 10 HOH D 38 638 237 HOH HOH . U 10 HOH D 39 639 123 HOH HOH . U 10 HOH D 40 640 73 HOH HOH . U 10 HOH D 41 641 91 HOH HOH . U 10 HOH D 42 642 232 HOH HOH . U 10 HOH D 43 643 249 HOH HOH . U 10 HOH D 44 644 203 HOH HOH . U 10 HOH D 45 645 364 HOH HOH . U 10 HOH D 46 646 87 HOH HOH . U 10 HOH D 47 647 59 HOH HOH . U 10 HOH D 48 648 380 HOH HOH . U 10 HOH D 49 649 382 HOH HOH . U 10 HOH D 50 650 298 HOH HOH . U 10 HOH D 51 651 381 HOH HOH . U 10 HOH D 52 652 152 HOH HOH . U 10 HOH D 53 653 301 HOH HOH . U 10 HOH D 54 654 367 HOH HOH . U 10 HOH D 55 655 302 HOH HOH . U 10 HOH D 56 656 365 HOH HOH . U 10 HOH D 57 657 303 HOH HOH . U 10 HOH D 58 658 357 HOH HOH . U 10 HOH D 59 659 366 HOH HOH . U 10 HOH D 60 660 371 HOH HOH . U 10 HOH D 61 661 368 HOH HOH . U 10 HOH D 62 662 300 HOH HOH . V 10 HOH E 1 201 206 HOH HOH . V 10 HOH E 2 202 58 HOH HOH . V 10 HOH E 3 203 129 HOH HOH . V 10 HOH E 4 204 131 HOH HOH . V 10 HOH E 5 205 164 HOH HOH . V 10 HOH E 6 206 227 HOH HOH . V 10 HOH E 7 207 35 HOH HOH . V 10 HOH E 8 208 46 HOH HOH . V 10 HOH E 9 209 263 HOH HOH . V 10 HOH E 10 210 163 HOH HOH . V 10 HOH E 11 211 244 HOH HOH . V 10 HOH E 12 212 96 HOH HOH . V 10 HOH E 13 213 213 HOH HOH . V 10 HOH E 14 214 375 HOH HOH . V 10 HOH E 15 215 257 HOH HOH . V 10 HOH E 16 216 383 HOH HOH . V 10 HOH E 17 217 353 HOH HOH . V 10 HOH E 18 218 256 HOH HOH . W 10 HOH F 1 501 252 HOH HOH . W 10 HOH F 2 502 67 HOH HOH . W 10 HOH F 3 503 251 HOH HOH . W 10 HOH F 4 504 2 HOH HOH . W 10 HOH F 5 505 179 HOH HOH . W 10 HOH F 6 506 52 HOH HOH . W 10 HOH F 7 507 82 HOH HOH . W 10 HOH F 8 508 154 HOH HOH . W 10 HOH F 9 509 191 HOH HOH . W 10 HOH F 10 510 373 HOH HOH . W 10 HOH F 11 511 215 HOH HOH . W 10 HOH F 12 512 195 HOH HOH . W 10 HOH F 13 513 61 HOH HOH . W 10 HOH F 14 514 246 HOH HOH . W 10 HOH F 15 515 39 HOH HOH . W 10 HOH F 16 516 7 HOH HOH . W 10 HOH F 17 517 17 HOH HOH . W 10 HOH F 18 518 36 HOH HOH . W 10 HOH F 19 519 86 HOH HOH . W 10 HOH F 20 520 15 HOH HOH . W 10 HOH F 21 521 85 HOH HOH . W 10 HOH F 22 522 29 HOH HOH . W 10 HOH F 23 523 132 HOH HOH . W 10 HOH F 24 524 374 HOH HOH . W 10 HOH F 25 525 41 HOH HOH . W 10 HOH F 26 526 231 HOH HOH . W 10 HOH F 27 527 268 HOH HOH . W 10 HOH F 28 528 22 HOH HOH . W 10 HOH F 29 529 157 HOH HOH . W 10 HOH F 30 530 127 HOH HOH . W 10 HOH F 31 531 187 HOH HOH . W 10 HOH F 32 532 265 HOH HOH . W 10 HOH F 33 533 235 HOH HOH . W 10 HOH F 34 534 336 HOH HOH . W 10 HOH F 35 535 372 HOH HOH . W 10 HOH F 36 536 334 HOH HOH . W 10 HOH F 37 537 339 HOH HOH . W 10 HOH F 38 538 335 HOH HOH . W 10 HOH F 39 539 341 HOH HOH . W 10 HOH F 40 540 225 HOH HOH . W 10 HOH F 41 541 337 HOH HOH . W 10 HOH F 42 542 175 HOH HOH . W 10 HOH F 43 543 338 HOH HOH . W 10 HOH F 44 544 134 HOH HOH . W 10 HOH F 45 545 340 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . I 7 19.765 48.24 14.191 1 40.44 ? PB GDP 501 B 1 HETATM 2 O O1B GDP . . . I 7 19.382 49.155 13.059 1 42.76 ? O1B GDP 501 B 1 HETATM 3 O O2B GDP . . . I 7 20.204 49.05 15.392 1 51.02 ? O2B GDP 501 B 1 HETATM 4 O O3B GDP . . . I 7 20.904 47.35 13.751 1 55.99 ? O3B GDP 501 B 1 HETATM 5 O O3A GDP . . . I 7 18.51 47.319 14.594 1 50.41 ? O3A GDP 501 B 1 HETATM 6 P PA GDP . . . I 7 17.131 47.979 15.101 1 59.07 ? PA GDP 501 B 1 HETATM 7 O O1A GDP . . . I 7 16.042 47.785 14.076 1 51.52 ? O1A GDP 501 B 1 HETATM 8 O O2A GDP . . . I 7 17.322 49.446 15.411 1 55.93 ? O2A GDP 501 B 1 HETATM 9 O O5' GDP . . . I 7 16.772 47.158 16.439 1 66.83 ? O5' GDP 501 B 1 HETATM 10 C C5' GDP . . . I 7 15.901 46.038 16.341 1 66.99 ? C5' GDP 501 B 1 HETATM 11 C C4' GDP . . . I 7 14.615 46.275 17.117 1 73.2 ? C4' GDP 501 B 1 HETATM 12 O O4' GDP . . . I 7 14.18 47.63 16.949 1 58.19 ? O4' GDP 501 B 1 HETATM 13 C C3' GDP . . . I 7 13.511 45.398 16.549 1 61.75 ? C3' GDP 501 B 1 HETATM 14 O O3' GDP . . . I 7 12.782 44.787 17.614 1 63.17 ? O3' GDP 501 B 1 HETATM 15 C C2' GDP . . . I 7 12.603 46.358 15.815 1 60.76 ? C2' GDP 501 B 1 HETATM 16 O O2' GDP . . . I 7 11.248 45.906 15.809 1 65.4 ? O2' GDP 501 B 1 HETATM 17 C C1' GDP . . . I 7 12.787 47.629 16.625 1 62.09 ? C1' GDP 501 B 1 HETATM 18 N N9 GDP . . . I 7 12.353 48.825 15.858 1 59.68 ? N9 GDP 501 B 1 HETATM 19 C C8 GDP . . . I 7 12.539 49.06 14.546 1 61.03 ? C8 GDP 501 B 1 HETATM 20 N N7 GDP . . . I 7 12.001 50.257 14.187 1 68.13 ? N7 GDP 501 B 1 HETATM 21 C C5 GDP . . . I 7 11.463 50.808 15.291 1 57.23 ? C5 GDP 501 B 1 HETATM 22 C C6 GDP . . . I 7 10.741 52.059 15.623 1 56.11 ? C6 GDP 501 B 1 HETATM 23 O O6 GDP . . . I 7 10.503 52.915 14.745 1 57.8 ? O6 GDP 501 B 1 HETATM 24 N N1 GDP . . . I 7 10.351 52.245 16.891 1 53.94 ? N1 GDP 501 B 1 HETATM 25 C C2 GDP . . . I 7 10.593 51.34 17.858 1 53.68 ? C2 GDP 501 B 1 HETATM 26 N N2 GDP . . . I 7 10.167 51.603 19.117 1 53.63 ? N2 GDP 501 B 1 HETATM 27 N N3 GDP . . . I 7 11.247 50.174 17.625 1 53.18 ? N3 GDP 501 B 1 HETATM 28 C C4 GDP . . . I 7 11.696 49.86 16.387 1 57.11 ? C4 GDP 501 B 1 # _model_server_stats.io_time_ms 39 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #