data_5NLX # _model_server_result.job_id JknN5bvjbaBdnvEC2CAvyg _model_server_result.datetime_utc '2024-11-22 18:27:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5nlx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 5NLX # _exptl.entry_id 5NLX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.461 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OLEIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5NLX _cell.length_a 40.33 _cell.length_b 180.07 _cell.length_c 142.66 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NLX _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 80 A CYS 80 1_555 A SG CYS 168 A CYS 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 83 A CYS 83 1_555 A SG CYS 155 A CYS 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? disulf ? disulf3 A SG CYS 86 A CYS 86 1_555 A SG CYS 175 A CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? disulf ? disulf4 A SG CYS 364 A CYS 364 1_555 A SG CYS 367 A CYS 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc1 A OD1 ASP 61 A ASP 61 1_555 E NA NA . A NA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? metalc ? metalc2 A OG SER 100 A SER 100 1_555 E NA NA . A NA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.586 ? metalc ? metalc3 E NA NA . A NA 504 1_555 J O HOH . A HOH 615 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? metalc ? metalc4 E NA NA . A NA 504 1_555 J O HOH . A HOH 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc5 E NA NA . A NA 504 1_555 J O HOH . A HOH 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? # _chem_comp.formula 'C18 H34 O2' _chem_comp.formula_weight 282.461 _chem_comp.id OLA _chem_comp.mon_nstd_flag . _chem_comp.name 'OLEIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 OLA doub 314 n n C1 O2 OLA sing 315 n n C1 C2 OLA sing 316 n n O2 HO2 OLA sing 317 n n C2 C3 OLA sing 318 n n C2 H21 OLA sing 319 n n C2 H22 OLA sing 320 n n C3 C4 OLA sing 321 n n C3 H31 OLA sing 322 n n C3 H32 OLA sing 323 n n C4 C5 OLA sing 324 n n C4 H41 OLA sing 325 n n C4 H42 OLA sing 326 n n C5 C6 OLA sing 327 n n C5 H51 OLA sing 328 n n C5 H52 OLA sing 329 n n C6 C7 OLA sing 330 n n C6 H61 OLA sing 331 n n C6 H62 OLA sing 332 n n C7 C8 OLA sing 333 n n C7 H71 OLA sing 334 n n C7 H72 OLA sing 335 n n C8 C9 OLA sing 336 n n C8 H81 OLA sing 337 n n C8 H82 OLA sing 338 n n C9 C10 OLA doub 339 z n C9 H9 OLA sing 340 n n C10 C11 OLA sing 341 n n C10 H10 OLA sing 342 n n C11 C12 OLA sing 343 n n C11 H111 OLA sing 344 n n C11 H112 OLA sing 345 n n C12 C13 OLA sing 346 n n C12 H121 OLA sing 347 n n C12 H122 OLA sing 348 n n C13 C14 OLA sing 349 n n C13 H131 OLA sing 350 n n C13 H132 OLA sing 351 n n C14 C15 OLA sing 352 n n C14 H141 OLA sing 353 n n C14 H142 OLA sing 354 n n C15 C16 OLA sing 355 n n C15 H151 OLA sing 356 n n C15 H152 OLA sing 357 n n C16 C17 OLA sing 358 n n C16 H161 OLA sing 359 n n C16 H162 OLA sing 360 n n C17 C18 OLA sing 361 n n C17 H171 OLA sing 362 n n C17 H172 OLA sing 363 n n C18 H181 OLA sing 364 n n C18 H182 OLA sing 365 n n C18 H183 OLA sing 366 n n # _atom_sites.entry_id 5NLX _atom_sites.fract_transf_matrix[1][1] 0.024795 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005553 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00701 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OLA A 1 501 1 OLA OLA . C 2 OLA A 1 502 2 OLA OLA . D 2 OLA A 1 503 3 OLA OLA . E 3 NA A 1 504 1 NA NA . F 4 ZMA A 1 505 1 ZMA ZMA . G 5 CLR A 1 506 1 CLR XXX . H 5 CLR A 1 507 2 CLR XXX . I 5 CLR A 1 508 3 CLR XXX . J 6 HOH A 1 601 15 HOH HOH . J 6 HOH A 2 602 12 HOH HOH . J 6 HOH A 3 603 23 HOH HOH . J 6 HOH A 4 604 22 HOH HOH . J 6 HOH A 5 605 17 HOH HOH . J 6 HOH A 6 606 5 HOH HOH . J 6 HOH A 7 607 11 HOH HOH . J 6 HOH A 8 608 14 HOH HOH . J 6 HOH A 9 609 7 HOH HOH . J 6 HOH A 10 610 19 HOH HOH . J 6 HOH A 11 611 1 HOH HOH . J 6 HOH A 12 612 3 HOH HOH . J 6 HOH A 13 613 2 HOH HOH . J 6 HOH A 14 614 20 HOH HOH . J 6 HOH A 15 615 29 HOH HOH . J 6 HOH A 16 616 6 HOH HOH . J 6 HOH A 17 617 31 HOH HOH . J 6 HOH A 18 618 27 HOH HOH . J 6 HOH A 19 619 13 HOH HOH . J 6 HOH A 20 620 9 HOH HOH . J 6 HOH A 21 621 8 HOH HOH . J 6 HOH A 22 622 4 HOH HOH . J 6 HOH A 23 623 18 HOH HOH . J 6 HOH A 24 624 10 HOH HOH . J 6 HOH A 25 625 33 HOH HOH . J 6 HOH A 26 626 32 HOH HOH . J 6 HOH A 27 627 24 HOH HOH . J 6 HOH A 28 628 26 HOH HOH . J 6 HOH A 29 629 16 HOH HOH . J 6 HOH A 30 630 30 HOH HOH . J 6 HOH A 31 631 21 HOH HOH . J 6 HOH A 32 632 25 HOH HOH . J 6 HOH A 33 633 28 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OLA . . . C 2 22.511 105.576 57.119 1 112.44 ? C1 OLA 502 A 1 HETATM 2 O O1 OLA . . . C 2 22.092 106.689 56.676 1 111.15 ? O1 OLA 502 A 1 HETATM 3 O O2 OLA . . . C 2 23.737 105.394 57.379 1 113.58 ? O2 OLA 502 A 1 HETATM 4 C C2 OLA . . . C 2 21.514 104.429 57.35 1 111.72 ? C2 OLA 502 A 1 HETATM 5 C C3 OLA . . . C 2 21.873 103.228 56.465 1 109.81 ? C3 OLA 502 A 1 HETATM 6 C C4 OLA . . . C 2 22.302 102.014 57.319 1 108.58 ? C4 OLA 502 A 1 HETATM 7 C C5 OLA . . . C 2 21.402 100.814 57.013 1 107.03 ? C5 OLA 502 A 1 HETATM 8 C C6 OLA . . . C 2 22.053 99.564 57.633 1 107.42 ? C6 OLA 502 A 1 HETATM 9 C C7 OLA . . . C 2 21.293 98.296 57.207 1 108.46 ? C7 OLA 502 A 1 HETATM 10 C C8 OLA . . . C 2 22.259 97.079 57.126 1 108.54 ? C8 OLA 502 A 1 HETATM 11 C C9 OLA . . . C 2 21.665 95.857 57.855 1 108.63 ? C9 OLA 502 A 1 HETATM 12 C C10 OLA . . . C 2 22.247 94.651 57.82 1 108.39 ? C10 OLA 502 A 1 HETATM 13 C C11 OLA . . . C 2 23.55 94.373 57.043 1 107.59 ? C11 OLA 502 A 1 HETATM 14 C C12 OLA . . . C 2 24.164 93.048 57.537 1 108.17 ? C12 OLA 502 A 1 HETATM 15 C C13 OLA . . . C 2 24.01 91.934 56.5 1 107.22 ? C13 OLA 502 A 1 HETATM 16 C C14 OLA . . . C 2 24.743 90.689 57.022 1 107.45 ? C14 OLA 502 A 1 HETATM 17 C C15 OLA . . . C 2 24.556 89.534 56.034 1 109.8 ? C15 OLA 502 A 1 HETATM 18 C C16 OLA . . . C 2 23.167 88.9 56.241 1 111.9 ? C16 OLA 502 A 1 HETATM 19 C C17 OLA . . . C 2 22.879 87.914 55.113 1 113.47 ? C17 OLA 502 A 1 HETATM 20 C C18 OLA . . . C 2 21.551 87.187 55.389 1 112.82 ? C18 OLA 502 A 1 HETATM 21 H H21 OLA . . . C 2 20.619 104.733 57.131 1 134.07 ? H21 OLA 502 A 1 HETATM 22 H H22 OLA . . . C 2 21.544 104.162 58.282 1 134.07 ? H22 OLA 502 A 1 HETATM 23 H H31 OLA . . . C 2 21.1 102.984 55.932 1 131.77 ? H31 OLA 502 A 1 HETATM 24 H H32 OLA . . . C 2 22.601 103.475 55.875 1 131.77 ? H32 OLA 502 A 1 HETATM 25 H H41 OLA . . . C 2 23.222 101.785 57.114 1 130.29 ? H41 OLA 502 A 1 HETATM 26 H H42 OLA . . . C 2 22.229 102.239 58.26 1 130.29 ? H42 OLA 502 A 1 HETATM 27 H H51 OLA . . . C 2 21.321 100.7 56.054 1 128.43 ? H51 OLA 502 A 1 HETATM 28 H H52 OLA . . . C 2 20.524 100.955 57.403 1 128.43 ? H52 OLA 502 A 1 HETATM 29 H H61 OLA . . . C 2 22.973 99.502 57.335 1 128.91 ? H61 OLA 502 A 1 HETATM 30 H H62 OLA . . . C 2 22.033 99.64 58.6 1 128.91 ? H62 OLA 502 A 1 HETATM 31 H H71 OLA . . . C 2 20.596 98.107 57.856 1 130.16 ? H71 OLA 502 A 1 HETATM 32 H H72 OLA . . . C 2 20.889 98.442 56.338 1 130.16 ? H72 OLA 502 A 1 HETATM 33 H H81 OLA . . . C 2 22.409 96.853 56.194 1 130.25 ? H81 OLA 502 A 1 HETATM 34 H H82 OLA . . . C 2 23.105 97.316 57.537 1 130.25 ? H82 OLA 502 A 1 HETATM 35 H H9 OLA . . . C 2 20.879 95.963 58.342 1 130.35 ? H9 OLA 502 A 1 HETATM 36 H H10 OLA . . . C 2 21.844 93.95 58.279 1 130.07 ? H10 OLA 502 A 1 HETATM 37 H H111 OLA . . . C 2 23.353 94.306 56.095 1 129.11 ? H111 OLA 502 A 1 HETATM 38 H H112 OLA . . . C 2 24.177 95.097 57.193 1 129.11 ? H112 OLA 502 A 1 HETATM 39 H H121 OLA . . . C 2 23.72 92.78 58.357 1 129.8 ? H121 OLA 502 A 1 HETATM 40 H H122 OLA . . . C 2 25.107 93.185 57.718 1 129.8 ? H122 OLA 502 A 1 HETATM 41 H H131 OLA . . . C 2 24.401 92.214 55.658 1 128.66 ? H131 OLA 502 A 1 HETATM 42 H H132 OLA . . . C 2 23.07 91.731 56.374 1 128.66 ? H132 OLA 502 A 1 HETATM 43 H H141 OLA . . . C 2 25.689 90.885 57.114 1 128.94 ? H141 OLA 502 A 1 HETATM 44 H H142 OLA . . . C 2 24.38 90.438 57.886 1 128.94 ? H142 OLA 502 A 1 HETATM 45 H H151 OLA . . . C 2 25.242 88.866 56.185 1 131.75 ? H151 OLA 502 A 1 HETATM 46 H H152 OLA . . . C 2 24.626 89.871 55.127 1 131.75 ? H152 OLA 502 A 1 HETATM 47 H H161 OLA . . . C 2 23.149 88.432 57.091 1 134.27 ? H161 OLA 502 A 1 HETATM 48 H H162 OLA . . . C 2 22.491 89.596 56.242 1 134.27 ? H162 OLA 502 A 1 HETATM 49 H H171 OLA . . . C 2 23.598 87.265 55.06 1 136.16 ? H171 OLA 502 A 1 HETATM 50 H H172 OLA . . . C 2 22.815 88.394 54.272 1 136.16 ? H172 OLA 502 A 1 HETATM 51 H H181 OLA . . . C 2 21.635 86.657 56.197 1 135.38 ? H181 OLA 502 A 1 HETATM 52 H H182 OLA . . . C 2 20.843 87.84 55.503 1 135.38 ? H182 OLA 502 A 1 HETATM 53 H H183 OLA . . . C 2 21.339 86.606 54.642 1 135.38 ? H183 OLA 502 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 40 _model_server_stats.create_model_time_ms 38 _model_server_stats.query_time_ms 440 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 53 #