data_5NLX # _model_server_result.job_id vhahP_tlx8YlAcWk3Slg3A _model_server_result.datetime_utc '2024-11-22 18:30:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5nlx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 5NLX # _exptl.entry_id 5NLX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.461 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OLEIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5NLX _cell.length_a 40.33 _cell.length_b 180.07 _cell.length_c 142.66 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NLX _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 80 A CYS 80 1_555 A SG CYS 168 A CYS 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 83 A CYS 83 1_555 A SG CYS 155 A CYS 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? disulf ? disulf3 A SG CYS 86 A CYS 86 1_555 A SG CYS 175 A CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? disulf ? disulf4 A SG CYS 364 A CYS 364 1_555 A SG CYS 367 A CYS 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc1 A OD1 ASP 61 A ASP 61 1_555 E NA NA . A NA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? metalc ? metalc2 A OG SER 100 A SER 100 1_555 E NA NA . A NA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.586 ? metalc ? metalc3 E NA NA . A NA 504 1_555 J O HOH . A HOH 615 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? metalc ? metalc4 E NA NA . A NA 504 1_555 J O HOH . A HOH 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc5 E NA NA . A NA 504 1_555 J O HOH . A HOH 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? # _chem_comp.formula 'C18 H34 O2' _chem_comp.formula_weight 282.461 _chem_comp.id OLA _chem_comp.mon_nstd_flag . _chem_comp.name 'OLEIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 OLA doub 314 n n C1 O2 OLA sing 315 n n C1 C2 OLA sing 316 n n O2 HO2 OLA sing 317 n n C2 C3 OLA sing 318 n n C2 H21 OLA sing 319 n n C2 H22 OLA sing 320 n n C3 C4 OLA sing 321 n n C3 H31 OLA sing 322 n n C3 H32 OLA sing 323 n n C4 C5 OLA sing 324 n n C4 H41 OLA sing 325 n n C4 H42 OLA sing 326 n n C5 C6 OLA sing 327 n n C5 H51 OLA sing 328 n n C5 H52 OLA sing 329 n n C6 C7 OLA sing 330 n n C6 H61 OLA sing 331 n n C6 H62 OLA sing 332 n n C7 C8 OLA sing 333 n n C7 H71 OLA sing 334 n n C7 H72 OLA sing 335 n n C8 C9 OLA sing 336 n n C8 H81 OLA sing 337 n n C8 H82 OLA sing 338 n n C9 C10 OLA doub 339 z n C9 H9 OLA sing 340 n n C10 C11 OLA sing 341 n n C10 H10 OLA sing 342 n n C11 C12 OLA sing 343 n n C11 H111 OLA sing 344 n n C11 H112 OLA sing 345 n n C12 C13 OLA sing 346 n n C12 H121 OLA sing 347 n n C12 H122 OLA sing 348 n n C13 C14 OLA sing 349 n n C13 H131 OLA sing 350 n n C13 H132 OLA sing 351 n n C14 C15 OLA sing 352 n n C14 H141 OLA sing 353 n n C14 H142 OLA sing 354 n n C15 C16 OLA sing 355 n n C15 H151 OLA sing 356 n n C15 H152 OLA sing 357 n n C16 C17 OLA sing 358 n n C16 H161 OLA sing 359 n n C16 H162 OLA sing 360 n n C17 C18 OLA sing 361 n n C17 H171 OLA sing 362 n n C17 H172 OLA sing 363 n n C18 H181 OLA sing 364 n n C18 H182 OLA sing 365 n n C18 H183 OLA sing 366 n n # _atom_sites.entry_id 5NLX _atom_sites.fract_transf_matrix[1][1] 0.024795 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005553 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00701 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OLA A 1 501 1 OLA OLA . C 2 OLA A 1 502 2 OLA OLA . D 2 OLA A 1 503 3 OLA OLA . E 3 NA A 1 504 1 NA NA . F 4 ZMA A 1 505 1 ZMA ZMA . G 5 CLR A 1 506 1 CLR XXX . H 5 CLR A 1 507 2 CLR XXX . I 5 CLR A 1 508 3 CLR XXX . J 6 HOH A 1 601 15 HOH HOH . J 6 HOH A 2 602 12 HOH HOH . J 6 HOH A 3 603 23 HOH HOH . J 6 HOH A 4 604 22 HOH HOH . J 6 HOH A 5 605 17 HOH HOH . J 6 HOH A 6 606 5 HOH HOH . J 6 HOH A 7 607 11 HOH HOH . J 6 HOH A 8 608 14 HOH HOH . J 6 HOH A 9 609 7 HOH HOH . J 6 HOH A 10 610 19 HOH HOH . J 6 HOH A 11 611 1 HOH HOH . J 6 HOH A 12 612 3 HOH HOH . J 6 HOH A 13 613 2 HOH HOH . J 6 HOH A 14 614 20 HOH HOH . J 6 HOH A 15 615 29 HOH HOH . J 6 HOH A 16 616 6 HOH HOH . J 6 HOH A 17 617 31 HOH HOH . J 6 HOH A 18 618 27 HOH HOH . J 6 HOH A 19 619 13 HOH HOH . J 6 HOH A 20 620 9 HOH HOH . J 6 HOH A 21 621 8 HOH HOH . J 6 HOH A 22 622 4 HOH HOH . J 6 HOH A 23 623 18 HOH HOH . J 6 HOH A 24 624 10 HOH HOH . J 6 HOH A 25 625 33 HOH HOH . J 6 HOH A 26 626 32 HOH HOH . J 6 HOH A 27 627 24 HOH HOH . J 6 HOH A 28 628 26 HOH HOH . J 6 HOH A 29 629 16 HOH HOH . J 6 HOH A 30 630 30 HOH HOH . J 6 HOH A 31 631 21 HOH HOH . J 6 HOH A 32 632 25 HOH HOH . J 6 HOH A 33 633 28 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OLA . . . D 2 22.322 102.91 44.909 1 108.98 ? C1 OLA 503 A 1 HETATM 2 O O1 OLA . . . D 2 23.527 103.195 44.624 1 109.91 ? O1 OLA 503 A 1 HETATM 3 O O2 OLA . . . D 2 21.536 103.789 45.382 1 108.13 ? O2 OLA 503 A 1 HETATM 4 C C2 OLA . . . D 2 21.785 101.482 44.695 1 106.63 ? C2 OLA 503 A 1 HETATM 5 C C3 OLA . . . D 2 22.87 100.417 44.812 1 105.37 ? C3 OLA 503 A 1 HETATM 6 C C4 OLA . . . D 2 22.244 99.06 44.421 1 103.75 ? C4 OLA 503 A 1 HETATM 7 C C5 OLA . . . D 2 22.798 97.948 45.324 1 102.62 ? C5 OLA 503 A 1 HETATM 8 C C6 OLA . . . D 2 22.694 96.594 44.592 1 102.81 ? C6 OLA 503 A 1 HETATM 9 C C7 OLA . . . D 2 23.003 95.422 45.544 1 101.3 ? C7 OLA 503 A 1 HETATM 10 C C8 OLA . . . D 2 23.417 94.179 44.72 1 101.93 ? C8 OLA 503 A 1 HETATM 11 C C9 OLA . . . D 2 23.25 92.907 45.575 1 101.17 ? C9 OLA 503 A 1 HETATM 12 C C10 OLA . . . D 2 23.683 91.745 45.103 1 102.28 ? C10 OLA 503 A 1 HETATM 13 C C11 OLA . . . D 2 24.356 91.7 43.713 1 103.94 ? C11 OLA 503 A 1 HETATM 14 H H21 OLA . . . D 2 21.099 101.304 45.357 1 127.96 ? H21 OLA 503 A 1 HETATM 15 H H22 OLA . . . D 2 21.388 101.428 43.812 1 127.96 ? H22 OLA 503 A 1 HETATM 16 H H31 OLA . . . D 2 23.195 100.377 45.725 1 126.44 ? H31 OLA 503 A 1 HETATM 17 H H32 OLA . . . D 2 23.602 100.626 44.211 1 126.44 ? H32 OLA 503 A 1 HETATM 18 H H41 OLA . . . D 2 22.459 98.86 43.496 1 124.5 ? H41 OLA 503 A 1 HETATM 19 H H42 OLA . . . D 2 21.281 99.108 44.524 1 124.5 ? H42 OLA 503 A 1 HETATM 20 H H51 OLA . . . D 2 23.727 98.133 45.533 1 123.15 ? H51 OLA 503 A 1 HETATM 21 H H52 OLA . . . D 2 22.283 97.911 46.146 1 123.15 ? H52 OLA 503 A 1 HETATM 22 H H61 OLA . . . D 2 21.796 96.49 44.241 1 123.37 ? H61 OLA 503 A 1 HETATM 23 H H62 OLA . . . D 2 23.327 96.581 43.857 1 123.37 ? H62 OLA 503 A 1 HETATM 24 H H71 OLA . . . D 2 22.213 95.214 46.067 1 121.56 ? H71 OLA 503 A 1 HETATM 25 H H72 OLA . . . D 2 23.728 95.671 46.139 1 121.56 ? H72 OLA 503 A 1 HETATM 26 H H81 OLA . . . D 2 24.345 94.266 44.449 1 122.32 ? H81 OLA 503 A 1 HETATM 27 H H82 OLA . . . D 2 22.856 94.113 43.931 1 122.32 ? H82 OLA 503 A 1 HETATM 28 H H9 OLA . . . D 2 22.843 92.953 46.409 1 121.41 ? H9 OLA 503 A 1 HETATM 29 H H10 OLA . . . D 2 23.59 90.969 45.607 1 122.73 ? H10 OLA 503 A 1 HETATM 30 H H111 OLA . . . D 2 25.152 92.255 43.721 1 124.73 ? H111 OLA 503 A 1 HETATM 31 H H112 OLA . . . D 2 23.737 92.032 43.044 1 124.73 ? H112 OLA 503 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 355 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 31 #