data_5NLX # _model_server_result.job_id 9S4N7jK2nbD6X1pZCdM7Dw _model_server_result.datetime_utc '2024-11-22 18:41:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5nlx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":505}' # _entry.id 5NLX # _exptl.entry_id 5NLX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 337.336 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5NLX _cell.length_a 40.33 _cell.length_b 180.07 _cell.length_c 142.66 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NLX _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 80 A CYS 80 1_555 A SG CYS 168 A CYS 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 83 A CYS 83 1_555 A SG CYS 155 A CYS 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? disulf ? disulf3 A SG CYS 86 A CYS 86 1_555 A SG CYS 175 A CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? disulf ? disulf4 A SG CYS 364 A CYS 364 1_555 A SG CYS 367 A CYS 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc1 A OD1 ASP 61 A ASP 61 1_555 E NA NA . A NA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? metalc ? metalc2 A OG SER 100 A SER 100 1_555 E NA NA . A NA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.586 ? metalc ? metalc3 E NA NA . A NA 504 1_555 J O HOH . A HOH 615 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? metalc ? metalc4 E NA NA . A NA 504 1_555 J O HOH . A HOH 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc5 E NA NA . A NA 504 1_555 J O HOH . A HOH 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? # _chem_comp.formula 'C16 H15 N7 O2' _chem_comp.formula_weight 337.336 _chem_comp.id ZMA _chem_comp.mon_nstd_flag . _chem_comp.name 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C7 C1 ZMA doub 506 n y C1 C2 ZMA sing 507 n y C1 H1 ZMA sing 508 n n C2 C3 ZMA doub 509 n y C2 H2 ZMA sing 510 n n C5 C3 ZMA sing 511 n y C3 O4 ZMA sing 512 n n O4 HO4 ZMA sing 513 n n C6 C5 ZMA doub 514 n y C5 H5 ZMA sing 515 n n C7 C6 ZMA sing 516 n y C6 H6 ZMA sing 517 n n C8 C7 ZMA sing 518 n n C9 C8 ZMA sing 519 n n C8 H8 ZMA sing 520 n n C8 H8A ZMA sing 521 n n N10 C9 ZMA sing 522 n n C9 H9 ZMA sing 523 n n C9 H9A ZMA sing 524 n n C11 N10 ZMA sing 525 n n N10 HN10 ZMA sing 526 n n N12 C11 ZMA doub 527 n y C11 N13 ZMA sing 528 n y C18 N12 ZMA sing 529 n y C14 N13 ZMA doub 530 n y N16 C14 ZMA sing 531 n y C14 N15 ZMA sing 532 n n N15 HN15 ZMA sing 533 n n N15 HN1A ZMA sing 534 n n N17 N16 ZMA sing 535 n y C18 N16 ZMA sing 536 n y C20 N17 ZMA doub 537 n y N19 C18 ZMA doub 538 n y C20 N19 ZMA sing 539 n y C21 C20 ZMA sing 540 n y C22 C21 ZMA doub 541 n y O25 C21 ZMA sing 542 n y C23 C22 ZMA sing 543 n y C22 H22 ZMA sing 544 n n C23 C24 ZMA doub 545 n y C23 H23 ZMA sing 546 n n C24 O25 ZMA sing 547 n y C24 H24 ZMA sing 548 n n # _atom_sites.entry_id 5NLX _atom_sites.fract_transf_matrix[1][1] 0.024795 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005553 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00701 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OLA A 1 501 1 OLA OLA . C 2 OLA A 1 502 2 OLA OLA . D 2 OLA A 1 503 3 OLA OLA . E 3 NA A 1 504 1 NA NA . F 4 ZMA A 1 505 1 ZMA ZMA . G 5 CLR A 1 506 1 CLR XXX . H 5 CLR A 1 507 2 CLR XXX . I 5 CLR A 1 508 3 CLR XXX . J 6 HOH A 1 601 15 HOH HOH . J 6 HOH A 2 602 12 HOH HOH . J 6 HOH A 3 603 23 HOH HOH . J 6 HOH A 4 604 22 HOH HOH . J 6 HOH A 5 605 17 HOH HOH . J 6 HOH A 6 606 5 HOH HOH . J 6 HOH A 7 607 11 HOH HOH . J 6 HOH A 8 608 14 HOH HOH . J 6 HOH A 9 609 7 HOH HOH . J 6 HOH A 10 610 19 HOH HOH . J 6 HOH A 11 611 1 HOH HOH . J 6 HOH A 12 612 3 HOH HOH . J 6 HOH A 13 613 2 HOH HOH . J 6 HOH A 14 614 20 HOH HOH . J 6 HOH A 15 615 29 HOH HOH . J 6 HOH A 16 616 6 HOH HOH . J 6 HOH A 17 617 31 HOH HOH . J 6 HOH A 18 618 27 HOH HOH . J 6 HOH A 19 619 13 HOH HOH . J 6 HOH A 20 620 9 HOH HOH . J 6 HOH A 21 621 8 HOH HOH . J 6 HOH A 22 622 4 HOH HOH . J 6 HOH A 23 623 18 HOH HOH . J 6 HOH A 24 624 10 HOH HOH . J 6 HOH A 25 625 33 HOH HOH . J 6 HOH A 26 626 32 HOH HOH . J 6 HOH A 27 627 24 HOH HOH . J 6 HOH A 28 628 26 HOH HOH . J 6 HOH A 29 629 16 HOH HOH . J 6 HOH A 30 630 30 HOH HOH . J 6 HOH A 31 631 21 HOH HOH . J 6 HOH A 32 632 25 HOH HOH . J 6 HOH A 33 633 28 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 ZMA . . . F 4 1.406 103.424 56.371 1 63.03 ? C1 ZMA 505 A 1 HETATM 2 C C2 ZMA . . . F 4 1.105 104.768 56.235 1 61.38 ? C2 ZMA 505 A 1 HETATM 3 C C3 ZMA . . . F 4 -0.095 105.145 55.647 1 60.9 ? C3 ZMA 505 A 1 HETATM 4 O O4 ZMA . . . F 4 -0.358 106.48 55.484 1 67.49 ? O4 ZMA 505 A 1 HETATM 5 C C5 ZMA . . . F 4 -0.983 104.172 55.197 1 50.82 ? C5 ZMA 505 A 1 HETATM 6 C C6 ZMA . . . F 4 -0.65 102.831 55.314 1 50.89 ? C6 ZMA 505 A 1 HETATM 7 C C7 ZMA . . . F 4 0.54 102.438 55.901 1 52.13 ? C7 ZMA 505 A 1 HETATM 8 C C8 ZMA . . . F 4 0.946 100.994 55.93 1 48.25 ? C8 ZMA 505 A 1 HETATM 9 C C9 ZMA . . . F 4 1.987 100.741 54.876 1 44.52 ? C9 ZMA 505 A 1 HETATM 10 N N10 ZMA . . . F 4 2.211 99.329 54.656 1 39.46 ? N10 ZMA 505 A 1 HETATM 11 C C11 ZMA . . . F 4 1.333 98.58 54.038 1 37.18 ? C11 ZMA 505 A 1 HETATM 12 N N12 ZMA . . . F 4 1.795 97.297 53.838 1 32.93 ? N12 ZMA 505 A 1 HETATM 13 N N13 ZMA . . . F 4 0.15 99.104 53.612 1 33.5 ? N13 ZMA 505 A 1 HETATM 14 C C14 ZMA . . . F 4 -0.688 98.309 52.962 1 35.07 ? C14 ZMA 505 A 1 HETATM 15 N N15 ZMA . . . F 4 -1.871 98.756 52.522 1 32.55 ? N15 ZMA 505 A 1 HETATM 16 N N16 ZMA . . . F 4 -0.278 97.013 52.72 1 34.16 ? N16 ZMA 505 A 1 HETATM 17 N N17 ZMA . . . F 4 -1.019 96.002 52.209 1 30.28 ? N17 ZMA 505 A 1 HETATM 18 C C18 ZMA . . . F 4 0.948 96.546 53.124 1 33.5 ? C18 ZMA 505 A 1 HETATM 19 N N19 ZMA . . . F 4 1.056 95.258 52.808 1 29.56 ? N19 ZMA 505 A 1 HETATM 20 C C20 ZMA . . . F 4 -0.163 94.989 52.266 1 30.94 ? C20 ZMA 505 A 1 HETATM 21 C C21 ZMA . . . F 4 -0.45 93.67 51.778 1 24.31 ? C21 ZMA 505 A 1 HETATM 22 C C22 ZMA . . . F 4 0.239 92.555 51.658 1 27.14 ? C22 ZMA 505 A 1 HETATM 23 C C23 ZMA . . . F 4 -0.688 91.562 51.193 1 27.02 ? C23 ZMA 505 A 1 HETATM 24 C C24 ZMA . . . F 4 -1.867 92.164 51.089 1 33.18 ? C24 ZMA 505 A 1 HETATM 25 O O25 ZMA . . . F 4 -1.764 93.474 51.439 1 31.15 ? O25 ZMA 505 A 1 HETATM 26 H H1 ZMA . . . F 4 2.339 103.14 56.856 1 75.64 ? H1 ZMA 505 A 1 HETATM 27 H H2 ZMA . . . F 4 1.804 105.526 56.585 1 73.65 ? H2 ZMA 505 A 1 HETATM 28 H HO4 ZMA . . . F 4 0.422 106.843 54.987 1 80.99 ? HO4 ZMA 505 A 1 HETATM 29 H H5 ZMA . . . F 4 -1.935 104.463 54.754 1 60.99 ? H5 ZMA 505 A 1 HETATM 30 H H6 ZMA . . . F 4 -1.344 102.081 54.936 1 61.07 ? H6 ZMA 505 A 1 HETATM 31 H H8 ZMA . . . F 4 0.071 100.362 55.782 1 57.9 ? H8 ZMA 505 A 1 HETATM 32 H H8A ZMA . . . F 4 1.315 100.736 56.922 1 57.9 ? H8A ZMA 505 A 1 HETATM 33 H H9 ZMA . . . F 4 2.923 101.223 55.156 1 53.42 ? H9 ZMA 505 A 1 HETATM 34 H H9A ZMA . . . F 4 1.692 101.219 53.943 1 53.42 ? H9A ZMA 505 A 1 HETATM 35 H HN10 ZMA . . . F 4 3.066 98.888 54.982 1 47.35 ? HN10 ZMA 505 A 1 HETATM 36 H HN15 ZMA . . . F 4 -2.163 99.711 52.706 1 39.07 ? HN15 ZMA 505 A 1 HETATM 37 H HN1A ZMA . . . F 4 -2.504 98.16 51.999 1 39.07 ? HN1A ZMA 505 A 1 HETATM 38 H H22 ZMA . . . F 4 1.298 92.405 51.866 1 32.57 ? H22 ZMA 505 A 1 HETATM 39 H H23 ZMA . . . F 4 -0.438 90.524 50.977 1 32.43 ? H23 ZMA 505 A 1 HETATM 40 H H24 ZMA . . . F 4 -2.869 91.854 50.795 1 39.81 ? H24 ZMA 505 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 40 #