data_5NM4
#
_model_server_result.job_id            XfgkExdK5DELvPz3EJq1fA 
_model_server_result.datetime_utc      '2024-11-22 23:23:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5nm4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":505}' 
#
_entry.id    5NM4 
#
_exptl.entry_id    5NM4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              282.461 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'OLEIC ACID' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5NM4 
_cell.length_a            39.89 
_cell.length_b            179.15 
_cell.length_c            141.2 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5NM4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 80 A CYS 80 1_555 A SG CYS 168 A CYS 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? 
disulf ? disulf2 A SG CYS 83 A CYS 83 1_555 A SG CYS 155 A CYS 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.971 ? 
disulf ? disulf3 A SG CYS 86 A CYS 86 1_555 A SG CYS 175 A CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? 
disulf ? disulf4 A SG CYS 364 A CYS 364 1_555 A SG CYS 367 A CYS 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
metalc ? metalc1 A OD1 ASP 61 A ASP 61 1_555 G NA NA . A NA 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? 
metalc ? metalc2 A OG SER 100 A SER 100 1_555 G NA NA . A NA 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? 
metalc ? metalc3 G NA NA . A NA 506 1_555 L O HOH . A HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? 
metalc ? metalc4 G NA NA . A NA 506 1_555 L O HOH . A HOH 637 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? 
#
_chem_comp.formula           'C18 H34 O2' 
_chem_comp.formula_weight    282.461 
_chem_comp.id                OLA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'OLEIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 OLA doub 314 n n 
C1 O2 OLA sing 315 n n 
C1 C2 OLA sing 316 n n 
O2 HO2 OLA sing 317 n n 
C2 C3 OLA sing 318 n n 
C2 H21 OLA sing 319 n n 
C2 H22 OLA sing 320 n n 
C3 C4 OLA sing 321 n n 
C3 H31 OLA sing 322 n n 
C3 H32 OLA sing 323 n n 
C4 C5 OLA sing 324 n n 
C4 H41 OLA sing 325 n n 
C4 H42 OLA sing 326 n n 
C5 C6 OLA sing 327 n n 
C5 H51 OLA sing 328 n n 
C5 H52 OLA sing 329 n n 
C6 C7 OLA sing 330 n n 
C6 H61 OLA sing 331 n n 
C6 H62 OLA sing 332 n n 
C7 C8 OLA sing 333 n n 
C7 H71 OLA sing 334 n n 
C7 H72 OLA sing 335 n n 
C8 C9 OLA sing 336 n n 
C8 H81 OLA sing 337 n n 
C8 H82 OLA sing 338 n n 
C9 C10 OLA doub 339 z n 
C9 H9 OLA sing 340 n n 
C10 C11 OLA sing 341 n n 
C10 H10 OLA sing 342 n n 
C11 C12 OLA sing 343 n n 
C11 H111 OLA sing 344 n n 
C11 H112 OLA sing 345 n n 
C12 C13 OLA sing 346 n n 
C12 H121 OLA sing 347 n n 
C12 H122 OLA sing 348 n n 
C13 C14 OLA sing 349 n n 
C13 H131 OLA sing 350 n n 
C13 H132 OLA sing 351 n n 
C14 C15 OLA sing 352 n n 
C14 H141 OLA sing 353 n n 
C14 H142 OLA sing 354 n n 
C15 C16 OLA sing 355 n n 
C15 H151 OLA sing 356 n n 
C15 H152 OLA sing 357 n n 
C16 C17 OLA sing 358 n n 
C16 H161 OLA sing 359 n n 
C16 H162 OLA sing 360 n n 
C17 C18 OLA sing 361 n n 
C17 H171 OLA sing 362 n n 
C17 H172 OLA sing 363 n n 
C18 H181 OLA sing 364 n n 
C18 H182 OLA sing 365 n n 
C18 H183 OLA sing 366 n n 
#
_atom_sites.entry_id                     5NM4 
_atom_sites.fract_transf_matrix[1][1]    0.025069 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005582 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007082 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 OLA A 1 501 1 OLA OLA . 
C 2 OLA A 1 502 2 OLA OLA . 
D 2 OLA A 1 503 3 OLA OLA . 
E 2 OLA A 1 504 4 OLA OLA . 
F 2 OLA A 1 505 5 OLA OLA . 
G 3 NA A 1 506 1 NA NA . 
H 4 ZMA A 1 507 1 ZMA ZMA . 
I 5 CLR A 1 508 1 CLR XXX . 
J 5 CLR A 1 509 2 CLR XXX . 
K 5 CLR A 1 510 3 CLR XXX . 
L 6 HOH A 1 601 50 HOH HOH . 
L 6 HOH A 2 602 37 HOH HOH . 
L 6 HOH A 3 603 47 HOH HOH . 
L 6 HOH A 4 604 57 HOH HOH . 
L 6 HOH A 5 605 16 HOH HOH . 
L 6 HOH A 6 606 20 HOH HOH . 
L 6 HOH A 7 607 52 HOH HOH . 
L 6 HOH A 8 608 53 HOH HOH . 
L 6 HOH A 9 609 21 HOH HOH . 
L 6 HOH A 10 610 15 HOH HOH . 
L 6 HOH A 11 611 26 HOH HOH . 
L 6 HOH A 12 612 43 HOH HOH . 
L 6 HOH A 13 613 9 HOH HOH . 
L 6 HOH A 14 614 2 HOH HOH . 
L 6 HOH A 15 615 3 HOH HOH . 
L 6 HOH A 16 616 34 HOH HOH . 
L 6 HOH A 17 617 32 HOH HOH . 
L 6 HOH A 18 618 4 HOH HOH . 
L 6 HOH A 19 619 41 HOH HOH . 
L 6 HOH A 20 620 18 HOH HOH . 
L 6 HOH A 21 621 23 HOH HOH . 
L 6 HOH A 22 622 39 HOH HOH . 
L 6 HOH A 23 623 8 HOH HOH . 
L 6 HOH A 24 624 19 HOH HOH . 
L 6 HOH A 25 625 17 HOH HOH . 
L 6 HOH A 26 626 38 HOH HOH . 
L 6 HOH A 27 627 12 HOH HOH . 
L 6 HOH A 28 628 51 HOH HOH . 
L 6 HOH A 29 629 14 HOH HOH . 
L 6 HOH A 30 630 22 HOH HOH . 
L 6 HOH A 31 631 6 HOH HOH . 
L 6 HOH A 32 632 35 HOH HOH . 
L 6 HOH A 33 633 5 HOH HOH . 
L 6 HOH A 34 634 7 HOH HOH . 
L 6 HOH A 35 635 36 HOH HOH . 
L 6 HOH A 36 636 13 HOH HOH . 
L 6 HOH A 37 637 59 HOH HOH . 
L 6 HOH A 38 638 33 HOH HOH . 
L 6 HOH A 39 639 1 HOH HOH . 
L 6 HOH A 40 640 46 HOH HOH . 
L 6 HOH A 41 641 24 HOH HOH . 
L 6 HOH A 42 642 54 HOH HOH . 
L 6 HOH A 43 643 29 HOH HOH . 
L 6 HOH A 44 644 31 HOH HOH . 
L 6 HOH A 45 645 28 HOH HOH . 
L 6 HOH A 46 646 11 HOH HOH . 
L 6 HOH A 47 647 10 HOH HOH . 
L 6 HOH A 48 648 42 HOH HOH . 
L 6 HOH A 49 649 44 HOH HOH . 
L 6 HOH A 50 650 30 HOH HOH . 
L 6 HOH A 51 651 45 HOH HOH . 
L 6 HOH A 52 652 25 HOH HOH . 
L 6 HOH A 53 653 48 HOH HOH . 
L 6 HOH A 54 654 40 HOH HOH . 
L 6 HOH A 55 655 55 HOH HOH . 
L 6 HOH A 56 656 58 HOH HOH . 
L 6 HOH A 57 657 27 HOH HOH . 
L 6 HOH A 58 658 56 HOH HOH . 
L 6 HOH A 59 659 49 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 OLA . . . F 2 15.749 106.444 57.509 1 175.17 ? C1 OLA 505 A 1 
HETATM 2 O O1 OLA . . . F 2 16.697 107.092 56.984 1 177.07 ? O1 OLA 505 A 1 
HETATM 3 O O2 OLA . . . F 2 14.676 107.027 57.821 1 175.92 ? O2 OLA 505 A 1 
HETATM 4 C C2 OLA . . . F 2 15.899 104.939 57.773 1 171.92 ? C2 OLA 505 A 1 
HETATM 5 C C3 OLA . . . F 2 17.055 104.396 56.931 1 169.5 ? C3 OLA 505 A 1 
HETATM 6 C C4 OLA . . . F 2 17.406 102.977 57.416 1 167.69 ? C4 OLA 505 A 1 
HETATM 7 C C5 OLA . . . F 2 16.358 101.99 56.894 1 165.17 ? C5 OLA 505 A 1 
HETATM 8 C C6 OLA . . . F 2 15.931 101.006 58.009 1 161.43 ? C6 OLA 505 A 1 
HETATM 9 C C7 OLA . . . F 2 16.96 99.868 58.136 1 156.39 ? C7 OLA 505 A 1 
HETATM 10 C C8 OLA . . . F 2 16.349 98.653 58.882 1 150.39 ? C8 OLA 505 A 1 
HETATM 11 C C9 OLA . . . F 2 16.919 97.367 58.258 1 143.89 ? C9 OLA 505 A 1 
HETATM 12 C C10 OLA . . . F 2 16.715 96.173 58.807 1 137.24 ? C10 OLA 505 A 1 
HETATM 13 C C11 OLA . . . F 2 15.891 96.023 60.1 1 130.21 ? C11 OLA 505 A 1 
HETATM 14 C C12 OLA . . . F 2 15.992 94.602 60.706 1 122.52 ? C12 OLA 505 A 1 
HETATM 15 C C13 OLA . . . F 2 17.324 93.907 60.396 1 115.12 ? C13 OLA 505 A 1 
HETATM 16 C C14 OLA . . . F 2 17.481 92.682 61.313 1 110.43 ? C14 OLA 505 A 1 
HETATM 17 H H21 OLA . . . F 2 16.085 104.791 58.713 1 206.3 ? H21 OLA 505 A 1 
HETATM 18 H H22 OLA . . . F 2 15.078 104.483 57.529 1 206.3 ? H22 OLA 505 A 1 
HETATM 19 H H31 OLA . . . F 2 16.791 104.365 55.998 1 203.4 ? H31 OLA 505 A 1 
HETATM 20 H H32 OLA . . . F 2 17.828 104.974 57.03 1 203.4 ? H32 OLA 505 A 1 
HETATM 21 H H41 OLA . . . F 2 17.413 102.958 58.386 1 201.23 ? H41 OLA 505 A 1 
HETATM 22 H H42 OLA . . . F 2 18.282 102.727 57.081 1 201.23 ? H42 OLA 505 A 1 
HETATM 23 H H51 OLA . . . F 2 16.733 101.49 56.152 1 198.21 ? H51 OLA 505 A 1 
HETATM 24 H H52 OLA . . . F 2 15.581 102.483 56.587 1 198.21 ? H52 OLA 505 A 1 
HETATM 25 H H61 OLA . . . F 2 15.873 101.482 58.852 1 193.72 ? H61 OLA 505 A 1 
HETATM 26 H H62 OLA . . . F 2 15.063 100.632 57.791 1 193.72 ? H62 OLA 505 A 1 
HETATM 27 H H71 OLA . . . F 2 17.239 99.59 57.249 1 187.67 ? H71 OLA 505 A 1 
HETATM 28 H H72 OLA . . . F 2 17.732 100.189 58.628 1 187.67 ? H72 OLA 505 A 1 
HETATM 29 H H81 OLA . . . F 2 16.586 98.693 59.822 1 180.47 ? H81 OLA 505 A 1 
HETATM 30 H H82 OLA . . . F 2 15.384 98.662 58.787 1 180.47 ? H82 OLA 505 A 1 
HETATM 31 H H9 OLA . . . F 2 17.421 97.427 57.477 1 172.67 ? H9 OLA 505 A 1 
HETATM 32 H H10 OLA . . . F 2 17.074 95.417 58.403 1 164.69 ? H10 OLA 505 A 1 
HETATM 33 H H111 OLA . . . F 2 14.961 96.214 59.903 1 156.25 ? H111 OLA 505 A 1 
HETATM 34 H H112 OLA . . . F 2 16.212 96.665 60.752 1 156.25 ? H112 OLA 505 A 1 
HETATM 35 H H121 OLA . . . F 2 15.269 94.061 60.353 1 147.03 ? H121 OLA 505 A 1 
HETATM 36 H H122 OLA . . . F 2 15.891 94.667 61.669 1 147.03 ? H122 OLA 505 A 1 
HETATM 37 H H131 OLA . . . F 2 18.056 94.524 60.552 1 138.15 ? H131 OLA 505 A 1 
HETATM 38 H H132 OLA . . . F 2 17.333 93.621 59.469 1 138.15 ? H132 OLA 505 A 1 
HETATM 39 H H141 OLA . . . F 2 16.882 91.979 61.018 1 132.52 ? H141 OLA 505 A 1 
HETATM 40 H H142 OLA . . . F 2 17.264 92.931 62.225 1 132.52 ? H142 OLA 505 A 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           40 
#