data_5NMM # _model_server_result.job_id tm0iTQmT4vcAjtM4L4Cgkw _model_server_result.datetime_utc '2024-12-23 03:55:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5nmm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":701}' # _entry.id 5NMM # _exptl.entry_id 5NMM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 296.931 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Alpha-Bromo-3-Iodotoluene _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.22 _cell.angle_gamma 90 _cell.entry_id 5NMM _cell.length_a 33.36 _cell.length_b 93.04 _cell.length_c 35.91 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NMM _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H6 Br I' _chem_comp.formula_weight 296.931 _chem_comp.id 8Z5 _chem_comp.mon_nstd_flag . _chem_comp.name Alpha-Bromo-3-Iodotoluene _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 8Z5 sing 1 n n C BR 8Z5 sing 2 n n C6 C1 8Z5 doub 3 n y C6 C5 8Z5 sing 4 n y C1 C2 8Z5 sing 5 n y I C5 8Z5 sing 6 n n C5 C4 8Z5 doub 7 n y C2 C3 8Z5 doub 8 n y C4 C3 8Z5 sing 9 n y C4 H1 8Z5 sing 10 n n C6 H2 8Z5 sing 11 n n C3 H3 8Z5 sing 12 n n C2 H4 8Z5 sing 13 n n C H5 8Z5 sing 14 n n C H6 8Z5 sing 15 n n # _atom_sites.entry_id 5NMM _atom_sites.fract_transf_matrix[1][1] 0.029976 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005404 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010748 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.028296 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 8Z5 A 1 701 1 8Z5 DRG . C 3 HOH A 1 801 20 HOH HOH . C 3 HOH A 2 802 29 HOH HOH . C 3 HOH A 3 803 25 HOH HOH . C 3 HOH A 4 804 24 HOH HOH . C 3 HOH A 5 805 39 HOH HOH . C 3 HOH A 6 806 14 HOH HOH . C 3 HOH A 7 807 40 HOH HOH . C 3 HOH A 8 808 2 HOH HOH . C 3 HOH A 9 809 1 HOH HOH . C 3 HOH A 10 810 42 HOH HOH . C 3 HOH A 11 811 19 HOH HOH . C 3 HOH A 12 812 3 HOH HOH . C 3 HOH A 13 813 21 HOH HOH . C 3 HOH A 14 814 28 HOH HOH . C 3 HOH A 15 815 18 HOH HOH . C 3 HOH A 16 816 15 HOH HOH . C 3 HOH A 17 817 10 HOH HOH . C 3 HOH A 18 818 27 HOH HOH . C 3 HOH A 19 819 6 HOH HOH . C 3 HOH A 20 820 32 HOH HOH . C 3 HOH A 21 821 41 HOH HOH . C 3 HOH A 22 822 33 HOH HOH . C 3 HOH A 23 823 23 HOH HOH . C 3 HOH A 24 824 11 HOH HOH . C 3 HOH A 25 825 8 HOH HOH . C 3 HOH A 26 826 30 HOH HOH . C 3 HOH A 27 827 5 HOH HOH . C 3 HOH A 28 828 7 HOH HOH . C 3 HOH A 29 829 35 HOH HOH . C 3 HOH A 30 830 9 HOH HOH . C 3 HOH A 31 831 17 HOH HOH . C 3 HOH A 32 832 34 HOH HOH . C 3 HOH A 33 833 13 HOH HOH . C 3 HOH A 34 834 38 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 8Z5 . . . B 2 58.46 18.646 78.597 0.43 38.86 ? C4 8Z5 701 A 1 HETATM 2 C C5 8Z5 . . . B 2 59.683 18.876 77.997 0.43 37.15 ? C5 8Z5 701 A 1 HETATM 3 C C6 8Z5 . . . B 2 59.957 20.097 77.397 0.43 43.68 ? C6 8Z5 701 A 1 HETATM 4 C C3 8Z5 . . . B 2 57.499 19.642 78.6 0.43 44.55 ? C3 8Z5 701 A 1 HETATM 5 I I 8Z5 . . . B 2 61.118 17.338 78.009 0.43 49.42 ? I 8Z5 701 A 1 HETATM 6 C C2 8Z5 . . . B 2 57.763 20.864 78.002 0.43 47.45 ? C2 8Z5 701 A 1 HETATM 7 C C1 8Z5 . . . B 2 58.99 21.094 77.401 0.43 45.72 ? C1 8Z5 701 A 1 HETATM 8 C C 8Z5 . . . B 2 59.253 22.417 76.769 0.43 48.83 ? C 8Z5 701 A 1 HETATM 9 BR BR 8Z5 . . . B 2 58.764 23.997 77.781 0.43 90.58 ? BR 8Z5 701 A 1 HETATM 10 H H1 8Z5 . . . B 2 58.275 17.789 79.013 0.43 46.63 ? H1 8Z5 701 A 1 HETATM 11 H H2 8Z5 . . . B 2 60.817 20.253 76.977 0.43 52.42 ? H2 8Z5 701 A 1 HETATM 12 H H3 8Z5 . . . B 2 56.64 19.484 79.019 0.43 53.46 ? H3 8Z5 701 A 1 HETATM 13 H H4 8Z5 . . . B 2 57.089 21.561 78.007 0.43 56.94 ? H4 8Z5 701 A 1 HETATM 14 H H5 8Z5 . . . B 2 60.2 22.469 76.555 0.43 58.59 ? H5 8Z5 701 A 1 HETATM 15 H H6 8Z5 . . . B 2 58.755 22.445 75.935 0.43 58.59 ? H6 8Z5 701 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 222 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #