data_5NNM # _model_server_result.job_id 9q7FT2YgQNhD-jNLwX4kqQ _model_server_result.datetime_utc '2024-11-21 18:05:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5nnm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":502}' # _entry.id 5NNM # _exptl.entry_id 5NNM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.009 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CARBONATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5NNM _cell.length_a 44.577 _cell.length_b 44.577 _cell.length_c 87.847 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NNM _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C O3 -2' _chem_comp.formula_weight 60.009 _chem_comp.id CO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'CARBONATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 CO3 doub 58 n n C O2 CO3 sing 59 n n C O3 CO3 sing 60 n n # _atom_sites.entry_id 5NNM _atom_sites.fract_transf_matrix[1][1] 0.022433 _atom_sites.fract_transf_matrix[1][2] 0.012952 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025904 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011383 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CO3 A 1 101 502 CO3 CO3 . D 2 CO3 B 1 501 501 CO3 CO3 . E 2 CO3 B 1 502 503 CO3 CO3 . F 2 CO3 B 1 503 504 CO3 CO3 . G 3 HOH A 1 201 5 HOH HOH . G 3 HOH A 2 202 15 HOH HOH . G 3 HOH A 3 203 20 HOH HOH . G 3 HOH A 4 204 23 HOH HOH . G 3 HOH A 5 205 24 HOH HOH . G 3 HOH A 6 206 13 HOH HOH . G 3 HOH A 7 207 12 HOH HOH . G 3 HOH A 8 208 1 HOH HOH . G 3 HOH A 9 209 18 HOH HOH . G 3 HOH A 10 210 21 HOH HOH . G 3 HOH A 11 211 9 HOH HOH . G 3 HOH A 12 212 6 HOH HOH . G 3 HOH A 13 213 2 HOH HOH . H 3 HOH B 1 601 22 HOH HOH . H 3 HOH B 2 602 3 HOH HOH . H 3 HOH B 3 603 4 HOH HOH . H 3 HOH B 4 604 14 HOH HOH . H 3 HOH B 5 605 17 HOH HOH . H 3 HOH B 6 606 8 HOH HOH . H 3 HOH B 7 607 7 HOH HOH . H 3 HOH B 8 608 11 HOH HOH . H 3 HOH B 9 609 25 HOH HOH . H 3 HOH B 10 610 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C CO3 . . . E 2 7.392 15.026 2.142 1 67.68 ? C CO3 502 B 1 HETATM 2 O O1 CO3 . . . E 2 6.48 14.278 1.751 1 62.82 ? O1 CO3 502 B 1 HETATM 3 O O2 CO3 . . . E 2 8.539 14.588 2.092 1 60.3 ? O2 CO3 502 B 1 HETATM 4 O O3 CO3 . . . E 2 7.19 16.189 2.556 1 61.91 ? O3 CO3 502 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #