data_5NNT
#
_model_server_result.job_id            d51f5F_NCqR54nTf3QFQdA 
_model_server_result.datetime_utc      '2025-01-10 12:57:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5nnt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":101}' 
#
_entry.id    5NNT 
#
_exptl.entry_id    5NNT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              351.462 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'dodecyl 2-(trimethylammonio)ethyl phosphate' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5NNT 
_cell.length_a            35.209 
_cell.length_b            43.703 
_cell.length_c            54.398 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5NNT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C17 H38 N O4 P' 
_chem_comp.formula_weight    351.462 
_chem_comp.id                DPV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'dodecyl 2-(trimethylammonio)ethyl phosphate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     dodecylphosphocholine 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N C5 DPV sing 58 n n 
N C6 DPV sing 59 n n 
N C7 DPV sing 60 n n 
N C8 DPV sing 61 n n 
P O1P DPV sing 62 n n 
P O2P DPV doub 63 n n 
P O3P DPV sing 64 n n 
P O4P DPV sing 65 n n 
C1 C2 DPV sing 66 n n 
C1 O3P DPV sing 67 n n 
C2 C3 DPV sing 68 n n 
C3 C15 DPV sing 69 n n 
C4 C5 DPV sing 70 n n 
C4 O4P DPV sing 71 n n 
C15 C16 DPV sing 72 n n 
C16 C17 DPV sing 73 n n 
C17 C18 DPV sing 74 n n 
C18 C19 DPV sing 75 n n 
C19 C20 DPV sing 76 n n 
C20 C21 DPV sing 77 n n 
C21 C22 DPV sing 78 n n 
C22 C23 DPV sing 79 n n 
C1 H1 DPV sing 80 n n 
C1 H1A DPV sing 81 n n 
C2 H2 DPV sing 82 n n 
C2 H2A DPV sing 83 n n 
C3 H3 DPV sing 84 n n 
C3 H3A DPV sing 85 n n 
C4 H4 DPV sing 86 n n 
C4 H4A DPV sing 87 n n 
C5 H5 DPV sing 88 n n 
C5 H5A DPV sing 89 n n 
C6 H6 DPV sing 90 n n 
C6 H6A DPV sing 91 n n 
C6 H6B DPV sing 92 n n 
C7 H7 DPV sing 93 n n 
C7 H7A DPV sing 94 n n 
C7 H7B DPV sing 95 n n 
C8 H8 DPV sing 96 n n 
C8 H8A DPV sing 97 n n 
C8 H8B DPV sing 98 n n 
C15 H15 DPV sing 99 n n 
C15 H15A DPV sing 100 n n 
C16 H16 DPV sing 101 n n 
C16 H16A DPV sing 102 n n 
C17 H17 DPV sing 103 n n 
C17 H17A DPV sing 104 n n 
C18 H18 DPV sing 105 n n 
C18 H18A DPV sing 106 n n 
C19 H19 DPV sing 107 n n 
C19 H19A DPV sing 108 n n 
C20 H20 DPV sing 109 n n 
C20 H20A DPV sing 110 n n 
C21 H21 DPV sing 111 n n 
C21 H21A DPV sing 112 n n 
C22 H22 DPV sing 113 n n 
C22 H22A DPV sing 114 n n 
C23 H23 DPV sing 115 n n 
C23 H23A DPV sing 116 n n 
C23 H23B DPV sing 117 n n 
#
_atom_sites.entry_id                     5NNT 
_atom_sites.fract_transf_matrix[1][1]    0.028402 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022882 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018383 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 DPV A 1 101 1 DPV DPV . 
D 2 DPV B 1 101 2 DPV DPV . 
E 3 HOH A 1 201 8 HOH HOH . 
E 3 HOH A 2 202 4 HOH HOH . 
E 3 HOH A 3 203 9 HOH HOH . 
F 3 HOH B 1 201 6 HOH HOH . 
F 3 HOH B 2 202 10 HOH HOH . 
F 3 HOH B 3 203 3 HOH HOH . 
F 3 HOH B 4 204 5 HOH HOH . 
F 3 HOH B 5 205 2 HOH HOH . 
F 3 HOH B 6 206 11 HOH HOH . 
F 3 HOH B 7 207 7 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N DPV . . . C 2 -2.069 20.42 0.103 1 123.62 ? N DPV 101 A 1 
HETATM 2 P P DPV . . . C 2 0.928 17.895 1.806 1 103.26 ? P DPV 101 A 1 
HETATM 3 C C1 DPV . . . C 2 2.957 19.177 2.88 1 76.89 ? C1 DPV 101 A 1 
HETATM 4 C C2 DPV . . . C 2 3.502 20.598 3.036 1 73.3 ? C2 DPV 101 A 1 
HETATM 5 C C3 DPV . . . C 2 2.883 21.424 4.166 1 68.97 ? C3 DPV 101 A 1 
HETATM 6 C C4 DPV . . . C 2 -1.018 18.11 -0.005 1 106.87 ? C4 DPV 101 A 1 
HETATM 7 C C5 DPV . . . C 2 -1.555 19.33 -0.76 1 120.49 ? C5 DPV 101 A 1 
HETATM 8 C C6 DPV . . . C 2 -2.835 21.334 -0.751 1 124.36 ? C6 DPV 101 A 1 
HETATM 9 C C7 DPV . . . C 2 -2.958 19.921 1.167 1 127.4 ? C7 DPV 101 A 1 
HETATM 10 C C8 DPV . . . C 2 -0.988 21.246 0.675 1 126.85 ? C8 DPV 101 A 1 
HETATM 11 C C15 DPV . . . C 2 2.252 20.594 5.278 1 62.34 ? C15 DPV 101 A 1 
HETATM 12 C C16 DPV . . . C 2 1.932 21.482 6.476 1 60.41 ? C16 DPV 101 A 1 
HETATM 13 C C17 DPV . . . C 2 1.082 20.759 7.516 1 58.9 ? C17 DPV 101 A 1 
HETATM 14 C C18 DPV . . . C 2 1.941 20.077 8.576 1 32.22 ? C18 DPV 101 A 1 
HETATM 15 C C19 DPV . . . C 2 1.077 19.539 9.713 1 41.01 ? C19 DPV 101 A 1 
HETATM 16 O O1P DPV . . . C 2 1.801 17.519 0.631 1 92.86 ? O1P DPV 101 A 1 
HETATM 17 C C20 DPV . . . C 2 0.983 20.506 10.892 1 31.88 ? C20 DPV 101 A 1 
HETATM 18 C C21 DPV . . . C 2 1.391 19.818 12.19 1 55.63 ? C21 DPV 101 A 1 
HETATM 19 C C22 DPV . . . C 2 1.543 20.815 13.334 1 38.68 ? C22 DPV 101 A 1 
HETATM 20 C C23 DPV . . . C 2 0.202 21.154 13.948 1 65.75 ? C23 DPV 101 A 1 
HETATM 21 O O2P DPV . . . C 2 0.595 16.861 2.857 1 93.12 ? O2P DPV 101 A 1 
HETATM 22 O O3P DPV . . . C 2 1.579 19.19 2.517 1 67.84 ? O3P DPV 101 A 1 
HETATM 23 O O4P DPV . . . C 2 -0.437 18.512 1.231 1 97.44 ? O4P DPV 101 A 1 
HETATM 24 H H1 DPV . . . C 2 3.53 18.652 2.113 1 92.26 ? H1 DPV 101 A 1 
HETATM 25 H H1A DPV . . . C 2 3.08 18.636 3.82 1 92.26 ? H1A DPV 101 A 1 
HETATM 26 H H2 DPV . . . C 2 4.579 20.539 3.201 1 87.96 ? H2 DPV 101 A 1 
HETATM 27 H H2A DPV . . . C 2 3.351 21.132 2.096 1 87.96 ? H2A DPV 101 A 1 
HETATM 28 H H3 DPV . . . C 2 3.657 22.061 4.599 1 82.77 ? H3 DPV 101 A 1 
HETATM 29 H H3A DPV . . . C 2 2.121 22.082 3.743 1 82.77 ? H3A DPV 101 A 1 
HETATM 30 H H4 DPV . . . C 2 -1.832 17.408 0.184 1 128.25 ? H4 DPV 101 A 1 
HETATM 31 H H4A DPV . . . C 2 -0.267 17.603 -0.615 1 128.25 ? H4A DPV 101 A 1 
HETATM 32 H H5 DPV . . . C 2 -0.758 19.73 -1.39 1 144.59 ? H5 DPV 101 A 1 
HETATM 33 H H5A DPV . . . C 2 -2.357 19.003 -1.425 1 144.59 ? H5A DPV 101 A 1 
HETATM 34 H H6 DPV . . . C 2 -3.638 20.809 -1.199 1 149.23 ? H6 DPV 101 A 1 
HETATM 35 H H6A DPV . . . C 2 -2.203 21.725 -1.506 1 149.23 ? H6A DPV 101 A 1 
HETATM 36 H H6B DPV . . . C 2 -3.217 22.128 -0.164 1 149.23 ? H6B DPV 101 A 1 
HETATM 37 H H7 DPV . . . C 2 -2.426 19.242 1.781 1 152.88 ? H7 DPV 101 A 1 
HETATM 38 H H7A DPV . . . C 2 -3.298 20.735 1.753 1 152.88 ? H7A DPV 101 A 1 
HETATM 39 H H7B DPV . . . C 2 -3.788 19.428 0.731 1 152.88 ? H7B DPV 101 A 1 
HETATM 40 H H8 DPV . . . C 2 -0.531 21.812 -0.095 1 152.22 ? H8 DPV 101 A 1 
HETATM 41 H H8A DPV . . . C 2 -0.266 20.617 1.127 1 152.22 ? H8A DPV 101 A 1 
HETATM 42 H H8B DPV . . . C 2 -1.392 21.901 1.402 1 152.22 ? H8B DPV 101 A 1 
HETATM 43 H H15 DPV . . . C 2 1.336 20.126 4.912 1 74.81 ? H15 DPV 101 A 1 
HETATM 44 H H15A DPV . . . C 2 2.94 19.802 5.581 1 74.81 ? H15A DPV 101 A 1 
HETATM 45 H H16 DPV . . . C 2 2.864 21.811 6.939 1 72.49 ? H16 DPV 101 A 1 
HETATM 46 H H16A DPV . . . C 2 1.4 22.372 6.133 1 72.49 ? H16A DPV 101 A 1 
HETATM 47 H H17 DPV . . . C 2 0.462 20.01 7.018 1 70.68 ? H17 DPV 101 A 1 
HETATM 48 H H17A DPV . . . C 2 0.415 21.476 7.999 1 70.68 ? H17A DPV 101 A 1 
HETATM 49 H H18 DPV . . . C 2 2.664 20.791 8.974 1 38.66 ? H18 DPV 101 A 1 
HETATM 50 H H18A DPV . . . C 2 2.497 19.254 8.121 1 38.66 ? H18A DPV 101 A 1 
HETATM 51 H H19 DPV . . . C 2 1.492 18.591 10.06 1 49.21 ? H19 DPV 101 A 1 
HETATM 52 H H19A DPV . . . C 2 0.072 19.339 9.334 1 49.21 ? H19A DPV 101 A 1 
HETATM 53 H H20 DPV . . . C 2 -0.041 20.875 10.981 1 38.25 ? H20 DPV 101 A 1 
HETATM 54 H H20A DPV . . . C 2 1.635 21.364 10.713 1 38.25 ? H20A DPV 101 A 1 
HETATM 55 H H21 DPV . . . C 2 2.337 19.294 12.039 1 66.76 ? H21 DPV 101 A 1 
HETATM 56 H H21A DPV . . . C 2 0.637 19.074 12.457 1 66.76 ? H21A DPV 101 A 1 
HETATM 57 H H22 DPV . . . C 2 2.012 21.727 12.96 1 46.42 ? H22 DPV 101 A 1 
HETATM 58 H H22A DPV . . . C 2 2.196 20.392 14.099 1 46.42 ? H22A DPV 101 A 1 
HETATM 59 H H23 DPV . . . C 2 -0.427 21.58 13.21 1 78.91 ? H23 DPV 101 A 1 
HETATM 60 H H23A DPV . . . C 2 0.34 21.847 14.737 1 78.91 ? H23A DPV 101 A 1 
HETATM 61 H H23B DPV . . . C 2 -0.246 20.272 14.327 1 78.91 ? H23B DPV 101 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           61 
#