data_5NOT # _model_server_result.job_id LCqaHxoLXvTYg3s3w88Nuw _model_server_result.datetime_utc '2024-10-19 15:25:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5not # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5NOT # _exptl.entry_id 5NOT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 129.548 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-chloranylpyrimidin-5-amine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5NOT _cell.length_a 42.48 _cell.length_b 54.4 _cell.length_c 86.13 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NOT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C4 H4 Cl N3' _chem_comp.formula_weight 129.548 _chem_comp.id 938 _chem_comp.mon_nstd_flag . _chem_comp.name 4-chloranylpyrimidin-5-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 N1 938 doub 1 n y C2 N2 938 sing 2 n y N1 C1 938 sing 3 n y N2 C3 938 doub 4 n y C1 C 938 doub 5 n y C3 C 938 sing 6 n y C3 CL 938 sing 7 n n C N 938 sing 8 n n C1 H1 938 sing 9 n n C2 H2 938 sing 10 n n N H3 938 sing 11 n n N H4 938 sing 12 n n # _atom_sites.entry_id 5NOT _atom_sites.fract_transf_matrix[1][1] 0.02354 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018382 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01161 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 938 A 1 201 1 938 L56 . C 2 938 A 1 202 2 938 L56 . D 3 HOH A 1 301 134 HOH HOH . D 3 HOH A 2 302 151 HOH HOH . D 3 HOH A 3 303 149 HOH HOH . D 3 HOH A 4 304 91 HOH HOH . D 3 HOH A 5 305 117 HOH HOH . D 3 HOH A 6 306 143 HOH HOH . D 3 HOH A 7 307 70 HOH HOH . D 3 HOH A 8 308 89 HOH HOH . D 3 HOH A 9 309 62 HOH HOH . D 3 HOH A 10 310 99 HOH HOH . D 3 HOH A 11 311 81 HOH HOH . D 3 HOH A 12 312 146 HOH HOH . D 3 HOH A 13 313 111 HOH HOH . D 3 HOH A 14 314 106 HOH HOH . D 3 HOH A 15 315 17 HOH HOH . D 3 HOH A 16 316 35 HOH HOH . D 3 HOH A 17 317 83 HOH HOH . D 3 HOH A 18 318 10 HOH HOH . D 3 HOH A 19 319 122 HOH HOH . D 3 HOH A 20 320 123 HOH HOH . D 3 HOH A 21 321 121 HOH HOH . D 3 HOH A 22 322 22 HOH HOH . D 3 HOH A 23 323 33 HOH HOH . D 3 HOH A 24 324 85 HOH HOH . D 3 HOH A 25 325 131 HOH HOH . D 3 HOH A 26 326 138 HOH HOH . D 3 HOH A 27 327 55 HOH HOH . D 3 HOH A 28 328 34 HOH HOH . D 3 HOH A 29 329 12 HOH HOH . D 3 HOH A 30 330 5 HOH HOH . D 3 HOH A 31 331 101 HOH HOH . D 3 HOH A 32 332 4 HOH HOH . D 3 HOH A 33 333 3 HOH HOH . D 3 HOH A 34 334 61 HOH HOH . D 3 HOH A 35 335 104 HOH HOH . D 3 HOH A 36 336 51 HOH HOH . D 3 HOH A 37 337 6 HOH HOH . D 3 HOH A 38 338 67 HOH HOH . D 3 HOH A 39 339 75 HOH HOH . D 3 HOH A 40 340 15 HOH HOH . D 3 HOH A 41 341 139 HOH HOH . D 3 HOH A 42 342 57 HOH HOH . D 3 HOH A 43 343 77 HOH HOH . D 3 HOH A 44 344 20 HOH HOH . D 3 HOH A 45 345 87 HOH HOH . D 3 HOH A 46 346 94 HOH HOH . D 3 HOH A 47 347 47 HOH HOH . D 3 HOH A 48 348 25 HOH HOH . D 3 HOH A 49 349 9 HOH HOH . D 3 HOH A 50 350 76 HOH HOH . D 3 HOH A 51 351 86 HOH HOH . D 3 HOH A 52 352 27 HOH HOH . D 3 HOH A 53 353 38 HOH HOH . D 3 HOH A 54 354 102 HOH HOH . D 3 HOH A 55 355 118 HOH HOH . D 3 HOH A 56 356 135 HOH HOH . D 3 HOH A 57 357 42 HOH HOH . D 3 HOH A 58 358 50 HOH HOH . D 3 HOH A 59 359 124 HOH HOH . D 3 HOH A 60 360 45 HOH HOH . D 3 HOH A 61 361 8 HOH HOH . D 3 HOH A 62 362 136 HOH HOH . D 3 HOH A 63 363 48 HOH HOH . D 3 HOH A 64 364 39 HOH HOH . D 3 HOH A 65 365 52 HOH HOH . D 3 HOH A 66 366 49 HOH HOH . D 3 HOH A 67 367 31 HOH HOH . D 3 HOH A 68 368 68 HOH HOH . D 3 HOH A 69 369 63 HOH HOH . D 3 HOH A 70 370 119 HOH HOH . D 3 HOH A 71 371 54 HOH HOH . D 3 HOH A 72 372 36 HOH HOH . D 3 HOH A 73 373 127 HOH HOH . D 3 HOH A 74 374 69 HOH HOH . D 3 HOH A 75 375 40 HOH HOH . D 3 HOH A 76 376 28 HOH HOH . D 3 HOH A 77 377 120 HOH HOH . D 3 HOH A 78 378 32 HOH HOH . D 3 HOH A 79 379 132 HOH HOH . D 3 HOH A 80 380 65 HOH HOH . D 3 HOH A 81 381 19 HOH HOH . D 3 HOH A 82 382 13 HOH HOH . D 3 HOH A 83 383 7 HOH HOH . D 3 HOH A 84 384 64 HOH HOH . D 3 HOH A 85 385 11 HOH HOH . D 3 HOH A 86 386 59 HOH HOH . D 3 HOH A 87 387 93 HOH HOH . D 3 HOH A 88 388 74 HOH HOH . D 3 HOH A 89 389 126 HOH HOH . D 3 HOH A 90 390 21 HOH HOH . D 3 HOH A 91 391 2 HOH HOH . D 3 HOH A 92 392 29 HOH HOH . D 3 HOH A 93 393 115 HOH HOH . D 3 HOH A 94 394 18 HOH HOH . D 3 HOH A 95 395 133 HOH HOH . D 3 HOH A 96 396 1 HOH HOH . D 3 HOH A 97 397 41 HOH HOH . D 3 HOH A 98 398 107 HOH HOH . D 3 HOH A 99 399 26 HOH HOH . D 3 HOH A 100 400 66 HOH HOH . D 3 HOH A 101 401 130 HOH HOH . D 3 HOH A 102 402 14 HOH HOH . D 3 HOH A 103 403 150 HOH HOH . D 3 HOH A 104 404 60 HOH HOH . D 3 HOH A 105 405 105 HOH HOH . D 3 HOH A 106 406 43 HOH HOH . D 3 HOH A 107 407 23 HOH HOH . D 3 HOH A 108 408 16 HOH HOH . D 3 HOH A 109 409 125 HOH HOH . D 3 HOH A 110 410 148 HOH HOH . D 3 HOH A 111 411 24 HOH HOH . D 3 HOH A 112 412 58 HOH HOH . D 3 HOH A 113 413 53 HOH HOH . D 3 HOH A 114 414 46 HOH HOH . D 3 HOH A 115 415 154 HOH HOH . D 3 HOH A 116 416 147 HOH HOH . D 3 HOH A 117 417 82 HOH HOH . D 3 HOH A 118 418 90 HOH HOH . D 3 HOH A 119 419 116 HOH HOH . D 3 HOH A 120 420 92 HOH HOH . D 3 HOH A 121 421 37 HOH HOH . D 3 HOH A 122 422 114 HOH HOH . D 3 HOH A 123 423 141 HOH HOH . D 3 HOH A 124 424 96 HOH HOH . D 3 HOH A 125 425 140 HOH HOH . D 3 HOH A 126 426 97 HOH HOH . D 3 HOH A 127 427 112 HOH HOH . D 3 HOH A 128 428 88 HOH HOH . D 3 HOH A 129 429 129 HOH HOH . D 3 HOH A 130 430 72 HOH HOH . D 3 HOH A 131 431 71 HOH HOH . D 3 HOH A 132 432 98 HOH HOH . D 3 HOH A 133 433 84 HOH HOH . D 3 HOH A 134 434 128 HOH HOH . D 3 HOH A 135 435 142 HOH HOH . D 3 HOH A 136 436 95 HOH HOH . D 3 HOH A 137 437 44 HOH HOH . D 3 HOH A 138 438 153 HOH HOH . D 3 HOH A 139 439 79 HOH HOH . D 3 HOH A 140 440 108 HOH HOH . D 3 HOH A 141 441 100 HOH HOH . D 3 HOH A 142 442 73 HOH HOH . D 3 HOH A 143 443 145 HOH HOH . D 3 HOH A 144 444 80 HOH HOH . D 3 HOH A 145 445 103 HOH HOH . D 3 HOH A 146 446 144 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 938 . . . B 2 -18.457 23.636 -5.889 1 38.36 ? C1 938 201 A 1 HETATM 2 C C2 938 . . . B 2 -19.148 21.613 -6.805 1 34.83 ? C2 938 201 A 1 HETATM 3 C C3 938 . . . B 2 -17.119 21.673 -5.69 1 33.09 ? C3 938 201 A 1 HETATM 4 CL CL 938 . . . B 2 -15.685 20.862 -5.13 1 31.66 ? CL 938 201 A 1 HETATM 5 C C 938 . . . B 2 -17.302 23.019 -5.429 1 36.64 ? C 938 201 A 1 HETATM 6 N N 938 . . . B 2 -16.373 23.721 -4.737 1 35.22 ? N 938 201 A 1 HETATM 7 N N2 938 . . . B 2 -18.037 21.005 -6.366 1 31.13 ? N2 938 201 A 1 HETATM 8 N N1 938 . . . B 2 -19.356 22.915 -6.569 1 41.03 ? N1 938 201 A 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #