data_5NQE
#
_model_server_result.job_id            xwsVLgltFGDhmJAMjDO_9A 
_model_server_result.datetime_utc      '2024-11-12 20:29:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5nqe 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1901}' 
#
_entry.id    5NQE 
#
_exptl.entry_id    5NQE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              398.431 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3-[[4-[4-(4-fluorophenyl)piperazin-1-yl]-4-oxidanylidene-butanoyl]amino]benzamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          116.42 
_cell.angle_gamma         90 
_cell.entry_id            5NQE 
_cell.length_a            83.43 
_cell.length_b            90.36 
_cell.length_c            80.07 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5NQE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 10 A CYS 1618 1_555 A SG CYS 10 A CYS 1618 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf2 B SG CYS 10 B CYS 1618 1_555 B SG CYS 10 B CYS 1618 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
#
_chem_comp.formula           'C21 H23 F N4 O3' 
_chem_comp.formula_weight    398.431 
_chem_comp.id                94Z 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3-[[4-[4-(4-fluorophenyl)piperazin-1-yl]-4-oxidanylidene-butanoyl]amino]benzamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
NBB CAJ 94Z sing 1 n n 
OAI CAJ 94Z doub 2 n n 
CAJ CAK 94Z sing 3 n n 
CAK CAL 94Z doub 4 n y 
CAK CAA 94Z sing 5 n y 
CAL CAM 94Z sing 6 n y 
CAA CAB 94Z doub 7 n y 
NAN CAM 94Z sing 8 n n 
NAN CAO 94Z sing 9 n n 
CAM CAC 94Z doub 10 n y 
CAP CAO 94Z sing 11 n n 
CAP CAQ 94Z sing 12 n n 
CAO OAD 94Z doub 13 n n 
CAQ CAR 94Z sing 14 n n 
CAB CAC 94Z sing 15 n y 
OBC CAR 94Z doub 16 n n 
CAR NAS 94Z sing 17 n n 
NAS CAT 94Z sing 18 n n 
NAS CAE 94Z sing 19 n n 
CAT CAU 94Z sing 20 n n 
CAE CAF 94Z sing 21 n n 
CAU NAV 94Z sing 22 n n 
CAF NAV 94Z sing 23 n n 
NAV CAW 94Z sing 24 n n 
CAG CAW 94Z doub 25 n y 
CAG CAH 94Z sing 26 n y 
CAW CAX 94Z sing 27 n y 
CAH CAZ 94Z doub 28 n y 
CAX CAY 94Z doub 29 n y 
CAZ CAY 94Z sing 30 n y 
CAZ FBA 94Z sing 31 n n 
CAG H1 94Z sing 32 n n 
CAH H2 94Z sing 33 n n 
CAY H3 94Z sing 34 n n 
CAX H4 94Z sing 35 n n 
CAF H5 94Z sing 36 n n 
CAF H6 94Z sing 37 n n 
CAE H7 94Z sing 38 n n 
CAE H8 94Z sing 39 n n 
CAU H9 94Z sing 40 n n 
CAU H10 94Z sing 41 n n 
CAT H11 94Z sing 42 n n 
CAT H12 94Z sing 43 n n 
CAQ H13 94Z sing 44 n n 
CAQ H14 94Z sing 45 n n 
CAP H15 94Z sing 46 n n 
CAP H16 94Z sing 47 n n 
NAN H17 94Z sing 48 n n 
CAL H18 94Z sing 49 n n 
CAC H19 94Z sing 50 n n 
CAB H20 94Z sing 51 n n 
CAA H21 94Z sing 52 n n 
NBB H22 94Z sing 53 n n 
NBB H23 94Z sing 54 n n 
#
_atom_sites.entry_id                     5NQE 
_atom_sites.fract_transf_matrix[1][1]    0.011986 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005955 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011067 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013946 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 94Z A 1 1901 1 94Z DRG . 
D 2 94Z B 1 1901 2 94Z DRG . 
E 3 HOH A 1 2001 3 HOH HOH . 
E 3 HOH A 2 2002 17 HOH HOH . 
E 3 HOH A 3 2003 4 HOH HOH . 
E 3 HOH A 4 2004 9 HOH HOH . 
E 3 HOH A 5 2005 2 HOH HOH . 
E 3 HOH A 6 2006 15 HOH HOH . 
E 3 HOH A 7 2007 16 HOH HOH . 
F 3 HOH B 1 2001 14 HOH HOH . 
F 3 HOH B 2 2002 12 HOH HOH . 
F 3 HOH B 3 2003 10 HOH HOH . 
F 3 HOH B 4 2004 11 HOH HOH . 
F 3 HOH B 5 2005 1 HOH HOH . 
F 3 HOH B 6 2006 6 HOH HOH . 
F 3 HOH B 7 2007 7 HOH HOH . 
F 3 HOH B 8 2008 8 HOH HOH . 
F 3 HOH B 9 2009 5 HOH HOH . 
F 3 HOH B 10 2010 13 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAG 94Z . . . D 2 0.586 21.848 25.05 1 72.82 ? CAG 94Z 1901 B 1 
HETATM 2 C CAH 94Z . . . D 2 0.376 22.592 26.237 1 74.99 ? CAH 94Z 1901 B 1 
HETATM 3 C CAZ 94Z . . . D 2 0.902 22.134 27.461 1 76.6 ? CAZ 94Z 1901 B 1 
HETATM 4 F FBA 94Z . . . D 2 0.726 22.729 28.492 1 77.74 ? FBA 94Z 1901 B 1 
HETATM 5 C CAY 94Z . . . D 2 1.658 20.948 27.492 1 75.59 ? CAY 94Z 1901 B 1 
HETATM 6 C CAX 94Z . . . D 2 1.87 20.234 26.295 1 73.17 ? CAX 94Z 1901 B 1 
HETATM 7 C CAW 94Z . . . D 2 1.355 20.665 25.056 1 70.36 ? CAW 94Z 1901 B 1 
HETATM 8 N NAV 94Z . . . D 2 1.583 19.926 23.937 1 65.41 ? NAV 94Z 1901 B 1 
HETATM 9 C CAF 94Z . . . D 2 2.985 19.503 23.626 1 63.77 ? CAF 94Z 1901 B 1 
HETATM 10 C CAE 94Z . . . D 2 3.076 18.442 22.465 1 61.86 ? CAE 94Z 1901 B 1 
HETATM 11 C CAU 94Z . . . D 2 0.466 19.518 23.051 1 61.93 ? CAU 94Z 1901 B 1 
HETATM 12 C CAT 94Z . . . D 2 0.645 18.065 22.687 1 60.77 ? CAT 94Z 1901 B 1 
HETATM 13 N NAS 94Z . . . D 2 1.836 18.084 21.803 1 60.84 ? NAS 94Z 1901 B 1 
HETATM 14 C CAR 94Z . . . D 2 1.641 17.824 20.479 1 61.34 ? CAR 94Z 1901 B 1 
HETATM 15 O OBC 94Z . . . D 2 0.536 17.522 20.042 1 65.06 ? OBC 94Z 1901 B 1 
HETATM 16 C CAQ 94Z . . . D 2 2.108 18.515 19.314 1 57.7 ? CAQ 94Z 1901 B 1 
HETATM 17 C CAP 94Z . . . D 2 1.86 19.837 18.798 1 53.89 ? CAP 94Z 1901 B 1 
HETATM 18 C CAO 94Z . . . D 2 2.737 20.89 19.133 1 50.67 ? CAO 94Z 1901 B 1 
HETATM 19 O OAD 94Z . . . D 2 3.419 20.806 20.091 1 51.1 ? OAD 94Z 1901 B 1 
HETATM 20 N NAN 94Z . . . D 2 2.683 21.834 18.241 1 47.11 ? NAN 94Z 1901 B 1 
HETATM 21 C CAM 94Z . . . D 2 3.373 22.951 18.24 1 40.37 ? CAM 94Z 1901 B 1 
HETATM 22 C CAL 94Z . . . D 2 3.438 23.351 16.953 1 33.73 ? CAL 94Z 1901 B 1 
HETATM 23 C CAC 94Z . . . D 2 3.958 23.72 19.331 1 36.66 ? CAC 94Z 1901 B 1 
HETATM 24 C CAB 94Z . . . D 2 4.599 24.902 19.01 1 33.43 ? CAB 94Z 1901 B 1 
HETATM 25 C CAA 94Z . . . D 2 4.644 25.3 17.677 1 30.81 ? CAA 94Z 1901 B 1 
HETATM 26 C CAK 94Z . . . D 2 4.053 24.518 16.654 1 29.81 ? CAK 94Z 1901 B 1 
HETATM 27 C CAJ 94Z . . . D 2 4.068 24.866 15.377 1 26.84 ? CAJ 94Z 1901 B 1 
HETATM 28 O OAI 94Z . . . D 2 5.072 25.264 15.003 1 25.33 ? OAI 94Z 1901 B 1 
HETATM 29 N NBB 94Z . . . D 2 3.019 24.735 14.611 1 25.36 ? NBB 94Z 1901 B 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    24 
_model_server_stats.query_time_ms           378 
_model_server_stats.encode_time_ms          12 
_model_server_stats.element_count           29 
#