data_5NRS # _model_server_result.job_id G6VvUGhxXhTiJcduAYt5DA _model_server_result.datetime_utc '2024-10-18 04:23:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5nrs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":403}' # _entry.id 5NRS # _exptl.entry_id 5NRS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 177.241 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2~{S})-1-[2-hydroxyethyl-[(2~{S})-2-oxidanylpropyl]amino]propan-2-ol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5NRS _cell.length_a 74.93 _cell.length_b 74.93 _cell.length_c 157.47 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NRS _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 I N N # _chem_comp.formula 'C8 H19 N O3' _chem_comp.formula_weight 177.241 _chem_comp.id 962 _chem_comp.mon_nstd_flag . _chem_comp.name (2~{S})-1-[2-hydroxyethyl-[(2~{S})-2-oxidanylpropyl]amino]propan-2-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O12 C11 962 sing 1 n n C11 C10 962 sing 2 n n C10 N1 962 sing 3 n n N1 C6 962 sing 4 n n N1 C2 962 sing 5 n n O8 C7 962 sing 6 n n C7 C6 962 sing 7 n n C7 C9 962 sing 8 n n C5 C3 962 sing 9 n n C2 C3 962 sing 10 n n C3 O4 962 sing 11 n n O12 H1 962 sing 12 n n C11 H2 962 sing 13 n n C11 H3 962 sing 14 n n C10 H4 962 sing 15 n n C10 H5 962 sing 16 n n C6 H7 962 sing 17 n n C6 H8 962 sing 18 n n C7 H9 962 sing 19 n n C9 H10 962 sing 20 n n C9 H11 962 sing 21 n n C9 H12 962 sing 22 n n O8 H13 962 sing 23 n n C2 H14 962 sing 24 n n C2 H15 962 sing 25 n n C3 H16 962 sing 26 n n O4 H17 962 sing 27 n n C5 H18 962 sing 28 n n C5 H19 962 sing 29 n n C5 H20 962 sing 30 n n # _atom_sites.entry_id 5NRS _atom_sites.fract_transf_matrix[1][1] 0.013346 _atom_sites.fract_transf_matrix[1][2] 0.007705 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01541 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00635 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 401 1 SO4 SO4 . D 2 SO4 A 1 402 3 SO4 SO4 . E 3 962 A 1 403 2 962 7NN . F 2 SO4 B 1 401 2 SO4 SO4 . G 2 SO4 B 1 402 4 SO4 SO4 . H 2 SO4 B 1 403 5 SO4 SO4 . I 3 962 B 1 404 1 962 7NN . J 4 HOH A 1 501 3 HOH HOH . J 4 HOH A 2 502 2 HOH HOH . J 4 HOH A 3 503 7 HOH HOH . J 4 HOH A 4 504 54 HOH HOH . J 4 HOH A 5 505 36 HOH HOH . J 4 HOH A 6 506 35 HOH HOH . J 4 HOH A 7 507 37 HOH HOH . J 4 HOH A 8 508 42 HOH HOH . J 4 HOH A 9 509 4 HOH HOH . J 4 HOH A 10 510 30 HOH HOH . J 4 HOH A 11 511 1 HOH HOH . J 4 HOH A 12 512 10 HOH HOH . J 4 HOH A 13 513 33 HOH HOH . J 4 HOH A 14 514 22 HOH HOH . J 4 HOH A 15 515 17 HOH HOH . J 4 HOH A 16 516 13 HOH HOH . J 4 HOH A 17 517 16 HOH HOH . J 4 HOH A 18 518 26 HOH HOH . J 4 HOH A 19 519 25 HOH HOH . J 4 HOH A 20 520 41 HOH HOH . J 4 HOH A 21 521 28 HOH HOH . J 4 HOH A 22 522 31 HOH HOH . J 4 HOH A 23 523 23 HOH HOH . J 4 HOH A 24 524 6 HOH HOH . J 4 HOH A 25 525 20 HOH HOH . J 4 HOH A 26 526 19 HOH HOH . J 4 HOH A 27 527 11 HOH HOH . J 4 HOH A 28 528 15 HOH HOH . J 4 HOH A 29 529 44 HOH HOH . J 4 HOH A 30 530 27 HOH HOH . J 4 HOH A 31 531 59 HOH HOH . J 4 HOH A 32 532 9 HOH HOH . J 4 HOH A 33 533 52 HOH HOH . J 4 HOH A 34 534 45 HOH HOH . J 4 HOH A 35 535 50 HOH HOH . J 4 HOH A 36 536 40 HOH HOH . J 4 HOH A 37 537 57 HOH HOH . J 4 HOH A 38 538 34 HOH HOH . J 4 HOH A 39 539 12 HOH HOH . J 4 HOH A 40 540 55 HOH HOH . J 4 HOH A 41 541 39 HOH HOH . J 4 HOH A 42 542 58 HOH HOH . K 4 HOH B 1 501 47 HOH HOH . K 4 HOH B 2 502 56 HOH HOH . K 4 HOH B 3 503 49 HOH HOH . K 4 HOH B 4 504 21 HOH HOH . K 4 HOH B 5 505 29 HOH HOH . K 4 HOH B 6 506 38 HOH HOH . K 4 HOH B 7 507 5 HOH HOH . K 4 HOH B 8 508 48 HOH HOH . K 4 HOH B 9 509 60 HOH HOH . K 4 HOH B 10 510 8 HOH HOH . K 4 HOH B 11 511 43 HOH HOH . K 4 HOH B 12 512 53 HOH HOH . K 4 HOH B 13 513 32 HOH HOH . K 4 HOH B 14 514 18 HOH HOH . K 4 HOH B 15 515 51 HOH HOH . K 4 HOH B 16 516 46 HOH HOH . K 4 HOH B 17 517 14 HOH HOH . K 4 HOH B 18 518 24 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O12 962 . . . E 3 -31.793 9.479 -17.603 1 73.62 ? O12 962 403 A 1 HETATM 2 C C11 962 . . . E 3 -30.544 10.125 -17.326 1 72.91 ? C11 962 403 A 1 HETATM 3 C C10 962 . . . E 3 -29.676 10.271 -18.58 1 70.78 ? C10 962 403 A 1 HETATM 4 N N1 962 . . . E 3 -28.338 10.771 -18.195 1 73.7 ? N1 962 403 A 1 HETATM 5 C C6 962 . . . E 3 -27.271 9.912 -18.75 1 69.5 ? C6 962 403 A 1 HETATM 6 C C7 962 . . . E 3 -26.253 9.686 -17.637 1 71.58 ? C7 962 403 A 1 HETATM 7 C C9 962 . . . E 3 -25.7 8.261 -17.625 1 67.63 ? C9 962 403 A 1 HETATM 8 O O8 962 . . . E 3 -26.902 10.003 -16.399 1 78.23 ? O8 962 403 A 1 HETATM 9 C C2 962 . . . E 3 -28.203 12.111 -18.77 1 63.45 ? C2 962 403 A 1 HETATM 10 C C3 962 . . . E 3 -27.942 13.079 -17.619 1 64.68 ? C3 962 403 A 1 HETATM 11 O O4 962 . . . E 3 -28.232 14.397 -18.085 1 65.02 ? O4 962 403 A 1 HETATM 12 C C5 962 . . . E 3 -28.814 12.829 -16.386 1 74.77 ? C5 962 403 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 244 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 12 #