data_5NRU # _model_server_result.job_id hf18MJ9igQXqItah-UM_xA _model_server_result.datetime_utc '2024-12-02 23:38:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5nru # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 5NRU # _exptl.entry_id 5NRU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5NRU _cell.length_a 99.21 _cell.length_b 99.21 _cell.length_c 106.67 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NRU _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_675 x-y+1,-y+2,-z+1/3 1 0 0 0 -1 0 0 0 -1 0 171.836761 35.556667 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 87 A CYS 74 1_555 A SG CYS 176 A CYS 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc1 A NE2 HIS 36 A HIS 23 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc2 A OD1 ASP 38 A ASP 25 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.862 ? metalc ? metalc3 A OE2 GLU 147 A GLU 134 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.87 ? metalc ? metalc4 A OE1 GLU 147 A GLU 134 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.98 ? metalc ? metalc5 A NE2 HIS 216 A HIS 203 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc6 A NE2 HIS 237 A HIS 224 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc7 B ZN ZN . A ZN 401 1_555 E O HOH . A HOH 618 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5NRU _atom_sites.fract_transf_matrix[1][1] 0.01008 _atom_sites.fract_transf_matrix[1][2] 0.005819 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011639 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009375 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 401 1 ZN ZN . C 2 ZN A 1 402 2 ZN ZN . D 3 CL A 1 403 1 CL CL . E 4 HOH A 1 501 6 HOH HOH . E 4 HOH A 2 502 20 HOH HOH . E 4 HOH A 3 503 12 HOH HOH . E 4 HOH A 4 504 85 HOH HOH . E 4 HOH A 5 505 16 HOH HOH . E 4 HOH A 6 506 99 HOH HOH . E 4 HOH A 7 507 13 HOH HOH . E 4 HOH A 8 508 46 HOH HOH . E 4 HOH A 9 509 39 HOH HOH . E 4 HOH A 10 510 2 HOH HOH . E 4 HOH A 11 511 148 HOH HOH . E 4 HOH A 12 512 44 HOH HOH . E 4 HOH A 13 513 97 HOH HOH . E 4 HOH A 14 514 42 HOH HOH . E 4 HOH A 15 515 1 HOH HOH . E 4 HOH A 16 516 27 HOH HOH . E 4 HOH A 17 517 218 HOH HOH . E 4 HOH A 18 518 52 HOH HOH . E 4 HOH A 19 519 191 HOH HOH . E 4 HOH A 20 520 204 HOH HOH . E 4 HOH A 21 521 203 HOH HOH . E 4 HOH A 22 522 102 HOH HOH . E 4 HOH A 23 523 60 HOH HOH . E 4 HOH A 24 524 32 HOH HOH . E 4 HOH A 25 525 9 HOH HOH . E 4 HOH A 26 526 54 HOH HOH . E 4 HOH A 27 527 72 HOH HOH . E 4 HOH A 28 528 88 HOH HOH . E 4 HOH A 29 529 57 HOH HOH . E 4 HOH A 30 530 4 HOH HOH . E 4 HOH A 31 531 25 HOH HOH . E 4 HOH A 32 532 104 HOH HOH . E 4 HOH A 33 533 136 HOH HOH . E 4 HOH A 34 534 8 HOH HOH . E 4 HOH A 35 535 250 HOH HOH . E 4 HOH A 36 536 150 HOH HOH . E 4 HOH A 37 537 67 HOH HOH . E 4 HOH A 38 538 233 HOH HOH . E 4 HOH A 39 539 152 HOH HOH . E 4 HOH A 40 540 199 HOH HOH . E 4 HOH A 41 541 137 HOH HOH . E 4 HOH A 42 542 164 HOH HOH . E 4 HOH A 43 543 209 HOH HOH . E 4 HOH A 44 544 19 HOH HOH . E 4 HOH A 45 545 108 HOH HOH . E 4 HOH A 46 546 121 HOH HOH . E 4 HOH A 47 547 75 HOH HOH . E 4 HOH A 48 548 79 HOH HOH . E 4 HOH A 49 549 184 HOH HOH . E 4 HOH A 50 550 47 HOH HOH . E 4 HOH A 51 551 23 HOH HOH . E 4 HOH A 52 552 127 HOH HOH . E 4 HOH A 53 553 89 HOH HOH . E 4 HOH A 54 554 11 HOH HOH . E 4 HOH A 55 555 53 HOH HOH . E 4 HOH A 56 556 123 HOH HOH . E 4 HOH A 57 557 114 HOH HOH . E 4 HOH A 58 558 98 HOH HOH . E 4 HOH A 59 559 189 HOH HOH . E 4 HOH A 60 560 106 HOH HOH . E 4 HOH A 61 561 107 HOH HOH . E 4 HOH A 62 562 225 HOH HOH . E 4 HOH A 63 563 115 HOH HOH . E 4 HOH A 64 564 59 HOH HOH . E 4 HOH A 65 565 93 HOH HOH . E 4 HOH A 66 566 128 HOH HOH . E 4 HOH A 67 567 125 HOH HOH . E 4 HOH A 68 568 10 HOH HOH . E 4 HOH A 69 569 50 HOH HOH . E 4 HOH A 70 570 142 HOH HOH . E 4 HOH A 71 571 14 HOH HOH . E 4 HOH A 72 572 212 HOH HOH . E 4 HOH A 73 573 182 HOH HOH . E 4 HOH A 74 574 76 HOH HOH . E 4 HOH A 75 575 38 HOH HOH . E 4 HOH A 76 576 186 HOH HOH . E 4 HOH A 77 577 83 HOH HOH . E 4 HOH A 78 578 111 HOH HOH . E 4 HOH A 79 579 18 HOH HOH . E 4 HOH A 80 580 221 HOH HOH . E 4 HOH A 81 581 48 HOH HOH . E 4 HOH A 82 582 145 HOH HOH . E 4 HOH A 83 583 82 HOH HOH . E 4 HOH A 84 584 81 HOH HOH . E 4 HOH A 85 585 84 HOH HOH . E 4 HOH A 86 586 30 HOH HOH . E 4 HOH A 87 587 208 HOH HOH . E 4 HOH A 88 588 3 HOH HOH . E 4 HOH A 89 589 161 HOH HOH . E 4 HOH A 90 590 118 HOH HOH . E 4 HOH A 91 591 101 HOH HOH . E 4 HOH A 92 592 51 HOH HOH . E 4 HOH A 93 593 15 HOH HOH . E 4 HOH A 94 594 17 HOH HOH . E 4 HOH A 95 595 159 HOH HOH . E 4 HOH A 96 596 62 HOH HOH . E 4 HOH A 97 597 31 HOH HOH . E 4 HOH A 98 598 77 HOH HOH . E 4 HOH A 99 599 122 HOH HOH . E 4 HOH A 100 600 58 HOH HOH . E 4 HOH A 101 601 149 HOH HOH . E 4 HOH A 102 602 5 HOH HOH . E 4 HOH A 103 603 155 HOH HOH . E 4 HOH A 104 604 126 HOH HOH . E 4 HOH A 105 605 33 HOH HOH . E 4 HOH A 106 606 55 HOH HOH . E 4 HOH A 107 607 73 HOH HOH . E 4 HOH A 108 608 49 HOH HOH . E 4 HOH A 109 609 26 HOH HOH . E 4 HOH A 110 610 119 HOH HOH . E 4 HOH A 111 611 40 HOH HOH . E 4 HOH A 112 612 105 HOH HOH . E 4 HOH A 113 613 37 HOH HOH . E 4 HOH A 114 614 202 HOH HOH . E 4 HOH A 115 615 201 HOH HOH . E 4 HOH A 116 616 64 HOH HOH . E 4 HOH A 117 617 56 HOH HOH . E 4 HOH A 118 618 41 HOH HOH . E 4 HOH A 119 619 226 HOH HOH . E 4 HOH A 120 620 28 HOH HOH . E 4 HOH A 121 621 124 HOH HOH . E 4 HOH A 122 622 65 HOH HOH . E 4 HOH A 123 623 192 HOH HOH . E 4 HOH A 124 624 90 HOH HOH . E 4 HOH A 125 625 71 HOH HOH . E 4 HOH A 126 626 21 HOH HOH . E 4 HOH A 127 627 132 HOH HOH . E 4 HOH A 128 628 45 HOH HOH . E 4 HOH A 129 629 185 HOH HOH . E 4 HOH A 130 630 87 HOH HOH . E 4 HOH A 131 631 198 HOH HOH . E 4 HOH A 132 632 35 HOH HOH . E 4 HOH A 133 633 61 HOH HOH . E 4 HOH A 134 634 153 HOH HOH . E 4 HOH A 135 635 146 HOH HOH . E 4 HOH A 136 636 36 HOH HOH . E 4 HOH A 137 637 7 HOH HOH . E 4 HOH A 138 638 70 HOH HOH . E 4 HOH A 139 639 172 HOH HOH . E 4 HOH A 140 640 134 HOH HOH . E 4 HOH A 141 641 253 HOH HOH . E 4 HOH A 142 642 188 HOH HOH . E 4 HOH A 143 643 22 HOH HOH . E 4 HOH A 144 644 95 HOH HOH . E 4 HOH A 145 645 183 HOH HOH . E 4 HOH A 146 646 78 HOH HOH . E 4 HOH A 147 647 162 HOH HOH . E 4 HOH A 148 648 29 HOH HOH . E 4 HOH A 149 649 100 HOH HOH . E 4 HOH A 150 650 69 HOH HOH . E 4 HOH A 151 651 94 HOH HOH . E 4 HOH A 152 652 234 HOH HOH . E 4 HOH A 153 653 249 HOH HOH . E 4 HOH A 154 654 197 HOH HOH . E 4 HOH A 155 655 228 HOH HOH . E 4 HOH A 156 656 180 HOH HOH . E 4 HOH A 157 657 157 HOH HOH . E 4 HOH A 158 658 175 HOH HOH . E 4 HOH A 159 659 129 HOH HOH . E 4 HOH A 160 660 179 HOH HOH . E 4 HOH A 161 661 117 HOH HOH . E 4 HOH A 162 662 229 HOH HOH . E 4 HOH A 163 663 217 HOH HOH . E 4 HOH A 164 664 200 HOH HOH . E 4 HOH A 165 665 160 HOH HOH . E 4 HOH A 166 666 80 HOH HOH . E 4 HOH A 167 667 240 HOH HOH . E 4 HOH A 168 668 222 HOH HOH . E 4 HOH A 169 669 193 HOH HOH . E 4 HOH A 170 670 246 HOH HOH . E 4 HOH A 171 671 206 HOH HOH . E 4 HOH A 172 672 144 HOH HOH . E 4 HOH A 173 673 216 HOH HOH . E 4 HOH A 174 674 154 HOH HOH . E 4 HOH A 175 675 147 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -28.93 _atom_site.Cartn_y 90.473 _atom_site.Cartn_z 7.226 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 71.32 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #