data_5NS5 # _model_server_result.job_id 5mP6snsDucubFvKBhPhTIQ _model_server_result.datetime_utc '2024-12-01 06:15:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ns5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":404}' # _entry.id 5NS5 # _exptl.entry_id 5NS5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5NS5 _cell.length_a 99 _cell.length_b 99 _cell.length_c 106.49 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NS5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_675 x-y+1,-y+2,-z+1/3 1 0 0 0 -1 0 0 0 -1 0 171.47303 35.496667 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 87 A CYS 74 1_555 A SG CYS 176 A CYS 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc1 A NE2 HIS 36 A HIS 23 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc2 A NE2 HIS 36 A HIS 23 1_555 D CU CU . A CU 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc3 A OD1 ASP 38 A ASP 25 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc4 A OD1 ASP 38 A ASP 25 1_555 D CU CU . A CU 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc5 A OE2 GLU 147 A GLU 134 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc6 A OE1 GLU 147 A GLU 134 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? metalc ? metalc7 A OE1 GLU 147 A GLU 134 1_555 D CU CU . A CU 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc8 A OE2 GLU 147 A GLU 134 1_555 E CU CU . A CU 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc9 A NE2 HIS 216 A HIS 203 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? metalc ? metalc10 A NE2 HIS 216 A HIS 203 1_555 E CU CU . A CU 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.958 ? metalc ? metalc11 A NE2 HIS 237 A HIS 224 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc12 A NE2 HIS 237 A HIS 224 1_555 E CU CU . A CU 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc13 B ZN ZN . A ZN 401 1_555 I O HOH . A HOH 586 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc14 E CU CU . A CU 404 1_555 I O HOH . A HOH 586 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? # _chem_comp.formula 'Cu 2' _chem_comp.formula_weight 63.546 _chem_comp.id CU _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5NS5 _atom_sites.fract_transf_matrix[1][1] 0.010101 _atom_sites.fract_transf_matrix[1][2] 0.005832 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011664 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009391 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 401 1 ZN ZN . C 2 ZN A 1 402 2 ZN ZN . D 3 CU A 1 403 1 CU CU . E 3 CU A 1 404 2 CU CU . F 4 CL A 1 405 1 CL CL . G 4 CL A 1 406 2 CL CL . H 4 CL A 1 407 3 CL CL . I 5 HOH A 1 501 13 HOH HOH . I 5 HOH A 2 502 71 HOH HOH . I 5 HOH A 3 503 10 HOH HOH . I 5 HOH A 4 504 23 HOH HOH . I 5 HOH A 5 505 67 HOH HOH . I 5 HOH A 6 506 9 HOH HOH . I 5 HOH A 7 507 81 HOH HOH . I 5 HOH A 8 508 84 HOH HOH . I 5 HOH A 9 509 109 HOH HOH . I 5 HOH A 10 510 204 HOH HOH . I 5 HOH A 11 511 119 HOH HOH . I 5 HOH A 12 512 5 HOH HOH . I 5 HOH A 13 513 1 HOH HOH . I 5 HOH A 14 514 4 HOH HOH . I 5 HOH A 15 515 149 HOH HOH . I 5 HOH A 16 516 51 HOH HOH . I 5 HOH A 17 517 17 HOH HOH . I 5 HOH A 18 518 110 HOH HOH . I 5 HOH A 19 519 79 HOH HOH . I 5 HOH A 20 520 32 HOH HOH . I 5 HOH A 21 521 128 HOH HOH . I 5 HOH A 22 522 36 HOH HOH . I 5 HOH A 23 523 126 HOH HOH . I 5 HOH A 24 524 60 HOH HOH . I 5 HOH A 25 525 80 HOH HOH . I 5 HOH A 26 526 235 HOH HOH . I 5 HOH A 27 527 160 HOH HOH . I 5 HOH A 28 528 7 HOH HOH . I 5 HOH A 29 529 11 HOH HOH . I 5 HOH A 30 530 8 HOH HOH . I 5 HOH A 31 531 18 HOH HOH . I 5 HOH A 32 532 72 HOH HOH . I 5 HOH A 33 533 101 HOH HOH . I 5 HOH A 34 534 102 HOH HOH . I 5 HOH A 35 535 220 HOH HOH . I 5 HOH A 36 536 138 HOH HOH . I 5 HOH A 37 537 87 HOH HOH . I 5 HOH A 38 538 12 HOH HOH . I 5 HOH A 39 539 49 HOH HOH . I 5 HOH A 40 540 28 HOH HOH . I 5 HOH A 41 541 257 HOH HOH . I 5 HOH A 42 542 158 HOH HOH . I 5 HOH A 43 543 103 HOH HOH . I 5 HOH A 44 544 125 HOH HOH . I 5 HOH A 45 545 44 HOH HOH . I 5 HOH A 46 546 65 HOH HOH . I 5 HOH A 47 547 41 HOH HOH . I 5 HOH A 48 548 104 HOH HOH . I 5 HOH A 49 549 247 HOH HOH . I 5 HOH A 50 550 15 HOH HOH . I 5 HOH A 51 551 58 HOH HOH . I 5 HOH A 52 552 69 HOH HOH . I 5 HOH A 53 553 145 HOH HOH . I 5 HOH A 54 554 26 HOH HOH . I 5 HOH A 55 555 143 HOH HOH . I 5 HOH A 56 556 99 HOH HOH . I 5 HOH A 57 557 131 HOH HOH . I 5 HOH A 58 558 252 HOH HOH . I 5 HOH A 59 559 181 HOH HOH . I 5 HOH A 60 560 50 HOH HOH . I 5 HOH A 61 561 57 HOH HOH . I 5 HOH A 62 562 100 HOH HOH . I 5 HOH A 63 563 56 HOH HOH . I 5 HOH A 64 564 82 HOH HOH . I 5 HOH A 65 565 63 HOH HOH . I 5 HOH A 66 566 29 HOH HOH . I 5 HOH A 67 567 189 HOH HOH . I 5 HOH A 68 568 136 HOH HOH . I 5 HOH A 69 569 43 HOH HOH . I 5 HOH A 70 570 20 HOH HOH . I 5 HOH A 71 571 152 HOH HOH . I 5 HOH A 72 572 66 HOH HOH . I 5 HOH A 73 573 22 HOH HOH . I 5 HOH A 74 574 55 HOH HOH . I 5 HOH A 75 575 46 HOH HOH . I 5 HOH A 76 576 127 HOH HOH . I 5 HOH A 77 577 52 HOH HOH . I 5 HOH A 78 578 113 HOH HOH . I 5 HOH A 79 579 2 HOH HOH . I 5 HOH A 80 580 21 HOH HOH . I 5 HOH A 81 581 157 HOH HOH . I 5 HOH A 82 582 30 HOH HOH . I 5 HOH A 83 583 75 HOH HOH . I 5 HOH A 84 584 3 HOH HOH . I 5 HOH A 85 585 151 HOH HOH . I 5 HOH A 86 586 253 HOH HOH . I 5 HOH A 87 587 190 HOH HOH . I 5 HOH A 88 588 61 HOH HOH . I 5 HOH A 89 589 59 HOH HOH . I 5 HOH A 90 590 225 HOH HOH . I 5 HOH A 91 591 205 HOH HOH . I 5 HOH A 92 592 179 HOH HOH . I 5 HOH A 93 593 42 HOH HOH . I 5 HOH A 94 594 62 HOH HOH . I 5 HOH A 95 595 35 HOH HOH . I 5 HOH A 96 596 78 HOH HOH . I 5 HOH A 97 597 64 HOH HOH . I 5 HOH A 98 598 77 HOH HOH . I 5 HOH A 99 599 228 HOH HOH . I 5 HOH A 100 600 48 HOH HOH . I 5 HOH A 101 601 121 HOH HOH . I 5 HOH A 102 602 166 HOH HOH . I 5 HOH A 103 603 240 HOH HOH . I 5 HOH A 104 604 97 HOH HOH . I 5 HOH A 105 605 40 HOH HOH . I 5 HOH A 106 606 172 HOH HOH . I 5 HOH A 107 607 85 HOH HOH . I 5 HOH A 108 608 92 HOH HOH . I 5 HOH A 109 609 70 HOH HOH . I 5 HOH A 110 610 45 HOH HOH . I 5 HOH A 111 611 112 HOH HOH . I 5 HOH A 112 612 137 HOH HOH . I 5 HOH A 113 613 106 HOH HOH . I 5 HOH A 114 614 147 HOH HOH . I 5 HOH A 115 615 89 HOH HOH . I 5 HOH A 116 616 47 HOH HOH . I 5 HOH A 117 617 122 HOH HOH . I 5 HOH A 118 618 226 HOH HOH . I 5 HOH A 119 619 140 HOH HOH . I 5 HOH A 120 620 184 HOH HOH . I 5 HOH A 121 621 24 HOH HOH . I 5 HOH A 122 622 39 HOH HOH . I 5 HOH A 123 623 76 HOH HOH . I 5 HOH A 124 624 34 HOH HOH . I 5 HOH A 125 625 168 HOH HOH . I 5 HOH A 126 626 83 HOH HOH . I 5 HOH A 127 627 6 HOH HOH . I 5 HOH A 128 628 25 HOH HOH . I 5 HOH A 129 629 259 HOH HOH . I 5 HOH A 130 630 19 HOH HOH . I 5 HOH A 131 631 182 HOH HOH . I 5 HOH A 132 632 187 HOH HOH . I 5 HOH A 133 633 249 HOH HOH . I 5 HOH A 134 634 224 HOH HOH . I 5 HOH A 135 635 38 HOH HOH . I 5 HOH A 136 636 195 HOH HOH . I 5 HOH A 137 637 215 HOH HOH . I 5 HOH A 138 638 33 HOH HOH . I 5 HOH A 139 639 236 HOH HOH . I 5 HOH A 140 640 108 HOH HOH . I 5 HOH A 141 641 107 HOH HOH . I 5 HOH A 142 642 31 HOH HOH . I 5 HOH A 143 643 37 HOH HOH . I 5 HOH A 144 644 124 HOH HOH . I 5 HOH A 145 645 258 HOH HOH . I 5 HOH A 146 646 256 HOH HOH . I 5 HOH A 147 647 132 HOH HOH . I 5 HOH A 148 648 216 HOH HOH . I 5 HOH A 149 649 229 HOH HOH . I 5 HOH A 150 650 86 HOH HOH . I 5 HOH A 151 651 169 HOH HOH . I 5 HOH A 152 652 206 HOH HOH . I 5 HOH A 153 653 255 HOH HOH . I 5 HOH A 154 654 163 HOH HOH . I 5 HOH A 155 655 243 HOH HOH . I 5 HOH A 156 656 164 HOH HOH . I 5 HOH A 157 657 192 HOH HOH . I 5 HOH A 158 658 201 HOH HOH . I 5 HOH A 159 659 230 HOH HOH . I 5 HOH A 160 660 94 HOH HOH . I 5 HOH A 161 661 74 HOH HOH . I 5 HOH A 162 662 144 HOH HOH . I 5 HOH A 163 663 95 HOH HOH . I 5 HOH A 164 664 153 HOH HOH . I 5 HOH A 165 665 237 HOH HOH . I 5 HOH A 166 666 194 HOH HOH . I 5 HOH A 167 667 73 HOH HOH . I 5 HOH A 168 668 219 HOH HOH . I 5 HOH A 169 669 105 HOH HOH . I 5 HOH A 170 670 213 HOH HOH . I 5 HOH A 171 671 170 HOH HOH . I 5 HOH A 172 672 223 HOH HOH . I 5 HOH A 173 673 91 HOH HOH . I 5 HOH A 174 674 148 HOH HOH . I 5 HOH A 175 675 209 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x -21.515 _atom_site.Cartn_y 63.639 _atom_site.Cartn_z 19.997 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 52.39 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU _atom_site.auth_seq_id 404 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #