data_5NSA # _model_server_result.job_id MyJ2lNADSx-XLpQzpfF3TA _model_server_result.datetime_utc '2024-11-14 06:02:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5nsa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 5NSA # _exptl.entry_id 5NSA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 138.114 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-ethynyl-2,4-difluorobenzene _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5NSA _cell.length_a 61.721 _cell.length_b 62.298 _cell.length_c 33.762 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NSA _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B CO B12 . A B12 501 1_555 C CAI 8FS . A 8FS 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc2 D CA CA . A CA 503 1_555 E O HOH . A HOH 620 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc3 D CA CA . A CA 503 1_555 E O HOH . A HOH 735 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? # _chem_comp.formula 'C8 H4 F2' _chem_comp.formula_weight 138.114 _chem_comp.id 8FS _chem_comp.mon_nstd_flag . _chem_comp.name 1-ethynyl-2,4-difluorobenzene _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAI CAJ 8FS trip 1 n n CAH CAD 8FS doub 2 n y CAH CAG 8FS sing 3 n y CAJ CAG 8FS sing 4 n n CAD CAC 8FS sing 5 n y CAG CAF 8FS doub 6 n y CAC FAA 8FS sing 7 n n CAC CAB 8FS doub 8 n y CAF CAB 8FS sing 9 n y CAF FAE 8FS sing 10 n n CAB H1 8FS sing 11 n n CAD H2 8FS sing 12 n n CAH H3 8FS sing 13 n n CAI H4 8FS sing 14 n n # _atom_sites.entry_id 5NSA _atom_sites.fract_transf_matrix[1][1] 0.016202 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016052 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029619 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 B12 A 1 501 301 B12 B12 . C 3 8FS A 1 502 302 8FS 8FS . D 4 CA A 1 503 1 CA CA . E 5 HOH A 1 601 138 HOH HOH . E 5 HOH A 2 602 177 HOH HOH . E 5 HOH A 3 603 105 HOH HOH . E 5 HOH A 4 604 117 HOH HOH . E 5 HOH A 5 605 79 HOH HOH . E 5 HOH A 6 606 218 HOH HOH . E 5 HOH A 7 607 82 HOH HOH . E 5 HOH A 8 608 104 HOH HOH . E 5 HOH A 9 609 181 HOH HOH . E 5 HOH A 10 610 93 HOH HOH . E 5 HOH A 11 611 63 HOH HOH . E 5 HOH A 12 612 176 HOH HOH . E 5 HOH A 13 613 170 HOH HOH . E 5 HOH A 14 614 151 HOH HOH . E 5 HOH A 15 615 39 HOH HOH . E 5 HOH A 16 616 97 HOH HOH . E 5 HOH A 17 617 84 HOH HOH . E 5 HOH A 18 618 204 HOH HOH . E 5 HOH A 19 619 118 HOH HOH . E 5 HOH A 20 620 234 HOH HOH . E 5 HOH A 21 621 159 HOH HOH . E 5 HOH A 22 622 73 HOH HOH . E 5 HOH A 23 623 115 HOH HOH . E 5 HOH A 24 624 65 HOH HOH . E 5 HOH A 25 625 51 HOH HOH . E 5 HOH A 26 626 119 HOH HOH . E 5 HOH A 27 627 143 HOH HOH . E 5 HOH A 28 628 83 HOH HOH . E 5 HOH A 29 629 57 HOH HOH . E 5 HOH A 30 630 27 HOH HOH . E 5 HOH A 31 631 87 HOH HOH . E 5 HOH A 32 632 76 HOH HOH . E 5 HOH A 33 633 167 HOH HOH . E 5 HOH A 34 634 195 HOH HOH . E 5 HOH A 35 635 184 HOH HOH . E 5 HOH A 36 636 26 HOH HOH . E 5 HOH A 37 637 43 HOH HOH . E 5 HOH A 38 638 40 HOH HOH . E 5 HOH A 39 639 33 HOH HOH . E 5 HOH A 40 640 213 HOH HOH . E 5 HOH A 41 641 145 HOH HOH . E 5 HOH A 42 642 106 HOH HOH . E 5 HOH A 43 643 21 HOH HOH . E 5 HOH A 44 644 193 HOH HOH . E 5 HOH A 45 645 227 HOH HOH . E 5 HOH A 46 646 6 HOH HOH . E 5 HOH A 47 647 99 HOH HOH . E 5 HOH A 48 648 4 HOH HOH . E 5 HOH A 49 649 56 HOH HOH . E 5 HOH A 50 650 50 HOH HOH . E 5 HOH A 51 651 12 HOH HOH . E 5 HOH A 52 652 49 HOH HOH . E 5 HOH A 53 653 7 HOH HOH . E 5 HOH A 54 654 13 HOH HOH . E 5 HOH A 55 655 86 HOH HOH . E 5 HOH A 56 656 25 HOH HOH . E 5 HOH A 57 657 102 HOH HOH . E 5 HOH A 58 658 154 HOH HOH . E 5 HOH A 59 659 68 HOH HOH . E 5 HOH A 60 660 142 HOH HOH . E 5 HOH A 61 661 55 HOH HOH . E 5 HOH A 62 662 155 HOH HOH . E 5 HOH A 63 663 48 HOH HOH . E 5 HOH A 64 664 100 HOH HOH . E 5 HOH A 65 665 180 HOH HOH . E 5 HOH A 66 666 10 HOH HOH . E 5 HOH A 67 667 31 HOH HOH . E 5 HOH A 68 668 38 HOH HOH . E 5 HOH A 69 669 3 HOH HOH . E 5 HOH A 70 670 67 HOH HOH . E 5 HOH A 71 671 44 HOH HOH . E 5 HOH A 72 672 64 HOH HOH . E 5 HOH A 73 673 169 HOH HOH . E 5 HOH A 74 674 212 HOH HOH . E 5 HOH A 75 675 9 HOH HOH . E 5 HOH A 76 676 58 HOH HOH . E 5 HOH A 77 677 62 HOH HOH . E 5 HOH A 78 678 17 HOH HOH . E 5 HOH A 79 679 20 HOH HOH . E 5 HOH A 80 680 233 HOH HOH . E 5 HOH A 81 681 32 HOH HOH . E 5 HOH A 82 682 150 HOH HOH . E 5 HOH A 83 683 94 HOH HOH . E 5 HOH A 84 684 85 HOH HOH . E 5 HOH A 85 685 8 HOH HOH . E 5 HOH A 86 686 209 HOH HOH . E 5 HOH A 87 687 30 HOH HOH . E 5 HOH A 88 688 214 HOH HOH . E 5 HOH A 89 689 75 HOH HOH . E 5 HOH A 90 690 42 HOH HOH . E 5 HOH A 91 691 19 HOH HOH . E 5 HOH A 92 692 54 HOH HOH . E 5 HOH A 93 693 110 HOH HOH . E 5 HOH A 94 694 22 HOH HOH . E 5 HOH A 95 695 16 HOH HOH . E 5 HOH A 96 696 160 HOH HOH . E 5 HOH A 97 697 71 HOH HOH . E 5 HOH A 98 698 122 HOH HOH . E 5 HOH A 99 699 1 HOH HOH . E 5 HOH A 100 700 148 HOH HOH . E 5 HOH A 101 701 2 HOH HOH . E 5 HOH A 102 702 222 HOH HOH . E 5 HOH A 103 703 210 HOH HOH . E 5 HOH A 104 704 81 HOH HOH . E 5 HOH A 105 705 45 HOH HOH . E 5 HOH A 106 706 80 HOH HOH . E 5 HOH A 107 707 74 HOH HOH . E 5 HOH A 108 708 108 HOH HOH . E 5 HOH A 109 709 175 HOH HOH . E 5 HOH A 110 710 224 HOH HOH . E 5 HOH A 111 711 131 HOH HOH . E 5 HOH A 112 712 46 HOH HOH . E 5 HOH A 113 713 15 HOH HOH . E 5 HOH A 114 714 111 HOH HOH . E 5 HOH A 115 715 221 HOH HOH . E 5 HOH A 116 716 103 HOH HOH . E 5 HOH A 117 717 219 HOH HOH . E 5 HOH A 118 718 24 HOH HOH . E 5 HOH A 119 719 129 HOH HOH . E 5 HOH A 120 720 59 HOH HOH . E 5 HOH A 121 721 37 HOH HOH . E 5 HOH A 122 722 53 HOH HOH . E 5 HOH A 123 723 189 HOH HOH . E 5 HOH A 124 724 11 HOH HOH . E 5 HOH A 125 725 29 HOH HOH . E 5 HOH A 126 726 116 HOH HOH . E 5 HOH A 127 727 179 HOH HOH . E 5 HOH A 128 728 36 HOH HOH . E 5 HOH A 129 729 202 HOH HOH . E 5 HOH A 130 730 191 HOH HOH . E 5 HOH A 131 731 14 HOH HOH . E 5 HOH A 132 732 173 HOH HOH . E 5 HOH A 133 733 174 HOH HOH . E 5 HOH A 134 734 78 HOH HOH . E 5 HOH A 135 735 217 HOH HOH . E 5 HOH A 136 736 23 HOH HOH . E 5 HOH A 137 737 91 HOH HOH . E 5 HOH A 138 738 18 HOH HOH . E 5 HOH A 139 739 5 HOH HOH . E 5 HOH A 140 740 144 HOH HOH . E 5 HOH A 141 741 124 HOH HOH . E 5 HOH A 142 742 107 HOH HOH . E 5 HOH A 143 743 182 HOH HOH . E 5 HOH A 144 744 152 HOH HOH . E 5 HOH A 145 745 163 HOH HOH . E 5 HOH A 146 746 135 HOH HOH . E 5 HOH A 147 747 223 HOH HOH . E 5 HOH A 148 748 178 HOH HOH . E 5 HOH A 149 749 235 HOH HOH . E 5 HOH A 150 750 130 HOH HOH . E 5 HOH A 151 751 164 HOH HOH . E 5 HOH A 152 752 215 HOH HOH . E 5 HOH A 153 753 172 HOH HOH . E 5 HOH A 154 754 207 HOH HOH . E 5 HOH A 155 755 161 HOH HOH . E 5 HOH A 156 756 147 HOH HOH . E 5 HOH A 157 757 194 HOH HOH . E 5 HOH A 158 758 92 HOH HOH . E 5 HOH A 159 759 114 HOH HOH . E 5 HOH A 160 760 136 HOH HOH . E 5 HOH A 161 761 139 HOH HOH . E 5 HOH A 162 762 171 HOH HOH . E 5 HOH A 163 763 208 HOH HOH . E 5 HOH A 164 764 141 HOH HOH . E 5 HOH A 165 765 220 HOH HOH . E 5 HOH A 166 766 137 HOH HOH . E 5 HOH A 167 767 168 HOH HOH . E 5 HOH A 168 768 156 HOH HOH . E 5 HOH A 169 769 186 HOH HOH . E 5 HOH A 170 770 69 HOH HOH . E 5 HOH A 171 771 112 HOH HOH . E 5 HOH A 172 772 89 HOH HOH . E 5 HOH A 173 773 88 HOH HOH . E 5 HOH A 174 774 198 HOH HOH . E 5 HOH A 175 775 201 HOH HOH . E 5 HOH A 176 776 90 HOH HOH . E 5 HOH A 177 777 134 HOH HOH . E 5 HOH A 178 778 185 HOH HOH . E 5 HOH A 179 779 41 HOH HOH . E 5 HOH A 180 780 197 HOH HOH . E 5 HOH A 181 781 206 HOH HOH . E 5 HOH A 182 782 228 HOH HOH . E 5 HOH A 183 783 34 HOH HOH . E 5 HOH A 184 784 47 HOH HOH . E 5 HOH A 185 785 149 HOH HOH . E 5 HOH A 186 786 225 HOH HOH . E 5 HOH A 187 787 96 HOH HOH . E 5 HOH A 188 788 52 HOH HOH . E 5 HOH A 189 789 166 HOH HOH . E 5 HOH A 190 790 109 HOH HOH . E 5 HOH A 191 791 140 HOH HOH . E 5 HOH A 192 792 61 HOH HOH . E 5 HOH A 193 793 127 HOH HOH . E 5 HOH A 194 794 158 HOH HOH . E 5 HOH A 195 795 211 HOH HOH . E 5 HOH A 196 796 66 HOH HOH . E 5 HOH A 197 797 199 HOH HOH . E 5 HOH A 198 798 126 HOH HOH . E 5 HOH A 199 799 128 HOH HOH . E 5 HOH A 200 800 113 HOH HOH . E 5 HOH A 201 801 28 HOH HOH . E 5 HOH A 202 802 133 HOH HOH . E 5 HOH A 203 803 70 HOH HOH . E 5 HOH A 204 804 95 HOH HOH . E 5 HOH A 205 805 187 HOH HOH . E 5 HOH A 206 806 188 HOH HOH . E 5 HOH A 207 807 203 HOH HOH . E 5 HOH A 208 808 153 HOH HOH . E 5 HOH A 209 809 216 HOH HOH . E 5 HOH A 210 810 196 HOH HOH . E 5 HOH A 211 811 101 HOH HOH . E 5 HOH A 212 812 200 HOH HOH . E 5 HOH A 213 813 162 HOH HOH . E 5 HOH A 214 814 77 HOH HOH . E 5 HOH A 215 815 232 HOH HOH . E 5 HOH A 216 816 183 HOH HOH . E 5 HOH A 217 817 230 HOH HOH . E 5 HOH A 218 818 146 HOH HOH . E 5 HOH A 219 819 72 HOH HOH . E 5 HOH A 220 820 98 HOH HOH . E 5 HOH A 221 821 60 HOH HOH . E 5 HOH A 222 822 132 HOH HOH . E 5 HOH A 223 823 125 HOH HOH . E 5 HOH A 224 824 165 HOH HOH . E 5 HOH A 225 825 120 HOH HOH . E 5 HOH A 226 826 226 HOH HOH . E 5 HOH A 227 827 35 HOH HOH . E 5 HOH A 228 828 205 HOH HOH . E 5 HOH A 229 829 231 HOH HOH . E 5 HOH A 230 830 236 HOH HOH . E 5 HOH A 231 831 157 HOH HOH . E 5 HOH A 232 832 229 HOH HOH . E 5 HOH A 233 833 123 HOH HOH . E 5 HOH A 234 834 121 HOH HOH . E 5 HOH A 235 835 192 HOH HOH . E 5 HOH A 236 836 190 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F FAE 8FS . . . C 3 14.703 -10.076 -22.884 1 22.15 ? FAE 8FS 502 A 1 HETATM 2 C CAF 8FS . . . C 3 16.062 -10.091 -22.69 1 20.88 ? CAF 8FS 502 A 1 HETATM 3 C CAB 8FS . . . C 3 16.629 -11.079 -21.889 1 21.04 ? CAB 8FS 502 A 1 HETATM 4 C CAC 8FS . . . C 3 18.008 -11.096 -21.689 1 22.42 ? CAC 8FS 502 A 1 HETATM 5 F FAA 8FS . . . C 3 18.576 -12.08 -20.88 1 25.41 ? FAA 8FS 502 A 1 HETATM 6 C CAD 8FS . . . C 3 18.824 -10.124 -22.297 1 22.68 ? CAD 8FS 502 A 1 HETATM 7 C CAH 8FS . . . C 3 18.262 -9.135 -23.104 1 20.3 ? CAH 8FS 502 A 1 HETATM 8 C CAG 8FS . . . C 3 16.882 -9.119 -23.302 1 19.63 ? CAG 8FS 502 A 1 HETATM 9 C CAJ 8FS . . . C 3 16.316 -8.129 -24.112 1 20.79 ? CAJ 8FS 502 A 1 HETATM 10 C CAI 8FS . . . C 3 15.899 -7.4 -24.707 1 21.95 ? CAI 8FS 502 A 1 HETATM 11 H H1 8FS . . . C 3 16.09 -11.718 -21.484 1 25.26 ? H1 8FS 502 A 1 HETATM 12 H H2 8FS . . . C 3 19.743 -10.142 -22.161 1 27.23 ? H2 8FS 502 A 1 HETATM 13 H H3 8FS . . . C 3 18.802 -8.495 -23.507 1 24.37 ? H3 8FS 502 A 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #