data_5NT4 # _model_server_result.job_id PrjZTzKkpl1PGhDUjEeodg _model_server_result.datetime_utc '2024-11-13 19:36:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5nt4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":1203}' # _entry.id 5NT4 # _exptl.entry_id 5NT4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5NT4 _cell.length_a 90.06 _cell.length_b 98.15 _cell.length_c 118.38 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NT4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,N,O 1 1 C,D,J,K,L,M,P,Q 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 K N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 159 A CYS 1081 1_555 E ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc2 A ND1 HIS 162 A HIS 1084 1_555 E ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc3 A SG CYS 167 A CYS 1089 1_555 E ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc4 A SG CYS 170 A CYS 1092 1_555 E ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc5 C SG CYS 159 B CYS 1081 1_555 J ZN ZN . B ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc6 C ND1 HIS 162 B HIS 1084 1_555 J ZN ZN . B ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc7 C SG CYS 167 B CYS 1089 1_555 J ZN ZN . B ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc8 C SG CYS 170 B CYS 1092 1_555 J ZN ZN . B ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 346 n n S O2 SO4 doub 347 n n S O3 SO4 sing 348 n n S O4 SO4 sing 349 n n # _atom_sites.entry_id 5NT4 _atom_sites.fract_transf_matrix[1][1] 0.011104 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010188 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008447 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN A 1 1201 2 ZN ZN . F 4 SO4 A 1 1202 5 SO4 SO4 . G 4 SO4 A 1 1203 6 SO4 SO4 . H 5 97Z A 1 1204 1 97Z DRG . I 6 GOL H 1 1201 1 GOL GOL . J 3 ZN B 1 1201 1 ZN ZN . K 4 SO4 B 1 1202 2 SO4 SO4 . L 4 SO4 B 1 1203 7 SO4 SO4 . M 5 97Z B 1 1204 2 97Z DRG . N 7 HOH A 1 1301 324 HOH HOH . N 7 HOH A 2 1302 253 HOH HOH . N 7 HOH A 3 1303 282 HOH HOH . N 7 HOH A 4 1304 439 HOH HOH . N 7 HOH A 5 1305 215 HOH HOH . N 7 HOH A 6 1306 214 HOH HOH . N 7 HOH A 7 1307 235 HOH HOH . N 7 HOH A 8 1308 237 HOH HOH . N 7 HOH A 9 1309 61 HOH HOH . N 7 HOH A 10 1310 306 HOH HOH . N 7 HOH A 11 1311 63 HOH HOH . N 7 HOH A 12 1312 308 HOH HOH . N 7 HOH A 13 1313 417 HOH HOH . N 7 HOH A 14 1314 209 HOH HOH . N 7 HOH A 15 1315 302 HOH HOH . N 7 HOH A 16 1316 142 HOH HOH . N 7 HOH A 17 1317 129 HOH HOH . N 7 HOH A 18 1318 447 HOH HOH . N 7 HOH A 19 1319 431 HOH HOH . N 7 HOH A 20 1320 117 HOH HOH . N 7 HOH A 21 1321 329 HOH HOH . N 7 HOH A 22 1322 311 HOH HOH . N 7 HOH A 23 1323 216 HOH HOH . N 7 HOH A 24 1324 229 HOH HOH . N 7 HOH A 25 1325 65 HOH HOH . N 7 HOH A 26 1326 131 HOH HOH . N 7 HOH A 27 1327 57 HOH HOH . N 7 HOH A 28 1328 331 HOH HOH . N 7 HOH A 29 1329 208 HOH HOH . N 7 HOH A 30 1330 50 HOH HOH . N 7 HOH A 31 1331 122 HOH HOH . N 7 HOH A 32 1332 204 HOH HOH . N 7 HOH A 33 1333 126 HOH HOH . N 7 HOH A 34 1334 93 HOH HOH . N 7 HOH A 35 1335 299 HOH HOH . N 7 HOH A 36 1336 446 HOH HOH . N 7 HOH A 37 1337 284 HOH HOH . N 7 HOH A 38 1338 368 HOH HOH . N 7 HOH A 39 1339 283 HOH HOH . N 7 HOH A 40 1340 371 HOH HOH . N 7 HOH A 41 1341 45 HOH HOH . N 7 HOH A 42 1342 48 HOH HOH . N 7 HOH A 43 1343 262 HOH HOH . N 7 HOH A 44 1344 367 HOH HOH . N 7 HOH A 45 1345 119 HOH HOH . N 7 HOH A 46 1346 270 HOH HOH . N 7 HOH A 47 1347 337 HOH HOH . N 7 HOH A 48 1348 47 HOH HOH . N 7 HOH A 49 1349 295 HOH HOH . N 7 HOH A 50 1350 399 HOH HOH . N 7 HOH A 51 1351 441 HOH HOH . N 7 HOH A 52 1352 207 HOH HOH . N 7 HOH A 53 1353 316 HOH HOH . N 7 HOH A 54 1354 225 HOH HOH . N 7 HOH A 55 1355 336 HOH HOH . N 7 HOH A 56 1356 261 HOH HOH . N 7 HOH A 57 1357 285 HOH HOH . N 7 HOH A 58 1358 139 HOH HOH . N 7 HOH A 59 1359 433 HOH HOH . N 7 HOH A 60 1360 56 HOH HOH . N 7 HOH A 61 1361 326 HOH HOH . N 7 HOH A 62 1362 66 HOH HOH . N 7 HOH A 63 1363 212 HOH HOH . N 7 HOH A 64 1364 232 HOH HOH . N 7 HOH A 65 1365 60 HOH HOH . N 7 HOH A 66 1366 281 HOH HOH . N 7 HOH A 67 1367 297 HOH HOH . N 7 HOH A 68 1368 309 HOH HOH . N 7 HOH A 69 1369 134 HOH HOH . N 7 HOH A 70 1370 372 HOH HOH . N 7 HOH A 71 1371 165 HOH HOH . N 7 HOH A 72 1372 135 HOH HOH . N 7 HOH A 73 1373 53 HOH HOH . N 7 HOH A 74 1374 365 HOH HOH . N 7 HOH A 75 1375 227 HOH HOH . N 7 HOH A 76 1376 127 HOH HOH . N 7 HOH A 77 1377 132 HOH HOH . N 7 HOH A 78 1378 156 HOH HOH . N 7 HOH A 79 1379 68 HOH HOH . N 7 HOH A 80 1380 200 HOH HOH . N 7 HOH A 81 1381 280 HOH HOH . N 7 HOH A 82 1382 70 HOH HOH . N 7 HOH A 83 1383 266 HOH HOH . N 7 HOH A 84 1384 128 HOH HOH . N 7 HOH A 85 1385 385 HOH HOH . N 7 HOH A 86 1386 137 HOH HOH . N 7 HOH A 87 1387 376 HOH HOH . N 7 HOH A 88 1388 138 HOH HOH . N 7 HOH A 89 1389 44 HOH HOH . N 7 HOH A 90 1390 430 HOH HOH . N 7 HOH A 91 1391 286 HOH HOH . N 7 HOH A 92 1392 230 HOH HOH . N 7 HOH A 93 1393 412 HOH HOH . N 7 HOH A 94 1394 64 HOH HOH . N 7 HOH A 95 1395 136 HOH HOH . N 7 HOH A 96 1396 118 HOH HOH . N 7 HOH A 97 1397 52 HOH HOH . N 7 HOH A 98 1398 370 HOH HOH . N 7 HOH A 99 1399 304 HOH HOH . N 7 HOH A 100 1400 121 HOH HOH . N 7 HOH A 101 1401 418 HOH HOH . N 7 HOH A 102 1402 58 HOH HOH . N 7 HOH A 103 1403 321 HOH HOH . N 7 HOH A 104 1404 223 HOH HOH . N 7 HOH A 105 1405 62 HOH HOH . N 7 HOH A 106 1406 369 HOH HOH . N 7 HOH A 107 1407 154 HOH HOH . N 7 HOH A 108 1408 67 HOH HOH . N 7 HOH A 109 1409 49 HOH HOH . N 7 HOH A 110 1410 124 HOH HOH . N 7 HOH A 111 1411 339 HOH HOH . N 7 HOH A 112 1412 440 HOH HOH . N 7 HOH A 113 1413 46 HOH HOH . O 7 HOH H 1 1301 426 HOH HOH . O 7 HOH H 2 1302 427 HOH HOH . O 7 HOH H 3 1303 320 HOH HOH . O 7 HOH H 4 1304 54 HOH HOH . O 7 HOH H 5 1305 317 HOH HOH . O 7 HOH H 6 1306 55 HOH HOH . O 7 HOH H 7 1307 252 HOH HOH . O 7 HOH H 8 1308 435 HOH HOH . O 7 HOH H 9 1309 290 HOH HOH . O 7 HOH H 10 1310 300 HOH HOH . O 7 HOH H 11 1311 133 HOH HOH . O 7 HOH H 12 1312 292 HOH HOH . O 7 HOH H 13 1313 267 HOH HOH . O 7 HOH H 14 1314 120 HOH HOH . O 7 HOH H 15 1315 140 HOH HOH . O 7 HOH H 16 1316 428 HOH HOH . P 7 HOH B 1 1301 377 HOH HOH . P 7 HOH B 2 1302 429 HOH HOH . P 7 HOH B 3 1303 332 HOH HOH . P 7 HOH B 4 1304 352 HOH HOH . P 7 HOH B 5 1305 411 HOH HOH . P 7 HOH B 6 1306 202 HOH HOH . P 7 HOH B 7 1307 378 HOH HOH . P 7 HOH B 8 1308 125 HOH HOH . P 7 HOH B 9 1309 241 HOH HOH . P 7 HOH B 10 1310 438 HOH HOH . P 7 HOH B 11 1311 374 HOH HOH . P 7 HOH B 12 1312 218 HOH HOH . P 7 HOH B 13 1313 323 HOH HOH . P 7 HOH B 14 1314 342 HOH HOH . P 7 HOH B 15 1315 256 HOH HOH . P 7 HOH B 16 1316 152 HOH HOH . P 7 HOH B 17 1317 147 HOH HOH . P 7 HOH B 18 1318 381 HOH HOH . P 7 HOH B 19 1319 157 HOH HOH . P 7 HOH B 20 1320 148 HOH HOH . P 7 HOH B 21 1321 242 HOH HOH . P 7 HOH B 22 1322 274 HOH HOH . P 7 HOH B 23 1323 146 HOH HOH . P 7 HOH B 24 1324 437 HOH HOH . P 7 HOH B 25 1325 143 HOH HOH . P 7 HOH B 26 1326 273 HOH HOH . P 7 HOH B 27 1327 288 HOH HOH . P 7 HOH B 28 1328 384 HOH HOH . P 7 HOH B 29 1329 298 HOH HOH . P 7 HOH B 30 1330 301 HOH HOH . P 7 HOH B 31 1331 294 HOH HOH . P 7 HOH B 32 1332 164 HOH HOH . P 7 HOH B 33 1333 313 HOH HOH . P 7 HOH B 34 1334 268 HOH HOH . P 7 HOH B 35 1335 271 HOH HOH . P 7 HOH B 36 1336 211 HOH HOH . P 7 HOH B 37 1337 264 HOH HOH . P 7 HOH B 38 1338 318 HOH HOH . P 7 HOH B 39 1339 353 HOH HOH . P 7 HOH B 40 1340 219 HOH HOH . P 7 HOH B 41 1341 420 HOH HOH . P 7 HOH B 42 1342 153 HOH HOH . P 7 HOH B 43 1343 269 HOH HOH . P 7 HOH B 44 1344 263 HOH HOH . P 7 HOH B 45 1345 445 HOH HOH . P 7 HOH B 46 1346 312 HOH HOH . P 7 HOH B 47 1347 443 HOH HOH . P 7 HOH B 48 1348 392 HOH HOH . P 7 HOH B 49 1349 338 HOH HOH . P 7 HOH B 50 1350 293 HOH HOH . P 7 HOH B 51 1351 59 HOH HOH . P 7 HOH B 52 1352 201 HOH HOH . P 7 HOH B 53 1353 123 HOH HOH . P 7 HOH B 54 1354 259 HOH HOH . P 7 HOH B 55 1355 278 HOH HOH . P 7 HOH B 56 1356 226 HOH HOH . P 7 HOH B 57 1357 351 HOH HOH . P 7 HOH B 58 1358 444 HOH HOH . P 7 HOH B 59 1359 383 HOH HOH . P 7 HOH B 60 1360 396 HOH HOH . P 7 HOH B 61 1361 265 HOH HOH . P 7 HOH B 62 1362 289 HOH HOH . P 7 HOH B 63 1363 424 HOH HOH . P 7 HOH B 64 1364 391 HOH HOH . P 7 HOH B 65 1365 220 HOH HOH . P 7 HOH B 66 1366 333 HOH HOH . P 7 HOH B 67 1367 51 HOH HOH . P 7 HOH B 68 1368 322 HOH HOH . P 7 HOH B 69 1369 254 HOH HOH . P 7 HOH B 70 1370 217 HOH HOH . P 7 HOH B 71 1371 277 HOH HOH . P 7 HOH B 72 1372 276 HOH HOH . P 7 HOH B 73 1373 327 HOH HOH . P 7 HOH B 74 1374 144 HOH HOH . P 7 HOH B 75 1375 21 HOH HOH . P 7 HOH B 76 1376 33 HOH HOH . P 7 HOH B 77 1377 432 HOH HOH . P 7 HOH B 78 1378 221 HOH HOH . P 7 HOH B 79 1379 325 HOH HOH . P 7 HOH B 80 1380 257 HOH HOH . P 7 HOH B 81 1381 390 HOH HOH . P 7 HOH B 82 1382 343 HOH HOH . P 7 HOH B 83 1383 158 HOH HOH . P 7 HOH B 84 1384 155 HOH HOH . P 7 HOH B 85 1385 442 HOH HOH . P 7 HOH B 86 1386 413 HOH HOH . P 7 HOH B 87 1387 272 HOH HOH . P 7 HOH B 88 1388 149 HOH HOH . P 7 HOH B 89 1389 389 HOH HOH . P 7 HOH B 90 1390 255 HOH HOH . P 7 HOH B 91 1391 375 HOH HOH . P 7 HOH B 92 1392 382 HOH HOH . Q 7 HOH I 1 1201 145 HOH HOH . Q 7 HOH I 2 1202 305 HOH HOH . Q 7 HOH I 3 1203 260 HOH HOH . Q 7 HOH I 4 1204 334 HOH HOH . Q 7 HOH I 5 1205 335 HOH HOH . Q 7 HOH I 6 1206 160 HOH HOH . Q 7 HOH I 7 1207 291 HOH HOH . Q 7 HOH I 8 1208 275 HOH HOH . Q 7 HOH I 9 1209 416 HOH HOH . Q 7 HOH I 10 1210 162 HOH HOH . Q 7 HOH I 11 1211 287 HOH HOH . Q 7 HOH I 12 1212 159 HOH HOH . Q 7 HOH I 13 1213 161 HOH HOH . Q 7 HOH I 14 1214 398 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . L 4 18.611 -24.699 2.855 1 63.42 ? S SO4 1203 B 1 HETATM 2 O O1 SO4 . . . L 4 19.31 -26.006 2.774 1 61.1 ? O1 SO4 1203 B 1 HETATM 3 O O2 SO4 . . . L 4 17.995 -24.321 1.574 1 58.59 ? O2 SO4 1203 B 1 HETATM 4 O O3 SO4 . . . L 4 19.644 -23.698 3.179 1 72.34 ? O3 SO4 1203 B 1 HETATM 5 O O4 SO4 . . . L 4 17.561 -24.719 3.921 1 59.11 ? O4 SO4 1203 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 5 #