data_5NU3 # _model_server_result.job_id PgzC7ugDw-9xc5hs31cWdQ _model_server_result.datetime_utc '2024-11-24 11:41:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5nu3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1201}' # _entry.id 5NU3 # _exptl.entry_id 5NU3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 366.41 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[[2,8-bis(oxidanyl)naphthalen-1-yl]methyl]-4-ethanoyl-3-ethyl-5-methyl-1~{H}-pyrrole-2-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5NU3 _cell.length_a 35.86 _cell.length_b 49.24 _cell.length_c 80.51 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NU3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H22 N2 O4' _chem_comp.formula_weight 366.41 _chem_comp.id 99E _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[[2,8-bis(oxidanyl)naphthalen-1-yl]methyl]-4-ethanoyl-3-ethyl-5-methyl-1~{H}-pyrrole-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O22 C13 99E sing 1 n n C14 C13 99E doub 2 n y C14 C15 99E sing 3 n y C13 C11 99E sing 4 n y C15 C16 99E doub 5 n y C11 C3 99E sing 6 n n C11 C17 99E doub 7 n y C16 C17 99E sing 8 n y C16 C21 99E sing 9 n y C3 N13 99E sing 10 n n C17 C18 99E sing 11 n y C21 C20 99E doub 12 n y O15 C1 99E doub 13 n n C18 C19 99E doub 14 n y C18 O1 99E sing 15 n n C20 C19 99E sing 16 n y N13 C1 99E sing 17 n n C1 C2 99E sing 18 n n C2 N3 99E sing 19 n y C2 C6 99E doub 20 n y N3 C4 99E sing 21 n y C7 C6 99E sing 22 n n C7 C8 99E sing 23 n n C6 C5 99E sing 24 n y C4 C5 99E doub 25 n y C4 C12 99E sing 26 n n C5 C9 99E sing 27 n n C10 C9 99E sing 28 n n C9 O16 99E doub 29 n n O1 H1 99E sing 30 n n C21 H2 99E sing 31 n n C7 H3 99E sing 32 n n C7 H4 99E sing 33 n n C8 H5 99E sing 34 n n C8 H6 99E sing 35 n n C8 H7 99E sing 36 n n C10 H8 99E sing 37 n n C10 H9 99E sing 38 n n C10 H10 99E sing 39 n n N3 H11 99E sing 40 n n C12 H12 99E sing 41 n n C12 H13 99E sing 42 n n C12 H14 99E sing 43 n n N13 H15 99E sing 44 n n C3 H16 99E sing 45 n n C3 H17 99E sing 46 n n C14 H18 99E sing 47 n n C15 H19 99E sing 48 n n C19 H20 99E sing 49 n n C20 H21 99E sing 50 n n O22 H22 99E sing 51 n n # _atom_sites.entry_id 5NU3 _atom_sites.fract_transf_matrix[1][1] 0.027886 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020309 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012421 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 99E A 1 1201 1 99E 6S2 . C 3 BU3 A 1 1202 1 BU3 BU3 . D 3 BU3 A 1 1203 2 BU3 BU3 . E 3 BU3 A 1 1204 3 BU3 BU3 . F 3 BU3 A 1 1205 4 BU3 BU3 . G 4 SO4 A 1 1206 1 SO4 SO4 . H 5 HOH A 1 1301 151 HOH HOH . H 5 HOH A 2 1302 119 HOH HOH . H 5 HOH A 3 1303 175 HOH HOH . H 5 HOH A 4 1304 92 HOH HOH . H 5 HOH A 5 1305 162 HOH HOH . H 5 HOH A 6 1306 129 HOH HOH . H 5 HOH A 7 1307 167 HOH HOH . H 5 HOH A 8 1308 116 HOH HOH . H 5 HOH A 9 1309 140 HOH HOH . H 5 HOH A 10 1310 25 HOH HOH . H 5 HOH A 11 1311 29 HOH HOH . H 5 HOH A 12 1312 20 HOH HOH . H 5 HOH A 13 1313 48 HOH HOH . H 5 HOH A 14 1314 31 HOH HOH . H 5 HOH A 15 1315 28 HOH HOH . H 5 HOH A 16 1316 87 HOH HOH . H 5 HOH A 17 1317 2 HOH HOH . H 5 HOH A 18 1318 160 HOH HOH . H 5 HOH A 19 1319 88 HOH HOH . H 5 HOH A 20 1320 96 HOH HOH . H 5 HOH A 21 1321 58 HOH HOH . H 5 HOH A 22 1322 105 HOH HOH . H 5 HOH A 23 1323 86 HOH HOH . H 5 HOH A 24 1324 56 HOH HOH . H 5 HOH A 25 1325 83 HOH HOH . H 5 HOH A 26 1326 62 HOH HOH . H 5 HOH A 27 1327 12 HOH HOH . H 5 HOH A 28 1328 35 HOH HOH . H 5 HOH A 29 1329 39 HOH HOH . H 5 HOH A 30 1330 16 HOH HOH . H 5 HOH A 31 1331 33 HOH HOH . H 5 HOH A 32 1332 134 HOH HOH . H 5 HOH A 33 1333 46 HOH HOH . H 5 HOH A 34 1334 18 HOH HOH . H 5 HOH A 35 1335 47 HOH HOH . H 5 HOH A 36 1336 19 HOH HOH . H 5 HOH A 37 1337 61 HOH HOH . H 5 HOH A 38 1338 8 HOH HOH . H 5 HOH A 39 1339 74 HOH HOH . H 5 HOH A 40 1340 171 HOH HOH . H 5 HOH A 41 1341 127 HOH HOH . H 5 HOH A 42 1342 4 HOH HOH . H 5 HOH A 43 1343 79 HOH HOH . H 5 HOH A 44 1344 50 HOH HOH . H 5 HOH A 45 1345 53 HOH HOH . H 5 HOH A 46 1346 7 HOH HOH . H 5 HOH A 47 1347 170 HOH HOH . H 5 HOH A 48 1348 21 HOH HOH . H 5 HOH A 49 1349 69 HOH HOH . H 5 HOH A 50 1350 71 HOH HOH . H 5 HOH A 51 1351 59 HOH HOH . H 5 HOH A 52 1352 73 HOH HOH . H 5 HOH A 53 1353 22 HOH HOH . H 5 HOH A 54 1354 30 HOH HOH . H 5 HOH A 55 1355 126 HOH HOH . H 5 HOH A 56 1356 17 HOH HOH . H 5 HOH A 57 1357 54 HOH HOH . H 5 HOH A 58 1358 109 HOH HOH . H 5 HOH A 59 1359 51 HOH HOH . H 5 HOH A 60 1360 15 HOH HOH . H 5 HOH A 61 1361 75 HOH HOH . H 5 HOH A 62 1362 27 HOH HOH . H 5 HOH A 63 1363 52 HOH HOH . H 5 HOH A 64 1364 42 HOH HOH . H 5 HOH A 65 1365 3 HOH HOH . H 5 HOH A 66 1366 24 HOH HOH . H 5 HOH A 67 1367 76 HOH HOH . H 5 HOH A 68 1368 9 HOH HOH . H 5 HOH A 69 1369 32 HOH HOH . H 5 HOH A 70 1370 34 HOH HOH . H 5 HOH A 71 1371 40 HOH HOH . H 5 HOH A 72 1372 137 HOH HOH . H 5 HOH A 73 1373 13 HOH HOH . H 5 HOH A 74 1374 103 HOH HOH . H 5 HOH A 75 1375 60 HOH HOH . H 5 HOH A 76 1376 36 HOH HOH . H 5 HOH A 77 1377 106 HOH HOH . H 5 HOH A 78 1378 23 HOH HOH . H 5 HOH A 79 1379 44 HOH HOH . H 5 HOH A 80 1380 63 HOH HOH . H 5 HOH A 81 1381 11 HOH HOH . H 5 HOH A 82 1382 41 HOH HOH . H 5 HOH A 83 1383 93 HOH HOH . H 5 HOH A 84 1384 26 HOH HOH . H 5 HOH A 85 1385 5 HOH HOH . H 5 HOH A 86 1386 128 HOH HOH . H 5 HOH A 87 1387 1 HOH HOH . H 5 HOH A 88 1388 124 HOH HOH . H 5 HOH A 89 1389 112 HOH HOH . H 5 HOH A 90 1390 166 HOH HOH . H 5 HOH A 91 1391 10 HOH HOH . H 5 HOH A 92 1392 123 HOH HOH . H 5 HOH A 93 1393 80 HOH HOH . H 5 HOH A 94 1394 6 HOH HOH . H 5 HOH A 95 1395 176 HOH HOH . H 5 HOH A 96 1396 66 HOH HOH . H 5 HOH A 97 1397 114 HOH HOH . H 5 HOH A 98 1398 49 HOH HOH . H 5 HOH A 99 1399 14 HOH HOH . H 5 HOH A 100 1400 120 HOH HOH . H 5 HOH A 101 1401 141 HOH HOH . H 5 HOH A 102 1402 81 HOH HOH . H 5 HOH A 103 1403 82 HOH HOH . H 5 HOH A 104 1404 155 HOH HOH . H 5 HOH A 105 1405 157 HOH HOH . H 5 HOH A 106 1406 101 HOH HOH . H 5 HOH A 107 1407 132 HOH HOH . H 5 HOH A 108 1408 102 HOH HOH . H 5 HOH A 109 1409 95 HOH HOH . H 5 HOH A 110 1410 85 HOH HOH . H 5 HOH A 111 1411 144 HOH HOH . H 5 HOH A 112 1412 153 HOH HOH . H 5 HOH A 113 1413 133 HOH HOH . H 5 HOH A 114 1414 94 HOH HOH . H 5 HOH A 115 1415 131 HOH HOH . H 5 HOH A 116 1416 84 HOH HOH . H 5 HOH A 117 1417 64 HOH HOH . H 5 HOH A 118 1418 142 HOH HOH . H 5 HOH A 119 1419 77 HOH HOH . H 5 HOH A 120 1420 163 HOH HOH . H 5 HOH A 121 1421 108 HOH HOH . H 5 HOH A 122 1422 152 HOH HOH . H 5 HOH A 123 1423 118 HOH HOH . H 5 HOH A 124 1424 121 HOH HOH . H 5 HOH A 125 1425 55 HOH HOH . H 5 HOH A 126 1426 147 HOH HOH . H 5 HOH A 127 1427 91 HOH HOH . H 5 HOH A 128 1428 110 HOH HOH . H 5 HOH A 129 1429 135 HOH HOH . H 5 HOH A 130 1430 115 HOH HOH . H 5 HOH A 131 1431 165 HOH HOH . H 5 HOH A 132 1432 150 HOH HOH . H 5 HOH A 133 1433 169 HOH HOH . H 5 HOH A 134 1434 158 HOH HOH . H 5 HOH A 135 1435 104 HOH HOH . H 5 HOH A 136 1436 173 HOH HOH . H 5 HOH A 137 1437 72 HOH HOH . H 5 HOH A 138 1438 89 HOH HOH . H 5 HOH A 139 1439 43 HOH HOH . H 5 HOH A 140 1440 78 HOH HOH . H 5 HOH A 141 1441 156 HOH HOH . H 5 HOH A 142 1442 143 HOH HOH . H 5 HOH A 143 1443 45 HOH HOH . H 5 HOH A 144 1444 97 HOH HOH . H 5 HOH A 145 1445 145 HOH HOH . H 5 HOH A 146 1446 149 HOH HOH . H 5 HOH A 147 1447 98 HOH HOH . H 5 HOH A 148 1448 107 HOH HOH . H 5 HOH A 149 1449 65 HOH HOH . H 5 HOH A 150 1450 138 HOH HOH . H 5 HOH A 151 1451 100 HOH HOH . H 5 HOH A 152 1452 146 HOH HOH . H 5 HOH A 153 1453 130 HOH HOH . H 5 HOH A 154 1454 37 HOH HOH . H 5 HOH A 155 1455 125 HOH HOH . H 5 HOH A 156 1456 172 HOH HOH . H 5 HOH A 157 1457 90 HOH HOH . H 5 HOH A 158 1458 67 HOH HOH . H 5 HOH A 159 1459 161 HOH HOH . H 5 HOH A 160 1460 38 HOH HOH . H 5 HOH A 161 1461 117 HOH HOH . H 5 HOH A 162 1462 99 HOH HOH . H 5 HOH A 163 1463 148 HOH HOH . H 5 HOH A 164 1464 136 HOH HOH . H 5 HOH A 165 1465 168 HOH HOH . H 5 HOH A 166 1466 177 HOH HOH . H 5 HOH A 167 1467 178 HOH HOH . H 5 HOH A 168 1468 70 HOH HOH . H 5 HOH A 169 1469 122 HOH HOH . H 5 HOH A 170 1470 68 HOH HOH . H 5 HOH A 171 1471 113 HOH HOH . H 5 HOH A 172 1472 111 HOH HOH . H 5 HOH A 173 1473 164 HOH HOH . H 5 HOH A 174 1474 154 HOH HOH . H 5 HOH A 175 1475 57 HOH HOH . H 5 HOH A 176 1476 159 HOH HOH . H 5 HOH A 177 1477 139 HOH HOH . H 5 HOH A 178 1478 174 HOH HOH . H 5 HOH A 179 1479 179 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 99E . . . B 2 -35.677 52.915 -3.4 1 19.73 ? O1 99E 1201 A 1 HETATM 2 C C11 99E . . . B 2 -36.433 51.721 -0.766 1 17.57 ? C11 99E 1201 A 1 HETATM 3 C C21 99E . . . B 2 -36.786 55.367 -0.252 1 17.03 ? C21 99E 1201 A 1 HETATM 4 C C7 99E . . . B 2 -32.48 50.436 -4.473 1 11.16 ? C7 99E 1201 A 1 HETATM 5 C C8 99E . . . B 2 -32.597 51.774 -5.171 1 10.9 ? C8 99E 1201 A 1 HETATM 6 C C10 99E . . . B 2 -29.248 50.364 -5.301 1 14.11 ? C10 99E 1201 A 1 HETATM 7 C C1 99E . . . B 2 -33.666 50.359 -1.431 1 13.57 ? C1 99E 1201 A 1 HETATM 8 C C2 99E . . . B 2 -32.239 50.595 -1.793 1 11.2 ? C2 99E 1201 A 1 HETATM 9 N N3 99E . . . B 2 -31.249 50.779 -0.902 1 13.57 ? N3 99E 1201 A 1 HETATM 10 C C4 99E . . . B 2 -30.051 50.955 -1.486 1 11.53 ? C4 99E 1201 A 1 HETATM 11 C C5 99E . . . B 2 -30.251 50.86 -2.956 1 11.29 ? C5 99E 1201 A 1 HETATM 12 C C6 99E . . . B 2 -31.705 50.609 -3.184 1 12.02 ? C6 99E 1201 A 1 HETATM 13 C C9 99E . . . B 2 -29.126 50.988 -3.942 1 11.83 ? C9 99E 1201 A 1 HETATM 14 C C12 99E . . . B 2 -28.767 51.194 -0.734 1 11.19 ? C12 99E 1201 A 1 HETATM 15 N N13 99E . . . B 2 -34.687 50.777 -2.184 1 16.56 ? N13 99E 1201 A 1 HETATM 16 O O15 99E . . . B 2 -33.851 49.769 -0.379 1 14.88 ? O15 99E 1201 A 1 HETATM 17 O O16 99E . . . B 2 -28.101 51.567 -3.62 1 11.04 ? O16 99E 1201 A 1 HETATM 18 C C3 99E . . . B 2 -36.065 50.615 -1.74 1 14.96 ? C3 99E 1201 A 1 HETATM 19 C C13 99E . . . B 2 -36.806 51.294 0.501 1 22.44 ? C13 99E 1201 A 1 HETATM 20 C C14 99E . . . B 2 -37.165 52.195 1.495 1 19.05 ? C14 99E 1201 A 1 HETATM 21 C C15 99E . . . B 2 -37.149 53.55 1.218 1 15.81 ? C15 99E 1201 A 1 HETATM 22 C C16 99E . . . B 2 -36.778 53.996 -0.043 1 15.88 ? C16 99E 1201 A 1 HETATM 23 C C17 99E . . . B 2 -36.408 53.103 -1.062 1 14.53 ? C17 99E 1201 A 1 HETATM 24 C C18 99E . . . B 2 -36.049 53.65 -2.311 1 17.2 ? C18 99E 1201 A 1 HETATM 25 C C19 99E . . . B 2 -36.058 55.027 -2.503 1 16.06 ? C19 99E 1201 A 1 HETATM 26 C C20 99E . . . B 2 -36.423 55.889 -1.483 1 17.03 ? C20 99E 1201 A 1 HETATM 27 O O22 99E . . . B 2 -36.823 49.961 0.788 1 25.34 ? O22 99E 1201 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 810 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 27 #