data_5NU3
#
_model_server_result.job_id            gVVS-bw0ECQqdwCg6DUD-Q 
_model_server_result.datetime_utc      '2024-11-28 05:19:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5nu3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1203}' 
#
_entry.id    5NU3 
#
_exptl.entry_id    5NU3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              90.121 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (R,R)-2,3-BUTANEDIOL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5NU3 
_cell.length_a            35.86 
_cell.length_b            49.24 
_cell.length_c            80.51 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5NU3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
#
_chem_comp.formula           'C4 H10 O2' 
_chem_comp.formula_weight    90.121 
_chem_comp.id                BU3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (R,R)-2,3-BUTANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O6 C3 BU3 sing 121 n n 
O6 HO6 BU3 sing 122 n n 
C3 C4 BU3 sing 123 n n 
C3 C2 BU3 sing 124 n n 
C3 H3 BU3 sing 125 n n 
C4 H41 BU3 sing 126 n n 
C4 H42 BU3 sing 127 n n 
C4 H43 BU3 sing 128 n n 
C2 O5 BU3 sing 129 n n 
C2 C1 BU3 sing 130 n n 
C2 H2 BU3 sing 131 n n 
O5 HO5 BU3 sing 132 n n 
C1 H11 BU3 sing 133 n n 
C1 H12 BU3 sing 134 n n 
C1 H13 BU3 sing 135 n n 
#
_atom_sites.entry_id                     5NU3 
_atom_sites.fract_transf_matrix[1][1]    0.027886 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020309 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012421 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 99E A 1 1201 1 99E 6S2 . 
C 3 BU3 A 1 1202 1 BU3 BU3 . 
D 3 BU3 A 1 1203 2 BU3 BU3 . 
E 3 BU3 A 1 1204 3 BU3 BU3 . 
F 3 BU3 A 1 1205 4 BU3 BU3 . 
G 4 SO4 A 1 1206 1 SO4 SO4 . 
H 5 HOH A 1 1301 151 HOH HOH . 
H 5 HOH A 2 1302 119 HOH HOH . 
H 5 HOH A 3 1303 175 HOH HOH . 
H 5 HOH A 4 1304 92 HOH HOH . 
H 5 HOH A 5 1305 162 HOH HOH . 
H 5 HOH A 6 1306 129 HOH HOH . 
H 5 HOH A 7 1307 167 HOH HOH . 
H 5 HOH A 8 1308 116 HOH HOH . 
H 5 HOH A 9 1309 140 HOH HOH . 
H 5 HOH A 10 1310 25 HOH HOH . 
H 5 HOH A 11 1311 29 HOH HOH . 
H 5 HOH A 12 1312 20 HOH HOH . 
H 5 HOH A 13 1313 48 HOH HOH . 
H 5 HOH A 14 1314 31 HOH HOH . 
H 5 HOH A 15 1315 28 HOH HOH . 
H 5 HOH A 16 1316 87 HOH HOH . 
H 5 HOH A 17 1317 2 HOH HOH . 
H 5 HOH A 18 1318 160 HOH HOH . 
H 5 HOH A 19 1319 88 HOH HOH . 
H 5 HOH A 20 1320 96 HOH HOH . 
H 5 HOH A 21 1321 58 HOH HOH . 
H 5 HOH A 22 1322 105 HOH HOH . 
H 5 HOH A 23 1323 86 HOH HOH . 
H 5 HOH A 24 1324 56 HOH HOH . 
H 5 HOH A 25 1325 83 HOH HOH . 
H 5 HOH A 26 1326 62 HOH HOH . 
H 5 HOH A 27 1327 12 HOH HOH . 
H 5 HOH A 28 1328 35 HOH HOH . 
H 5 HOH A 29 1329 39 HOH HOH . 
H 5 HOH A 30 1330 16 HOH HOH . 
H 5 HOH A 31 1331 33 HOH HOH . 
H 5 HOH A 32 1332 134 HOH HOH . 
H 5 HOH A 33 1333 46 HOH HOH . 
H 5 HOH A 34 1334 18 HOH HOH . 
H 5 HOH A 35 1335 47 HOH HOH . 
H 5 HOH A 36 1336 19 HOH HOH . 
H 5 HOH A 37 1337 61 HOH HOH . 
H 5 HOH A 38 1338 8 HOH HOH . 
H 5 HOH A 39 1339 74 HOH HOH . 
H 5 HOH A 40 1340 171 HOH HOH . 
H 5 HOH A 41 1341 127 HOH HOH . 
H 5 HOH A 42 1342 4 HOH HOH . 
H 5 HOH A 43 1343 79 HOH HOH . 
H 5 HOH A 44 1344 50 HOH HOH . 
H 5 HOH A 45 1345 53 HOH HOH . 
H 5 HOH A 46 1346 7 HOH HOH . 
H 5 HOH A 47 1347 170 HOH HOH . 
H 5 HOH A 48 1348 21 HOH HOH . 
H 5 HOH A 49 1349 69 HOH HOH . 
H 5 HOH A 50 1350 71 HOH HOH . 
H 5 HOH A 51 1351 59 HOH HOH . 
H 5 HOH A 52 1352 73 HOH HOH . 
H 5 HOH A 53 1353 22 HOH HOH . 
H 5 HOH A 54 1354 30 HOH HOH . 
H 5 HOH A 55 1355 126 HOH HOH . 
H 5 HOH A 56 1356 17 HOH HOH . 
H 5 HOH A 57 1357 54 HOH HOH . 
H 5 HOH A 58 1358 109 HOH HOH . 
H 5 HOH A 59 1359 51 HOH HOH . 
H 5 HOH A 60 1360 15 HOH HOH . 
H 5 HOH A 61 1361 75 HOH HOH . 
H 5 HOH A 62 1362 27 HOH HOH . 
H 5 HOH A 63 1363 52 HOH HOH . 
H 5 HOH A 64 1364 42 HOH HOH . 
H 5 HOH A 65 1365 3 HOH HOH . 
H 5 HOH A 66 1366 24 HOH HOH . 
H 5 HOH A 67 1367 76 HOH HOH . 
H 5 HOH A 68 1368 9 HOH HOH . 
H 5 HOH A 69 1369 32 HOH HOH . 
H 5 HOH A 70 1370 34 HOH HOH . 
H 5 HOH A 71 1371 40 HOH HOH . 
H 5 HOH A 72 1372 137 HOH HOH . 
H 5 HOH A 73 1373 13 HOH HOH . 
H 5 HOH A 74 1374 103 HOH HOH . 
H 5 HOH A 75 1375 60 HOH HOH . 
H 5 HOH A 76 1376 36 HOH HOH . 
H 5 HOH A 77 1377 106 HOH HOH . 
H 5 HOH A 78 1378 23 HOH HOH . 
H 5 HOH A 79 1379 44 HOH HOH . 
H 5 HOH A 80 1380 63 HOH HOH . 
H 5 HOH A 81 1381 11 HOH HOH . 
H 5 HOH A 82 1382 41 HOH HOH . 
H 5 HOH A 83 1383 93 HOH HOH . 
H 5 HOH A 84 1384 26 HOH HOH . 
H 5 HOH A 85 1385 5 HOH HOH . 
H 5 HOH A 86 1386 128 HOH HOH . 
H 5 HOH A 87 1387 1 HOH HOH . 
H 5 HOH A 88 1388 124 HOH HOH . 
H 5 HOH A 89 1389 112 HOH HOH . 
H 5 HOH A 90 1390 166 HOH HOH . 
H 5 HOH A 91 1391 10 HOH HOH . 
H 5 HOH A 92 1392 123 HOH HOH . 
H 5 HOH A 93 1393 80 HOH HOH . 
H 5 HOH A 94 1394 6 HOH HOH . 
H 5 HOH A 95 1395 176 HOH HOH . 
H 5 HOH A 96 1396 66 HOH HOH . 
H 5 HOH A 97 1397 114 HOH HOH . 
H 5 HOH A 98 1398 49 HOH HOH . 
H 5 HOH A 99 1399 14 HOH HOH . 
H 5 HOH A 100 1400 120 HOH HOH . 
H 5 HOH A 101 1401 141 HOH HOH . 
H 5 HOH A 102 1402 81 HOH HOH . 
H 5 HOH A 103 1403 82 HOH HOH . 
H 5 HOH A 104 1404 155 HOH HOH . 
H 5 HOH A 105 1405 157 HOH HOH . 
H 5 HOH A 106 1406 101 HOH HOH . 
H 5 HOH A 107 1407 132 HOH HOH . 
H 5 HOH A 108 1408 102 HOH HOH . 
H 5 HOH A 109 1409 95 HOH HOH . 
H 5 HOH A 110 1410 85 HOH HOH . 
H 5 HOH A 111 1411 144 HOH HOH . 
H 5 HOH A 112 1412 153 HOH HOH . 
H 5 HOH A 113 1413 133 HOH HOH . 
H 5 HOH A 114 1414 94 HOH HOH . 
H 5 HOH A 115 1415 131 HOH HOH . 
H 5 HOH A 116 1416 84 HOH HOH . 
H 5 HOH A 117 1417 64 HOH HOH . 
H 5 HOH A 118 1418 142 HOH HOH . 
H 5 HOH A 119 1419 77 HOH HOH . 
H 5 HOH A 120 1420 163 HOH HOH . 
H 5 HOH A 121 1421 108 HOH HOH . 
H 5 HOH A 122 1422 152 HOH HOH . 
H 5 HOH A 123 1423 118 HOH HOH . 
H 5 HOH A 124 1424 121 HOH HOH . 
H 5 HOH A 125 1425 55 HOH HOH . 
H 5 HOH A 126 1426 147 HOH HOH . 
H 5 HOH A 127 1427 91 HOH HOH . 
H 5 HOH A 128 1428 110 HOH HOH . 
H 5 HOH A 129 1429 135 HOH HOH . 
H 5 HOH A 130 1430 115 HOH HOH . 
H 5 HOH A 131 1431 165 HOH HOH . 
H 5 HOH A 132 1432 150 HOH HOH . 
H 5 HOH A 133 1433 169 HOH HOH . 
H 5 HOH A 134 1434 158 HOH HOH . 
H 5 HOH A 135 1435 104 HOH HOH . 
H 5 HOH A 136 1436 173 HOH HOH . 
H 5 HOH A 137 1437 72 HOH HOH . 
H 5 HOH A 138 1438 89 HOH HOH . 
H 5 HOH A 139 1439 43 HOH HOH . 
H 5 HOH A 140 1440 78 HOH HOH . 
H 5 HOH A 141 1441 156 HOH HOH . 
H 5 HOH A 142 1442 143 HOH HOH . 
H 5 HOH A 143 1443 45 HOH HOH . 
H 5 HOH A 144 1444 97 HOH HOH . 
H 5 HOH A 145 1445 145 HOH HOH . 
H 5 HOH A 146 1446 149 HOH HOH . 
H 5 HOH A 147 1447 98 HOH HOH . 
H 5 HOH A 148 1448 107 HOH HOH . 
H 5 HOH A 149 1449 65 HOH HOH . 
H 5 HOH A 150 1450 138 HOH HOH . 
H 5 HOH A 151 1451 100 HOH HOH . 
H 5 HOH A 152 1452 146 HOH HOH . 
H 5 HOH A 153 1453 130 HOH HOH . 
H 5 HOH A 154 1454 37 HOH HOH . 
H 5 HOH A 155 1455 125 HOH HOH . 
H 5 HOH A 156 1456 172 HOH HOH . 
H 5 HOH A 157 1457 90 HOH HOH . 
H 5 HOH A 158 1458 67 HOH HOH . 
H 5 HOH A 159 1459 161 HOH HOH . 
H 5 HOH A 160 1460 38 HOH HOH . 
H 5 HOH A 161 1461 117 HOH HOH . 
H 5 HOH A 162 1462 99 HOH HOH . 
H 5 HOH A 163 1463 148 HOH HOH . 
H 5 HOH A 164 1464 136 HOH HOH . 
H 5 HOH A 165 1465 168 HOH HOH . 
H 5 HOH A 166 1466 177 HOH HOH . 
H 5 HOH A 167 1467 178 HOH HOH . 
H 5 HOH A 168 1468 70 HOH HOH . 
H 5 HOH A 169 1469 122 HOH HOH . 
H 5 HOH A 170 1470 68 HOH HOH . 
H 5 HOH A 171 1471 113 HOH HOH . 
H 5 HOH A 172 1472 111 HOH HOH . 
H 5 HOH A 173 1473 164 HOH HOH . 
H 5 HOH A 174 1474 154 HOH HOH . 
H 5 HOH A 175 1475 57 HOH HOH . 
H 5 HOH A 176 1476 159 HOH HOH . 
H 5 HOH A 177 1477 139 HOH HOH . 
H 5 HOH A 178 1478 174 HOH HOH . 
H 5 HOH A 179 1479 179 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O6 BU3 . . . D 3 -37.41 63.018 10.405 1 28.14 ? O6 BU3 1203 A 1 
HETATM 2 C C3 BU3 . . . D 3 -36.436 62.76 11.428 1 29.77 ? C3 BU3 1203 A 1 
HETATM 3 C C4 BU3 . . . D 3 -36.934 63.305 12.764 1 30.54 ? C4 BU3 1203 A 1 
HETATM 4 C C2 BU3 . . . D 3 -35.106 63.381 11.013 1 26.5 ? C2 BU3 1203 A 1 
HETATM 5 O O5 BU3 . . . D 3 -34.649 62.741 9.814 1 23.33 ? O5 BU3 1203 A 1 
HETATM 6 C C1 BU3 . . . D 3 -34.05 63.241 12.106 1 27.28 ? C1 BU3 1203 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           318 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#