data_5NU6 # _model_server_result.job_id AtfNB9Mx5UJbiQfhTowxIw _model_server_result.datetime_utc '2024-11-24 20:42:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5nu6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5NU6 # _exptl.entry_id 5NU6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 256.424 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5NU6 _cell.length_a 102.58 _cell.length_b 102.58 _cell.length_c 73.282 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NU6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 4 A CYS 4 1_555 A SG CYS 160 A CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf2 A SG CYS 70 A CYS 70 1_555 A SG CYS 174 A CYS 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf3 A SG CYS 120 A CYS 120 1_555 A SG CYS 129 A CYS 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 260 n n C1 O2 PLM doub 261 n n C1 C2 PLM sing 262 n n O1 H PLM sing 263 n n C2 C3 PLM sing 264 n n C2 H21 PLM sing 265 n n C2 H22 PLM sing 266 n n C3 C4 PLM sing 267 n n C3 H31 PLM sing 268 n n C3 H32 PLM sing 269 n n C4 C5 PLM sing 270 n n C4 H41 PLM sing 271 n n C4 H42 PLM sing 272 n n C5 C6 PLM sing 273 n n C5 H51 PLM sing 274 n n C5 H52 PLM sing 275 n n C6 C7 PLM sing 276 n n C6 H61 PLM sing 277 n n C6 H62 PLM sing 278 n n C7 C8 PLM sing 279 n n C7 H71 PLM sing 280 n n C7 H72 PLM sing 281 n n C8 C9 PLM sing 282 n n C8 H81 PLM sing 283 n n C8 H82 PLM sing 284 n n C9 CA PLM sing 285 n n C9 H91 PLM sing 286 n n C9 H92 PLM sing 287 n n CA CB PLM sing 288 n n CA HA1 PLM sing 289 n n CA HA2 PLM sing 290 n n CB CC PLM sing 291 n n CB HB1 PLM sing 292 n n CB HB2 PLM sing 293 n n CC CD PLM sing 294 n n CC HC1 PLM sing 295 n n CC HC2 PLM sing 296 n n CD CE PLM sing 297 n n CD HD1 PLM sing 298 n n CD HD2 PLM sing 299 n n CE CF PLM sing 300 n n CE HE1 PLM sing 301 n n CE HE2 PLM sing 302 n n CF CG PLM sing 303 n n CF HF1 PLM sing 304 n n CF HF2 PLM sing 305 n n CG HG1 PLM sing 306 n n CG HG2 PLM sing 307 n n CG HG3 PLM sing 308 n n # _atom_sites.entry_id 5NU6 _atom_sites.fract_transf_matrix[1][1] 0.009748 _atom_sites.fract_transf_matrix[1][2] 0.005628 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011257 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013646 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PLM A 1 201 183 PLM PLM . C 3 CL A 1 202 193 CL CL . D 3 CL A 1 203 194 CL CL . E 4 HOH A 1 301 280 HOH HOH . E 4 HOH A 2 302 240 HOH HOH . E 4 HOH A 3 303 277 HOH HOH . E 4 HOH A 4 304 281 HOH HOH . E 4 HOH A 5 305 216 HOH HOH . E 4 HOH A 6 306 223 HOH HOH . E 4 HOH A 7 307 253 HOH HOH . E 4 HOH A 8 308 220 HOH HOH . E 4 HOH A 9 309 222 HOH HOH . E 4 HOH A 10 310 243 HOH HOH . E 4 HOH A 11 311 252 HOH HOH . E 4 HOH A 12 312 246 HOH HOH . E 4 HOH A 13 313 226 HOH HOH . E 4 HOH A 14 314 235 HOH HOH . E 4 HOH A 15 315 236 HOH HOH . E 4 HOH A 16 316 245 HOH HOH . E 4 HOH A 17 317 260 HOH HOH . E 4 HOH A 18 318 224 HOH HOH . E 4 HOH A 19 319 264 HOH HOH . E 4 HOH A 20 320 207 HOH HOH . E 4 HOH A 21 321 261 HOH HOH . E 4 HOH A 22 322 248 HOH HOH . E 4 HOH A 23 323 203 HOH HOH . E 4 HOH A 24 324 285 HOH HOH . E 4 HOH A 25 325 217 HOH HOH . E 4 HOH A 26 326 201 HOH HOH . E 4 HOH A 27 327 289 HOH HOH . E 4 HOH A 28 328 221 HOH HOH . E 4 HOH A 29 329 251 HOH HOH . E 4 HOH A 30 330 232 HOH HOH . E 4 HOH A 31 331 256 HOH HOH . E 4 HOH A 32 332 215 HOH HOH . E 4 HOH A 33 333 213 HOH HOH . E 4 HOH A 34 334 204 HOH HOH . E 4 HOH A 35 335 231 HOH HOH . E 4 HOH A 36 336 219 HOH HOH . E 4 HOH A 37 337 241 HOH HOH . E 4 HOH A 38 338 255 HOH HOH . E 4 HOH A 39 339 229 HOH HOH . E 4 HOH A 40 340 273 HOH HOH . E 4 HOH A 41 341 262 HOH HOH . E 4 HOH A 42 342 208 HOH HOH . E 4 HOH A 43 343 257 HOH HOH . E 4 HOH A 44 344 228 HOH HOH . E 4 HOH A 45 345 210 HOH HOH . E 4 HOH A 46 346 202 HOH HOH . E 4 HOH A 47 347 214 HOH HOH . E 4 HOH A 48 348 227 HOH HOH . E 4 HOH A 49 349 233 HOH HOH . E 4 HOH A 50 350 254 HOH HOH . E 4 HOH A 51 351 258 HOH HOH . E 4 HOH A 52 352 259 HOH HOH . E 4 HOH A 53 353 237 HOH HOH . E 4 HOH A 54 354 211 HOH HOH . E 4 HOH A 55 355 239 HOH HOH . E 4 HOH A 56 356 238 HOH HOH . E 4 HOH A 57 357 209 HOH HOH . E 4 HOH A 58 358 234 HOH HOH . E 4 HOH A 59 359 244 HOH HOH . E 4 HOH A 60 360 206 HOH HOH . E 4 HOH A 61 361 230 HOH HOH . E 4 HOH A 62 362 270 HOH HOH . E 4 HOH A 63 363 274 HOH HOH . E 4 HOH A 64 364 249 HOH HOH . E 4 HOH A 65 365 271 HOH HOH . E 4 HOH A 66 366 225 HOH HOH . E 4 HOH A 67 367 212 HOH HOH . E 4 HOH A 68 368 276 HOH HOH . E 4 HOH A 69 369 265 HOH HOH . E 4 HOH A 70 370 269 HOH HOH . E 4 HOH A 71 371 263 HOH HOH . E 4 HOH A 72 372 272 HOH HOH . E 4 HOH A 73 373 278 HOH HOH . E 4 HOH A 74 374 283 HOH HOH . E 4 HOH A 75 375 286 HOH HOH . E 4 HOH A 76 376 275 HOH HOH . E 4 HOH A 77 377 247 HOH HOH . E 4 HOH A 78 378 288 HOH HOH . E 4 HOH A 79 379 279 HOH HOH . E 4 HOH A 80 380 266 HOH HOH . E 4 HOH A 81 381 284 HOH HOH . E 4 HOH A 82 382 268 HOH HOH . E 4 HOH A 83 383 287 HOH HOH . E 4 HOH A 84 384 282 HOH HOH . E 4 HOH A 85 385 205 HOH HOH . E 4 HOH A 86 386 267 HOH HOH . E 4 HOH A 87 387 250 HOH HOH . E 4 HOH A 88 388 242 HOH HOH . E 4 HOH A 89 389 218 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . B 2 11.74 12.243 2.731 1 33.06 ? C1 PLM 201 A 1 HETATM 2 O O1 PLM . . . B 2 12.341 11.453 3.485 1 39.23 ? O1 PLM 201 A 1 HETATM 3 O O2 PLM . . . B 2 10.778 12.974 3.057 1 35.73 ? O2 PLM 201 A 1 HETATM 4 C C2 PLM . . . B 2 12.195 12.332 1.298 1 39.12 ? C2 PLM 201 A 1 HETATM 5 C C3 PLM . . . B 2 13.177 11.195 1.053 1 51.34 ? C3 PLM 201 A 1 HETATM 6 C C4 PLM . . . B 2 12.296 9.982 0.794 1 44 ? C4 PLM 201 A 1 HETATM 7 C C5 PLM . . . B 2 13.112 9.008 -0.053 1 49.29 ? C5 PLM 201 A 1 HETATM 8 C C6 PLM . . . B 2 14.09 8.401 0.916 1 52.14 ? C6 PLM 201 A 1 HETATM 9 C C7 PLM . . . B 2 14.163 6.91 0.633 1 48.87 ? C7 PLM 201 A 1 HETATM 10 C C8 PLM . . . B 2 15.653 6.704 0.415 1 64.3 ? C8 PLM 201 A 1 HETATM 11 C C9 PLM . . . B 2 15.818 5.28 -0.08 1 49.12 ? C9 PLM 201 A 1 HETATM 12 C CA PLM . . . B 2 17.231 4.903 0.333 1 68.56 ? CA PLM 201 A 1 HETATM 13 C CB PLM . . . B 2 18.119 5.916 -0.351 1 49.3 ? CB PLM 201 A 1 HETATM 14 C CC PLM . . . B 2 18.978 6.482 0.753 1 56.11 ? CC PLM 201 A 1 HETATM 15 C CD PLM . . . B 2 19.764 7.596 0.107 1 52.39 ? CD PLM 201 A 1 HETATM 16 C CE PLM . . . B 2 19.58 8.782 1.031 1 46.7 ? CE PLM 201 A 1 HETATM 17 C CF PLM . . . B 2 18.091 9.003 1.092 1 46.74 ? CF PLM 201 A 1 HETATM 18 C CG PLM . . . B 2 17.872 10.131 0.078 1 40.51 ? CG PLM 201 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 18 #